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Chlorobium phaeobacteroides DSM 266, complete genome - 1..3133902 2650 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 471 44.06 -1 538882..539487 + 201 119356328 hisH Cpha266_0491 - imidazole glycerol phosphate synthase subunit HisH 472 46.82 0 539510..540280 + 256 119356329 - Cpha266_0492 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 473 48.93 0 540334..540942 + 202 119356330 - Cpha266_0493 - condensin subunit ScpB 474 49.73 0 540958..541689 + 243 119356331 - Cpha266_0494 - ribosomal large subunit pseudouridine synthase B 475 50.58 0 541738..543801 + 687 119356332 - Cpha266_0495 - hypothetical protein 476 52.16 0 543798..544769 - 323 119356333 - Cpha266_0496 - translation factor SUA5 477 50.22 0 544787..545467 - 226 119356334 - Cpha266_0497 - phosphatidate cytidylyltransferase 478 49.11 0 546143..547708 + 521 119356335 - Cpha266_0498 - Ppx/GppA phosphatase 479 50.27 0 547701..549548 + 615 119356336 - Cpha266_0499 - para-aminobenzoate synthase, subunit I 480 48.37 0 549630..550088 + 152 119356337 - Cpha266_0500 - hypothetical protein 481 49.31 0 550085..550735 - 216 119356338 - Cpha266_0501 - DNA-(apurinic or apyrimidinic site) lyase / endonuclease III 482 44.18 0 550738..551235 - 165 119356339 - Cpha266_0502 - NusB antitermination factor 483 49.06 0 551255..551947 - 230 119356340 - Cpha266_0503 - hydrolase 484 47.63 0 551964..555503 - 1179 119356341 - Cpha266_0504 - chromosome segregation protein SMC 485 52.85 0 555596..556507 - 303 119356342 - Cpha266_0505 - dihydropteroate synthase 486 51.19 0 556504..557556 - 350 119356343 - Cpha266_0506 - peptidase M50 487 53.33 +1 557735..558184 - 149 119356344 - Cpha266_0507 - cytochrome c, putative 488 48.79 0 558304..559254 - 316 119356345 - Cpha266_0508 - methyltransferase type 12 489 48.08 0 559546..560040 + 164 119356346 - Cpha266_0509 - BadM/Rrf2 family transcriptional regulator 490 53.17 +1 560037..560918 + 293 119356347 - Cpha266_0510 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 491 53.09 0 560937..561341 + 134 119356348 - Cpha266_0511 - TPR repeat-containing protein 492 50.28 0 561372..562994 + 540 119356349 - Cpha266_0512 - hydroxylamine reductase 493 48.20 0 563148..563564 + 138 119356350 - Cpha266_0513 - NUDIX hydrolase 494 48.10 0 563847..565085 + 412 119356351 - Cpha266_0514 - major facilitator transporter 495 45.54 0 565197..565802 + 201 119356352 - Cpha266_0515 - hypothetical protein 496 43.98 -1 565905..566627 - 240 119356353 - Cpha266_0516 - hypothetical protein 497 49.36 0 566631..569519 - 962 119356354 - Cpha266_0517 - excinuclease ABC subunit A 498 49.73 0 570003..572825 - 940 119356355 - Cpha266_0518 - pyruvate phosphate dikinase 499 52.27 0 572905..573786 + 293 119356356 - Cpha266_0519 - inner-membrane translocator 500 49.77 0 573778..574434 - 218 119356357 - Cpha266_0520 - isoprenoid biosynthesis protein 501 48.08 0 574763..575257 + 164 119356358 - Cpha266_0521 - hypothetical protein 502 44.58 0 575861..577087 + 408 119356359 - Cpha266_0522 - sigma-70, region 4 type 2 503 50.89 0 577162..577833 + 223 119356360 - Cpha266_0523 - hypothetical protein 504 47.14 0 578072..578578 - 168 119356361 - Cpha266_0524 - hypothetical protein 505 48.25 0 578698..579240 + 180 119356362 - Cpha266_0525 - isochorismatase hydrolase 506 47.85 0 579252..580319 - 355 119356363 - Cpha266_0526 - lipid-A-disaccharide synthase 507 46.34 0 580309..580923 - 204 119356364 - Cpha266_0527 - hypothetical protein 508 51.01 0 581100..582383 + 427 119356365 - Cpha266_0528 - phosphoribosylamine--glycine ligase 509 46.99 0 582406..582837 + 143 119356366 - Cpha266_0529 - hypothetical protein 510 48.75 0 582925..584403 + 492 119356367 - Cpha266_0530 - carbamoyl-phosphate synthase large subunit 511 49.68 0 584409..585185 + 258 119356368 - Cpha266_0531 - indole-3-glycerol phosphate synthase 512 47.75 0 585166..585831 - 221 119356369 - Cpha266_0532 - ribulose-5-phosphate 3-epimerase 513 46.42 0 585881..588112 - 743 119356370 - Cpha266_0533 - surface antigen (D15) 514 45.18 0 588131..588358 - 75 119356371 - Cpha266_0534 - hypothetical protein 515 44.22 0 588391..589134 - 247 119356372 - Cpha266_0535 - peptidase M23B 516 46.43 0 589218..592058 - 946 119356373 - Cpha266_0536 - DNA polymerase I 517 47.02 0 592055..592894 - 279 119356374 - Cpha266_0537 - prephenate dehydratase 518 44.22 0 593014..593766 + 250 119356375 - Cpha266_0538 - hypothetical protein 519 50.53 0 593770..594333 + 187 119356376 - Cpha266_0539 - crossover junction endodeoxyribonuclease RuvC 520 45.23 0 594433..594987 + 184 119356377 - Cpha266_0540 - CDP-alcohol phosphatidyltransferase 521 48.93 0 595389..596792 - 467 119356378 - Cpha266_0541 - bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase 522 46.90 0 596919..598754 - 611 119356379 - Cpha266_0542 - ABC-type branched-chain amino acid transport systems periplasmic component-like 523 48.36 0 598767..599558 - 263 119356380 - Cpha266_0543 - inositol-phosphate phosphatase 524 45.83 0 599791..600270 + 159 119356381 - Cpha266_0544 - TspO and MBR like proteins 525 44.08 -1 600846..601301 + 151 119356382 - Cpha266_0545 - hypothetical protein 526 45.54 0 601546..608001 + 2151 119356383 - Cpha266_0546 - amino acid adenylation domain-containing protein 527 45.36 0 608005..608736 + 243 119356384 - Cpha266_0547 - 4'-phosphopantetheinyl transferase 528 45.11 0 609777..610328 - 183 119356385 - Cpha266_0549 - hypothetical protein 529 50.75 0 610511..612514 - 667 119356386 - Cpha266_0550 - acetyl-CoA synthetase 530 47.08 0 612695..615145 - 816 119356387 leuS Cpha266_0551 - leucyl-tRNA synthetase 531 50.75 0 615226..617424 - 732 119356388 - Cpha266_0552 - polynucleotide phosphorylase/polyadenylase 532 51.17 0 617598..618449 - 283 119356389 - Cpha266_0553 - pantothenate synthetase 533 47.76 0 618433..619167 - 244 119356390 - Cpha266_0554 - uroporphyrin-III C/tetrapyrrole methyltransferase 534 48.78 0 619263..620246 + 327 119356391 - Cpha266_0555 - oligopeptide/dipeptide ABC transporter, ATPase subunit 535 51.00 0 620290..622095 + 601 119356392 - Cpha266_0556 - signal peptide peptidase A 536 53.72 +1 622165..623577 - 470 119356393 - Cpha266_0557 - hypothetical protein 537 52.47 0 623904..625460 - 518 119356394 - Cpha266_0558 - Mg chelatase, subunit ChlI 538 51.68 0 625602..628370 - 922 119356395 - Cpha266_0559 - phosphoenolpyruvate carboxylase 539 47.82 0 628707..629348 + 213 119356396 - Cpha266_0560 - photosystem P840 reaction center cytochrome c-551 540 44.44 0 629489..629839 - 116 119356397 - Cpha266_0561 - 7-cyano-7-deazaguanine reductase 541 49.72 0 630005..630724 + 239 119356398 - Cpha266_0562 - methyltransferase type 12 542 50.29 0 630721..631581 + 286 119356399 - Cpha266_0563 - hypothetical protein 543 45.29 0 631578..632564 + 328 119356400 - Cpha266_0564 - tyrosine recombinase XerC subunit 544 42.90 -1 632641..632964 + 107 119356401 - Cpha266_0565 - hypothetical protein 545 44.79 0 633049..634017 + 322 119356402 - Cpha266_0566 - HPr kinase/phosphorylase 546 45.81 0 634030..635856 + 608 119356403 - Cpha266_0567 - extracellular solute-binding protein 547 46.07 0 635866..636831 + 321 119356404 - Cpha266_0568 - binding-protein-dependent transport systems inner membrane component 548 47.93 0 636859..637899 + 346 119356405 ruvB Cpha266_0569 - Holliday junction DNA helicase B 549 44.03 -1 637880..639655 + 591 119356406 - Cpha266_0570 - TPR repeat-containing protein 550 48.86 0 639741..643301 - 1186 119356407 - Cpha266_0571 - pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 551 49.14 0 643595..644353 + 252 119356408 - Cpha266_0572 - RNA methyltransferase 552 50.00 0 644478..644861 + 127 119356409 - Cpha266_0573 - glycine cleavage system H protein 553 49.81 0 644897..646231 + 444 119356410 - Cpha266_0574 - glycine dehydrogenase subunit 1 554 48.82 0 646224..647114 - 296 119356411 - Cpha266_0575 - dihydrodipicolinate synthase 555 48.45 0 647180..648886 - 568 119356412 - Cpha266_0576 - DNA repair protein RecN 556 43.43 -1 649264..649461 - 65 119356413 - Cpha266_0577 - twin arginine-targeting protein translocase 557 48.98 0 649572..650210 - 212 119356414 - Cpha266_0578 - phosphatidylserine decarboxylase 558 47.24 0 650316..651293 + 325 119356415 - Cpha266_0579 - tRNA(Ile)-lysidine synthetase 559 46.92 0 651356..652393 - 345 119356416 - Cpha266_0580 - hypothetical protein 560 46.94 0 652406..652846 - 146 119356417 rnhA Cpha266_0581 - ribonuclease H 561 42.92 -1 652925..653143 - 72 119356418 rpmB Cpha266_0582 - 50S ribosomal protein L28 562 48.91 0 653217..654179 - 320 119356419 - Cpha266_0583 - bacteriochlorophyll/chlorophyll a synthase 563 51.70 0 654284..655339 - 351 119356420 - Cpha266_0584 - anthranilate phosphoribosyltransferase 564 49.59 0 655461..656555 + 364 119356421 - Cpha266_0585 - peptidase M24 565 49.33 0 656575..656949 + 124 119356422 - Cpha266_0586 - CutA1 divalent ion tolerance protein 566 49.79 0 656942..658108 - 388 119356423 - Cpha266_0587 - DNA-directed DNA polymerase 567 48.03 0 658124..659035 - 303 119356424 - Cpha266_0588 - branched-chain amino acid aminotransferase 568 48.84 0 659232..660437 - 401 119356425 - Cpha266_0589 - 6-phosphofructokinase 569 46.90 0 660615..661889 + 424 119356426 - Cpha266_0590 - hypothetical protein 570 49.27 0 661886..662362 - 158 119356427 - Cpha266_0591 - 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 48.61 MEAN 4.51 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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