version 1.0
Chlorobium phaeobacteroides DSM 266, complete genome - 1..3133902 2650 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 8 51.25 0 8358..9194 + 278 119355865 - Cpha266_0009 - IstB ATP binding domain-containing protein 9 45.39 0 9405..9935 - 176 119355866 - Cpha266_0011 - hypothetical protein 10 43.72 -1 10369..11061 - 230 119355867 - Cpha266_0013 - transposase 11 44.75 0 11058..11600 - 180 119355868 - Cpha266_0014 - hypothetical protein 12 46.38 0 11704..12462 + 252 119355869 - Cpha266_0015 - transposase, IS4 family protein 13 55.51 +1 12686..14092 + 468 119355870 - Cpha266_0017 - transposase, IS4 family protein 14 49.34 0 14359..15489 - 376 119355871 - Cpha266_0018 - transposase 15 55.51 +1 16159..17565 + 468 119355872 - Cpha266_0019 - transposase, IS4 family protein 16 40.16 -1 17769..18017 + 82 119355873 - Cpha266_0020 - hypothetical protein 17 40.30 -1 18030..18560 + 176 119355874 - Cpha266_0021 - hypothetical protein 18 48.28 0 20845..22209 - 454 119355875 - Cpha266_0024 - transposase 19 40.85 -1 23043..24266 - 407 119355876 - Cpha266_0026 - beta-lactamase domain-containing protein 20 42.45 -1 24550..26940 - 796 119355877 - Cpha266_0027 - DNA polymerase B region 21 47.80 0 27338..29203 - 621 119355878 - Cpha266_0028 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 22 48.01 0 29664..30065 + 133 119355879 - Cpha266_0029 - thiosulfate-binding protein SoxY 23 43.43 -1 30107..30403 + 98 119355880 - Cpha266_0030 - sulfur oxidation protein SoxZ 24 48.03 0 30479..30859 + 126 119355881 - Cpha266_0031 - sulfide dehydrogenase (flavocytochrome), cytochrome c subunit 25 50.50 0 30874..32166 + 430 119355882 - Cpha266_0032 - sulfide dehydrogenase (flavocytochrome), flavoprotein subunit 26 50.65 0 32395..34254 + 619 119355883 secD Cpha266_0033 - preprotein translocase subunit SecD 27 46.15 0 34277..35212 + 311 119355884 secF Cpha266_0034 - preprotein translocase subunit SecF 28 45.63 0 35469..36785 + 438 119355885 - Cpha266_0035 - PpiC-type peptidyl-prolyl cis-trans isomerase 29 47.93 0 36774..38705 - 643 119355886 - Cpha266_0036 - DNA gyrase subunit B 30 47.40 0 38787..39170 - 127 119355887 - Cpha266_0037 - hypothetical protein 31 52.75 0 39180..39797 - 205 119355888 - Cpha266_0038 - ribonuclease H 32 50.00 0 39830..40219 - 129 119355889 - Cpha266_0039 - hypothetical protein 33 49.41 0 40727..42424 + 565 119355890 - Cpha266_0040 - ribonuclease 34 52.55 0 42441..43304 + 287 119355891 dapD Cpha266_0041 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 35 50.79 0 43349..45067 + 572 119355892 - Cpha266_0042 - C-terminal processing peptidase-3 36 49.72 0 45059..45778 - 239 119355893 - Cpha266_0043 - hypothetical protein 37 51.44 0 45810..46952 - 380 119355894 - Cpha266_0044 - geranylgeranyl reductase 38 51.22 0 46993..48462 - 489 119355895 - Cpha266_0045 - glycyl-tRNA synthetase 39 51.26 0 48703..49020 - 105 119355896 - Cpha266_0046 - ATP-dependent Clp protease adaptor protein ClpS 40 52.98 0 49083..50054 - 323 119355897 - Cpha266_0047 - muramoyltetrapeptide carboxypeptidase 41 46.82 0 50094..50360 - 88 119355898 - Cpha266_0048 - H+-transporting two-sector ATPase, delta/epsilon subunit 42 51.62 0 50376..51764 - 462 119355899 - Cpha266_0049 - F0F1 ATP synthase subunit beta 43 49.54 0 52157..52699 + 180 119355900 - Cpha266_0050 - redoxin domain-containing protein 44 52.95 0 52835..54700 + 621 119355901 - Cpha266_0051 - phosphoenolpyruvate carboxykinase 45 47.60 0 54772..55500 + 242 119355902 - Cpha266_0052 - hypothetical protein 46 53.06 0 55586..57445 - 619 119355903 - Cpha266_0053 - ATP-dependent DNA helicase RecQ 47 51.72 0 59048..59395 - 115 119355904 - Cpha266_0054 - hypothetical protein 48 49.92 0 59403..60692 - 429 119355905 - Cpha266_0055 - radical SAM domain-containing protein 49 51.73 0 60768..62186 - 472 119355906 - Cpha266_0056 - peptidase M12A, astacin 50 58.94 +2 62761..65244 + 827 119355907 - Cpha266_0057 - hypothetical protein 51 57.56 +1 65249..66577 + 442 119355908 - Cpha266_0058 - protein of unknown function DUF900, hydrolase family protein 52 50.68 0 66590..67027 - 145 119355909 - Cpha266_0059 - SH3 type 3 domain-containing protein 53 56.72 +1 67352..68095 + 247 119355910 - Cpha266_0060 - TetR family transcriptional regulator 54 55.05 +1 68108..68572 + 154 119355911 - Cpha266_0061 - putative transmembrane protein 55 56.12 +1 68569..69876 + 435 119355912 - Cpha266_0062 - NADPH-dependent FMN reductase 56 55.45 +1 70230..72956 + 908 119355913 - Cpha266_0063 - hypothetical protein 57 53.78 +1 73902..74390 + 162 119355914 - Cpha266_0064 - hypothetical protein 58 40.72 -1 74997..75524 + 175 119355915 - Cpha266_0065 - hypothetical protein 59 35.71 -2 75533..76708 + 391 119355916 - Cpha266_0066 - hypothetical protein 60 45.33 0 76875..77174 + 99 119355917 - Cpha266_0067 - hypothetical protein 61 48.38 0 77474..81076 - 1200 119355918 - Cpha266_0068 - hypothetical protein 62 49.14 0 81122..81469 - 115 119355919 - Cpha266_0069 - hypothetical protein 63 48.68 0 81714..81941 + 75 119355920 - Cpha266_0070 - CopG family protein 64 46.73 0 82008..83015 - 335 119355921 - Cpha266_0071 - helix-turn-helix domain-containing protein 65 44.09 -1 82993..83373 - 126 119355922 - Cpha266_0072 - hypothetical protein 66 51.63 0 83897..85186 + 429 119355923 - Cpha266_0073 - DNA methylase N-4/N-6 domain-containing protein 67 46.89 0 85239..85511 - 90 119355924 - Cpha266_0074 - hypothetical protein 68 46.41 0 85805..86278 - 157 119355925 - Cpha266_0075 - hypothetical protein 69 50.89 0 86782..88353 + 523 119355926 - Cpha266_0076 - integrase catalytic subunit 70 51.25 0 88359..89195 + 278 119355927 - Cpha266_0077 - IstB ATP binding domain-containing protein 71 37.25 -2 89710..91446 - 578 119355928 - Cpha266_0078 - hypothetical protein 72 40.05 -1 91430..94393 - 987 119355929 - Cpha266_0079 - histidine kinase 73 43.91 -1 94386..95501 - 371 119355930 - Cpha266_0080 - DNA-cytosine methyltransferase 74 50.77 0 95816..97117 - 433 119355931 - Cpha266_0081 - hypothetical protein 75 50.28 0 97065..97595 - 176 119355932 - Cpha266_0082 - T/G mismatch-specific endonuclease 76 49.22 0 97588..98865 - 425 119355933 - Cpha266_0083 - DNA-cytosine methyltransferase 77 53.60 +1 99268..100713 - 481 119355934 - Cpha266_0084 - hypothetical protein 78 53.31 +1 100871..101596 - 241 119355935 - Cpha266_0085 - 4'-phosphopantetheinyl transferase 79 57.29 +1 102059..102997 - 312 119355936 - Cpha266_0086 - hypothetical protein 80 54.69 +1 103347..104657 + 436 119355937 - Cpha266_0087 - major facilitator transporter 81 53.89 +1 104732..105310 - 192 119355938 - Cpha266_0088 - hypothetical protein 82 49.75 0 105373..105780 - 135 119355939 - Cpha266_0089 - Gifsy-1 prophage protein 83 56.17 +1 106136..106678 + 180 119355940 - Cpha266_0090 - methionine-R-sulfoxide reductase 84 48.62 0 106689..107087 - 132 119355941 - Cpha266_0091 - PilT domain-containing protein 85 48.75 0 107084..107362 - 92 119355942 - Cpha266_0092 - virulence associated protein B 86 56.74 +1 107423..108994 - 523 119355943 - Cpha266_0093 - EmrB/QacA family drug resistance transporter 87 56.74 +1 109147..110133 - 328 119355944 - Cpha266_0094 - secretion protein HlyD family protein 88 53.38 +1 110135..110608 - 157 119355945 - Cpha266_0095 - UspA domain-containing protein 89 54.75 +1 110611..111936 - 441 119355946 - Cpha266_0096 - outer membrane efflux protein 90 53.81 +1 112186..114285 + 699 119355947 - Cpha266_0097 - Fis family transcriptional regulator 91 53.94 +1 114296..115678 - 460 119355948 - Cpha266_0098 - hypothetical protein 92 47.30 0 115662..115976 - 104 119355949 - Cpha266_0099 - hypothetical protein 93 54.26 +1 116027..116800 - 257 119355950 - Cpha266_0100 - succinate dehydrogenase/fumarate reductase iron-sulfur subunit 94 52.81 0 116807..118783 - 658 119355951 sdhA Cpha266_0101 - succinate dehydrogenase flavoprotein subunit 95 46.50 0 118798..119526 - 242 119355952 - Cpha266_0102 - succinate dehydrogenase subunit C 96 52.83 0 119559..120194 - 211 119355953 - Cpha266_0103 - cyclase family protein 97 49.71 0 120331..120849 + 172 119355954 - Cpha266_0104 - hypothetical protein 98 51.77 0 120911..121306 + 131 119355955 - Cpha266_0105 - histidine triad (HIT) protein 99 54.93 +1 121365..124133 + 922 119355956 - Cpha266_0106 - aconitase 100 52.04 0 124222..124515 + 97 119355957 - Cpha266_0107 - FeoA family protein 101 49.65 0 124512..126650 + 712 119355958 - Cpha266_0108 - ferrous iron transport protein B 102 51.71 0 126637..129036 - 799 119355959 - Cpha266_0109 - DNA topoisomerase I 103 50.93 0 129197..130975 + 592 119355960 - Cpha266_0110 - N-acetylmuramoyl-L-alanine amidase 104 53.09 0 131086..132072 + 328 119355961 - Cpha266_0111 - biotin--acetyl-CoA-carboxylase ligase 105 52.37 0 132085..133098 + 337 119355962 - Cpha266_0112 - biotin synthase 106 54.26 +1 133086..134270 + 394 119355963 - Cpha266_0113 - 8-amino-7-oxononanoate synthase 107 53.28 +1 134275..134961 + 228 119355964 - Cpha266_0114 - hypothetical protein 48.61 MEAN 4.51 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.