version 1.0
Chlorobium chlorochromatii CaD3, complete genome - 1..2572079 2002 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 779 43.57 0 1112596..1113660 + 354 78188763 - Cag_0792 - basic membrane protein A 780 42.57 0 1113714..1114709 + 331 78188764 - Cag_0793 - 3-beta hydroxysteroid dehydrogenase/isomerase family protein 781 42.21 0 1114825..1115466 + 213 78188765 - Cag_0794 - hypothetical protein 782 44.87 0 1115474..1116331 - 285 78188766 - Cag_0795 - prolipoprotein diacylglyceryl transferase 783 42.69 0 1116440..1117636 + 398 78188767 - Cag_0796 - citrate lyase, subunit 1 784 43.97 0 1117684..1119516 + 610 78188768 - Cag_0797 - citrate lyase, subunit 2 785 47.85 0 1119712..1120875 - 387 78188769 - Cag_0798 - aspartate aminotransferase 786 49.25 0 1120924..1124568 - 1214 78188770 - Cag_0799 - oxidoreductase, FAD-binding 787 47.38 0 1124699..1125538 - 279 78188771 - Cag_0800 - hypothetical protein 788 45.45 0 1125677..1126039 - 120 78188772 rplS Cag_0801 - 50S ribosomal protein L19 789 44.40 0 1126066..1126761 - 231 78188773 trmD Cag_0802 - tRNA (guanine-N(1)-)-methyltransferase 790 38.89 0 1126793..1127296 - 167 78188774 - Cag_0803 - 16S rRNA processing protein RimM 791 45.26 0 1127329..1127739 - 136 78188775 rpsP Cag_0804 - 30S ribosomal protein S16 792 42.63 0 1127792..1129147 - 451 78188776 - Cag_0805 - Signal recognition particle protein 793 46.18 0 1129256..1130290 + 344 78188777 - Cag_0806 - bifunctional ADP-heptose synthase 794 34.70 -1 1130395..1131855 + 486 78188778 - Cag_0807 - DNA-methyltransferase, type I restriction-modification enzyme subunit M 795 35.26 -1 1131852..1132943 + 363 78188779 - Cag_0808 - specificity determinant HsdS-like 796 29.00 -2 1133897..1134358 + 153 78188780 - Cag_0809 - transposase 797 35.42 -1 1134416..1136809 + 797 78188781 - Cag_0810 - DEAD/DEAH box helicase-like 798 46.73 0 1136940..1137581 - 213 78188782 - Cag_0811 - hypothetical protein 799 42.53 0 1137735..1138397 - 220 78188783 - Cag_0812 - hypothetical protein 800 45.83 0 1138419..1140074 - 551 78188784 - Cag_0813 - peptidase S41A, C-terminal protease 801 46.20 0 1140990..1141502 - 170 78188785 - Cag_0814 - hypothetical protein 802 50.37 +1 1141931..1142605 + 224 78188786 - Cag_0815 - thiamine-phosphate pyrophosphorylase, putative 803 51.83 +1 1142602..1143255 + 217 78188787 - Cag_0816 - thiamine monophosphate synthase 804 49.40 0 1143252..1144079 + 275 78188788 - Cag_0817 - phosphomethylpyrimidine kinase 805 36.39 -1 1144432..1144824 - 130 78188789 - Cag_0818 - hypothetical protein 806 31.67 -2 1144817..1145056 - 79 78188790 - Cag_0819 - hypothetical protein 807 39.30 0 1145221..1146225 - 334 78188791 - Cag_0820 - hypothetical protein 808 47.61 0 1146374..1147711 - 445 78188792 - Cag_0821 - UDP-glucose/GDP-mannose dehydrogenase family protein 809 45.66 0 1147844..1148695 - 283 78188793 - Cag_0822 - hypothetical protein 810 46.94 0 1148836..1150422 - 528 78188794 - Cag_0823 - aminopeptidase 811 46.29 0 1150406..1151470 - 354 78188795 - Cag_0824 - DHH family protein 812 48.86 0 1151584..1152684 + 366 78188796 - Cag_0825 - hypothetical protein 813 44.49 0 1152719..1153525 + 268 78188797 - Cag_0826 - hypothetical protein 814 45.66 0 1153534..1154190 + 218 78188798 - Cag_0827 - adenylate kinase 815 50.25 +1 1154285..1156732 + 815 78188799 - Cag_0828 - primosomal protein n 816 41.21 0 1156774..1157103 - 109 78188800 - Cag_0829 - transcriptional modulator of MazE/toxin, MazF 817 42.72 0 1157100..1157312 - 70 78188801 - Cag_0830 - hypothetical protein 818 44.76 0 1157520..1158569 + 349 78188802 - Cag_0831 - AsnC family regulatory protein 819 40.29 0 1158648..1159883 + 411 78188803 - Cag_0832 - transposase 820 40.00 0 1160095..1160334 - 79 78188804 - Cag_0833 - hypothetical protein 821 46.02 0 1160364..1161167 - 267 78188805 - Cag_0834 - hypothetical protein 822 50.00 +1 1161151..1161564 - 137 78188806 - Cag_0835 - hypothetical protein 823 52.38 +1 1162001..1162441 - 146 78188807 - Cag_0836 - hypothetical protein 824 49.00 0 1162740..1163639 + 299 78188808 - Cag_0837 - alpha/beta fold family hydrolase 825 51.77 +1 1163934..1165376 + 480 78188809 - Cag_0838 - hypothetical protein 826 47.20 0 1165383..1166024 + 213 78188810 - Cag_0839 - hypothetical protein 827 33.75 -1 1166236..1170351 - 1371 78188811 - Cag_0840 - TPR repeat-containing protein 828 49.56 +1 1170943..1171170 + 75 78188812 - Cag_0841 - hypothetical protein 829 51.15 +1 1171771..1175148 + 1125 78188813 - Cag_0843 - hypothetical protein 830 51.93 +1 1175145..1176338 + 397 78188814 - Cag_0844 - hypothetical protein 831 43.94 0 1176737..1177132 + 131 78188815 - Cag_0845 - XRE family transcriptional regulator 832 47.65 0 1177160..1177690 - 176 78188816 - Cag_0846 - cobalamin biosynthesis protein CobP 833 49.89 +1 1177760..1179976 - 738 78188817 - Cag_0847 - helicase RecD/TraA 834 40.45 0 1179976..1180284 - 102 78188818 - Cag_0848 - histone-like DNA-binding protein 835 43.53 0 1180454..1181149 - 231 78188819 - Cag_0849 - ATPase 836 44.44 0 1181142..1181870 - 242 78188820 - Cag_0850 - ATPase 837 43.81 0 1181867..1182868 - 333 78188821 - Cag_0851 - branched-chain amino acid ABC transporter, permease protein 838 45.98 0 1182869..1183738 - 289 78188822 - Cag_0852 - branched-chain amino acid ABC transporter, permease protein 839 45.11 0 1183878..1185023 - 381 78188823 - Cag_0853 - branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative 840 37.39 -1 1185124..1185345 - 73 78188824 - Cag_0854 - hypothetical protein 841 46.45 0 1185433..1185615 + 60 78188825 - Cag_0855 - hypothetical protein 842 39.50 0 1186090..1188861 - 923 78188826 - Cag_0856 - hypothetical protein 843 36.36 -1 1189209..1189373 - 54 78188827 - Cag_0857 - hypothetical protein 844 37.00 -1 1189360..1189632 - 90 78188828 - Cag_0858 - hypothetical protein 845 46.90 0 1189816..1191768 - 650 78188829 - Cag_0859 - oxaloacetate decarboxylase, alpha subunit 846 47.60 0 1192034..1193554 - 506 78188830 - Cag_0860 - Fe-S type hydro-lyase tartrate/fumarate alpha and beta region 847 48.78 0 1193843..1195441 + 532 78188831 - Cag_0861 - hypothetical protein 848 41.26 0 1195530..1196462 - 310 78188832 - Cag_0862 - malate dehydrogenase 849 44.96 0 1196731..1196988 - 85 78188833 rpmA Cag_0863 - 50S ribosomal protein L27 850 42.96 0 1197031..1197321 - 96 78188834 rplU Cag_0864 - 50S ribosomal protein L21 851 41.77 0 1197469..1197930 - 153 78188835 - Cag_0865 - hypothetical protein 852 46.21 0 1197989..1198252 - 87 78188836 - Cag_0866 - hypothetical protein 853 44.44 0 1198249..1198545 - 98 78188837 - Cag_0867 - hypothetical protein 854 53.06 +1 1198650..1200185 - 511 78188838 - Cag_0868 - RND efflux system, outer membrane lipoprotein, NodT 855 50.55 +1 1200223..1200954 - 243 78188839 - Cag_0869 - ATPase 856 48.71 0 1200958..1202160 - 400 78188840 - Cag_0870 - ABC transporter, permease protein 857 56.18 +2 1202157..1203377 - 406 78188841 - Cag_0871 - secretion protein HlyD 858 34.50 -1 1203569..1204939 + 456 78188842 - Cag_0872 - hypothetical protein 859 39.03 0 1204936..1206639 + 567 78188843 - Cag_0873 - TPR repeat-containing protein 860 42.44 0 1206683..1207846 + 387 78188844 - Cag_0874 - hypothetical protein 861 47.14 0 1207864..1208580 + 238 78188845 - Cag_0875 - glutamine amidotransferase, class I 862 55.36 +2 1208588..1209967 + 459 78188846 - Cag_0876 - DNA photolyase, class 2 863 27.10 -2 1210075..1210812 - 245 78188847 - Cag_0877 - hypothetical protein 864 29.73 -2 1210809..1211891 - 360 78188848 - Cag_0878 - hypothetical protein 865 43.02 0 1211927..1212979 - 350 78188849 pfkA Cag_0879 - 6-phosphofructokinase 866 28.70 -2 1213263..1213715 - 150 78188850 - Cag_0880 - hypothetical protein 867 34.64 -1 1213776..1213928 - 50 78188851 - Cag_0881 - hypothetical protein 868 45.09 0 1213988..1215442 - 484 78188852 - Cag_0882 - sulfide-quinone reductase, putative 869 38.73 -1 1215679..1215882 - 67 78188853 - Cag_0883 - hypothetical protein 870 49.56 +1 1215951..1216628 - 225 78188854 - Cag_0884 - hypothetical protein 871 48.06 0 1216712..1217356 - 214 78188855 - Cag_0885 - methyltransferase, putative 872 50.75 +1 1217353..1217886 - 177 78188856 - Cag_0886 - hypothetical protein 873 43.86 0 1217902..1218300 - 132 78188857 - Cag_0887 - hypothetical protein 874 50.54 +1 1218452..1219660 - 402 78188858 - Cag_0888 - alcohol dehydrogenase, iron-containing 875 46.96 0 1219728..1221041 - 437 78188859 - Cag_0889 - transporter, putative 876 49.42 0 1221177..1221692 + 171 78188860 - Cag_0890 - methylated-DNA-(protein)-cysteine S-methyltransferase 877 45.69 0 1221741..1222622 - 293 78188861 - Cag_0891 - metacaspase 878 43.45 0 1222701..1224104 - 467 78188862 - Cag_0892 - internalin-related protein 44.16 MEAN 5.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.