version 1.0
Chlorobium phaeobacteroides DSM 266, complete genome - 1..3133902 2650 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1428 44.37 0 1675786..1676220 + 144 119357285 - Cpha266_1478 - transposase 1429 41.83 -1 1677027..1678238 + 403 119357286 - Cpha266_1480 - hypothetical protein 1430 51.39 0 1678623..1679879 - 418 119357287 - Cpha266_1481 - RNA-directed DNA polymerase (Reverse transcriptase) 1431 49.90 0 1680674..1682248 + 524 119357288 - Cpha266_1482 - integrase catalytic subunit 1432 49.67 0 1682263..1683009 + 248 119357289 - Cpha266_1483 - IstB ATP binding domain-containing protein 1433 58.11 +2 1683110..1683997 - 295 119357290 - Cpha266_1484 - hypothetical protein 1434 52.14 0 1684063..1684833 - 256 119357291 - Cpha266_1485 - putative reverse transcriptase/maturase family protein 1435 57.30 +1 1685483..1686454 - 323 119357292 - Cpha266_1487 - hypothetical protein 1436 48.28 0 1687238..1688254 + 338 119357293 - Cpha266_1489 - regulatory protein, ArsR 1437 42.31 -1 1688873..1691101 - 742 119357294 - Cpha266_1490 - hypothetical protein 1438 53.56 +1 1691163..1692650 - 495 119357295 - Cpha266_1491 - N-6 DNA methylase 1439 41.60 -1 1692656..1694095 - 479 119357296 - Cpha266_1492 - restriction modification system DNA specificity subunit 1440 53.14 +1 1694118..1694849 - 243 119357297 - Cpha266_1493 - phage Gp37Gp68 family protein 1441 30.64 -2 1694849..1695961 - 370 119357298 - Cpha266_1494 - hypothetical protein 1442 54.29 +1 1695958..1698753 - 931 119357299 - Cpha266_1495 - type III restriction enzyme, res subunit 1443 30.81 -2 1699062..1699616 - 184 119357300 - Cpha266_1496 - hypothetical protein 1444 55.72 +1 1701458..1702252 - 264 119357301 - Cpha266_1499 - hypothetical protein 1445 56.28 +1 1702276..1702458 - 60 119357302 - Cpha266_1500 - hypothetical protein 1446 53.35 +1 1702470..1704038 - 522 119357303 - Cpha266_1501 - hypothetical protein 1447 52.77 0 1704041..1704889 - 282 119357304 - Cpha266_1502 - Type II site-specific deoxyribonuclease 1448 49.56 0 1705018..1705356 - 112 119357305 - Cpha266_1503 - hypothetical protein 1449 49.51 0 1705417..1705923 - 168 119357306 - Cpha266_1504 - PilT domain-containing protein 1450 50.09 0 1705920..1707071 - 383 119357307 - Cpha266_1505 - hypothetical protein 1451 53.65 +1 1707504..1709024 - 506 119357308 - Cpha266_1506 - hypothetical protein 1452 56.51 +1 1709292..1710473 - 393 119357309 - Cpha266_1507 - RND family efflux transporter MFP subunit 1453 52.75 0 1710475..1712838 - 787 119357310 - Cpha266_1508 - hypothetical protein 1454 52.48 0 1712846..1713592 - 248 119357311 - Cpha266_1509 - ABC transporter related 1455 53.49 +1 1713892..1715379 - 495 119357312 - Cpha266_1510 - amino acid permease-associated region 1456 53.24 +1 1715532..1719188 - 1218 119357313 - Cpha266_1511 - FAD linked oxidase domain-containing protein 1457 53.37 +1 1719617..1720774 - 385 119357314 - Cpha266_1512 - DegT/DnrJ/EryC1/StrS aminotransferase 1458 50.49 0 1720791..1721921 - 376 119357315 - Cpha266_1513 - iron-containing alcohol dehydrogenase 1459 47.72 0 1721945..1722646 - 233 119357316 - Cpha266_1514 - acylneuraminate cytidylyltransferase 1460 46.71 0 1722677..1723633 - 318 119357317 - Cpha266_1515 - hypothetical protein 1461 49.15 0 1723636..1724697 - 353 119357318 - Cpha266_1516 - hypothetical protein 1462 40.76 -1 1724920..1725660 - 246 119357319 - Cpha266_1517 - hypothetical protein 1463 44.44 0 1725647..1726501 - 284 119357320 - Cpha266_1518 - DNA methylase N-4/N-6 domain-containing protein 1464 46.43 0 1727075..1728907 + 610 119357321 - Cpha266_1519 - AMP-dependent synthetase and ligase 1465 50.72 0 1729391..1730287 - 298 119357322 - Cpha266_1520 - HhH-GPD family protein 1466 45.45 0 1730469..1730831 - 120 119357323 rplS Cpha266_1521 - 50S ribosomal protein L19 1467 49.43 0 1730861..1731562 - 233 119357324 trmD Cpha266_1522 - tRNA (guanine-N(1)-)-methyltransferase 1468 46.23 0 1731604..1732107 - 167 119357325 - Cpha266_1523 - 16S rRNA processing protein RimM 1469 48.28 0 1732129..1732536 - 135 119357326 rpsP Cpha266_1524 - 30S ribosomal protein S16 1470 47.78 0 1732576..1733925 - 449 119357327 - Cpha266_1525 - signal recognition particle subunit FFH/SRP54 (srp54) 1471 46.95 0 1734105..1735088 + 327 119357328 - Cpha266_1526 - rfaE bifunctional protein 1472 44.91 0 1735060..1735698 - 212 119357329 - Cpha266_1527 - hypothetical protein 1473 44.75 0 1735748..1736404 - 218 119357330 - Cpha266_1528 - cyclase/dehydrase 1474 47.16 0 1736450..1738105 - 551 119357331 - Cpha266_1529 - C-terminal processing peptidase-3 1475 47.20 0 1738963..1739445 - 160 119357332 - Cpha266_1530 - endoribonuclease L-PSP 1476 48.04 0 1739791..1740429 + 212 119357333 - Cpha266_1531 - thiamine monophosphate synthase 1477 49.11 0 1740426..1741046 + 206 119357334 - Cpha266_1532 - thiamine-phosphate pyrophosphorylase 1478 47.92 0 1741050..1741865 + 271 119357335 - Cpha266_1533 - phosphomethylpyrimidine kinase 1479 44.92 0 1741870..1743207 - 445 119357336 - Cpha266_1534 - UDP-glucose 6-dehydrogenase 1480 43.82 -1 1743492..1744340 - 282 119357337 - Cpha266_1535 - hypothetical protein 1481 44.96 0 1744322..1745026 - 234 119357338 - Cpha266_1536 - hypothetical protein 1482 47.55 0 1745114..1746625 - 503 119357339 - Cpha266_1537 - leucyl aminopeptidase 1483 45.63 0 1746650..1747714 - 354 119357340 - Cpha266_1538 - phosphoesterase domain-containing protein 1484 43.96 -1 1748156..1749247 + 363 119357341 - Cpha266_1539 - radical SAM protein 1485 43.67 -1 1749264..1750037 + 257 119357342 - Cpha266_1540 - hypothetical protein 1486 46.73 0 1750051..1750707 + 218 119357343 - Cpha266_1541 - adenylate kinase 1487 46.12 0 1750776..1753208 + 810 119357344 - Cpha266_1542 - primosomal protein N' 1488 46.71 0 1753302..1753802 + 166 119357345 - Cpha266_1543 - DoxX family protein 1489 45.71 0 1753829..1754329 - 166 119357346 - Cpha266_1544 - 3-dehydroquinate dehydratase 1490 47.04 0 1754357..1755844 - 495 119357347 hslU Cpha266_1545 - ATP-dependent protease ATP-binding subunit 1491 47.46 0 1755899..1756450 - 183 119357348 - Cpha266_1546 - ATP-dependent protease peptidase subunit 1492 44.12 0 1756464..1757918 - 484 119357349 - Cpha266_1547 - RNA polymerase, sigma 54 subunit, RpoN 1493 43.98 -1 1757918..1758490 - 190 119357350 - Cpha266_1548 - hypothetical protein 1494 46.52 0 1758925..1761396 - 823 119357351 - Cpha266_1549 - PAS/PAC sensor hybrid histidine kinase 1495 37.97 -2 1761878..1762351 + 157 119357352 - Cpha266_1550 - hypothetical protein 1496 43.78 -1 1762393..1762593 + 66 119357353 - Cpha266_1551 - hypothetical protein 1497 52.54 0 1762610..1762963 + 117 119357354 - Cpha266_1552 - hypothetical protein 1498 47.16 0 1762987..1765662 + 891 119357355 - Cpha266_1553 - hypothetical protein 1499 47.74 0 1765665..1766129 - 154 119357356 - Cpha266_1554 - hypothetical protein 1500 50.19 0 1766142..1766948 - 268 119357357 - Cpha266_1555 - hypothetical protein 1501 51.25 0 1767096..1767932 - 278 119357358 - Cpha266_1556 - IstB ATP binding domain-containing protein 1502 50.83 0 1767938..1769509 - 523 119357359 - Cpha266_1557 - integrase catalytic subunit 1503 48.06 0 1769621..1770367 - 248 119357360 - Cpha266_1558 - hypothetical protein 1504 47.05 0 1770572..1771096 + 174 119357361 - Cpha266_1559 - hypothetical protein 1505 49.09 0 1771346..1772284 + 312 119357362 - Cpha266_1560 - hypothetical protein 1506 52.41 0 1772304..1773671 - 455 119357363 - Cpha266_1561 - hypothetical protein 1507 50.17 0 1773678..1775114 - 478 119357364 - Cpha266_1562 - RND efflux system outer membrane lipoprotein 1508 48.34 0 1775155..1778340 - 1061 119357365 - Cpha266_1563 - hydrophobe/amphiphile efflux-1 (HAE1) family protein 1509 48.38 0 1778450..1779559 - 369 119357366 - Cpha266_1564 - RND family efflux transporter MFP subunit 1510 48.41 0 1779677..1780180 - 167 119357367 - Cpha266_1565 - methylated-DNA--protein-cysteine methyltransferase 1511 48.21 0 1780578..1782587 - 669 119357368 - Cpha266_1566 - TPR repeat-containing protein 1512 52.22 0 1782996..1784075 - 359 119357369 - Cpha266_1567 - NADH:flavin oxidoreductase/NADH oxidase 1513 44.84 0 1784391..1784642 + 83 119357370 - Cpha266_1568 - hypothetical protein 1514 47.47 0 1784778..1785647 + 289 119357371 - Cpha266_1569 - UbiA prenyltransferase 1515 51.57 0 1786143..1787732 + 529 119357372 - Cpha266_1570 - glutamate synthase (NADPH) GltB2 subunit 1516 48.50 0 1787793..1788293 + 166 119357373 - Cpha266_1571 - rubrerythrin 1517 52.04 0 1788522..1788938 + 138 119357374 - Cpha266_1572 - hypothetical protein 1518 52.17 0 1789424..1790182 + 252 119357375 - Cpha266_1573 - peptidase M50 1519 55.35 +1 1790476..1791270 + 264 119357376 - Cpha266_1574 - sterol desaturase, putative 1520 59.14 +2 1791275..1791739 - 154 119357377 - Cpha266_1575 - rhodanese domain-containing protein 1521 50.76 0 1791726..1792385 - 219 119357378 - Cpha266_1576 - DNA polymerase III, epsilon subunit 1522 49.78 0 1792935..1793858 - 307 119357379 - Cpha266_1577 - hypothetical protein 1523 55.10 +1 1794072..1795022 - 316 119357380 - Cpha266_1578 - hypothetical protein 1524 45.95 0 1795400..1795843 - 147 119357381 - Cpha266_1579 - hypothetical protein 1525 56.28 +1 1796058..1796933 - 291 119357382 - Cpha266_1580 - heat shock protein HtpX 1526 49.43 0 1797345..1797518 - 57 119357383 - Cpha266_1581 - hypothetical protein 1527 48.90 0 1797922..1798467 + 181 119357384 - Cpha266_1582 - hypothetical protein 48.61 MEAN 4.51 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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