version 1.0
Chlorobium chlorochromatii CaD3, complete genome - 1..2572079 2002 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 21 47.92 0 21262..22461 + 399 78188005 - Cag_0021 - hypothetical protein 22 41.94 0 22529..23458 - 309 78188006 - Cag_0022 - patatin family protein 23 47.82 0 23776..24714 + 312 78188007 - Cag_0023 - peptide chain release factor 2 24 49.82 +1 24724..25554 + 276 78188008 - Cag_0024 - hypothetical protein 25 43.59 0 25717..26184 - 155 78188009 mscL Cag_0025 - large-conductance mechanosensitive channel 26 47.63 0 26628..28544 + 638 78188010 secD Cag_0026 - preprotein translocase subunit SecD 27 46.84 0 28632..29564 + 310 78188011 secF Cag_0027 - preprotein translocase subunit SecF 28 48.67 0 29679..30995 + 438 78188012 - Cag_0028 - peptidyl-prolyl cis-trans isomerase SurA 29 46.87 0 31358..33271 - 637 78188013 - Cag_0029 - DNA gyrase, B subunit 30 44.88 0 33852..34154 + 100 78188014 - Cag_0030 - ferredoxin, 2Fe-2S 31 32.79 -2 34161..34343 - 60 78188015 - Cag_0031 - hypothetical protein 32 36.92 -1 34369..34647 - 92 78188016 - Cag_0032 - hypothetical protein 33 35.46 -1 34929..36197 - 422 78188017 - Cag_0033 - hypothetical protein 34 47.19 0 36458..37150 - 230 78188018 - Cag_0034 - hypothetical protein 35 47.86 0 37150..38292 - 380 78188019 - Cag_0035 - geranylgeranyl reductase 36 49.32 0 38299..39768 - 489 78188020 - Cag_0036 - glycyl-tRNA synthetase 37 46.93 0 39973..40950 + 325 78188021 - Cag_0037 - hypothetical protein 38 43.49 0 41185..42159 + 324 78188022 - Cag_0038 - hypothetical protein 39 49.63 +1 42581..44194 - 537 78188023 - Cag_0039 - EmrB/QacA family drug resistance transporter 40 50.34 +1 44199..45227 - 342 78188024 - Cag_0040 - multidrug resistance protein A 41 54.44 +1 45345..46718 - 457 78188025 - Cag_0041 - outer membrane protein, putative 42 36.17 -1 47090..48994 - 634 78188026 - Cag_0042 - hypothetical protein 43 45.66 0 49023..49817 - 264 78188027 - Cag_0043 - hypothetical protein 44 48.91 0 49892..51085 - 397 78188028 pgk Cag_0044 - phosphoglycerate kinase 45 49.55 +1 51249..52259 - 336 78188029 - Cag_0045 - aminodeoxychorismate lyase 46 44.65 0 52277..52603 - 108 78188030 - Cag_0046 - chorismate mutase, putative 47 52.68 +1 52929..53915 + 328 78188031 - Cag_0047 - methyltransferase 48 40.26 0 53994..54224 + 76 78188032 - Cag_0048 - hypothetical protein 49 47.74 0 54326..56317 + 663 78188033 - Cag_0049 - penicillin-binding protein 3 50 51.97 +1 56323..57873 + 516 78188034 - Cag_0050 - UDP-N-acetylmuramyl-tripeptide synthetase 51 50.80 +1 58082..59512 + 476 78188035 - Cag_0051 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase 52 43.09 0 59660..60766 + 368 78188036 - Cag_0052 - phospho-N-acetylmuramoyl-pentapeptide transferase 53 50.04 +1 60769..62163 + 464 78188037 - Cag_0053 - UDP-N-acetylmuramoylalanine-D-glutamate ligase 54 44.03 0 62160..63374 + 404 78188038 - Cag_0054 - cell cycle protein FtsW 55 50.87 +1 63371..64459 + 362 78188039 - Cag_0055 - N-acetylglucosaminyltransferase, MurG 56 46.51 0 64680..66083 + 467 78188040 - Cag_0056 - UDP-N-acetylmuramate--alanine ligase 57 45.09 0 66233..67108 + 291 78188041 - Cag_0057 - FtsQ protein, putative 58 45.80 0 67141..68448 + 435 78188042 - Cag_0058 - cell division protein FtsA 59 46.42 0 68500..69783 + 427 78188043 - Cag_0059 - cell division protein FtsZ 60 47.18 0 69885..71177 + 430 78188044 - Cag_0060 - 4-hydroxybutyrate coenzyme A transferase 61 47.14 0 71235..72002 - 255 78188045 - Cag_0061 - hypothetical protein 62 38.19 -1 72153..72440 + 95 78188046 - Cag_0062 - hypothetical protein 63 35.17 -1 72485..72865 + 126 78188047 - Cag_0063 - hypothetical protein 64 42.20 0 72869..73906 + 345 78188048 - Cag_0064 - F0F1 ATP synthase subunit A 65 50.00 +1 74018..74245 + 75 78188049 - Cag_0065 - ATP synthase F0, C subunit 66 41.86 0 74350..74877 + 175 78188050 - Cag_0066 - ATP synthase F0, subunit B 67 40.37 0 74894..75433 + 179 78188051 - Cag_0067 - F0F1 ATP synthase subunit delta 68 44.55 0 75750..76685 + 311 78188052 - Cag_0068 - putative lipoprotein 69 47.05 0 76707..77282 + 191 78188053 - Cag_0069 - nicotinate-nucleotide adenylyltransferase 70 44.30 0 77346..79004 - 552 78188054 argS Cag_0070 - arginyl-tRNA synthetase 71 46.67 0 79067..79771 - 234 78188055 - Cag_0071 - Beta-phosphoglucomutase hydrolase 72 48.83 0 79762..80826 - 354 78188056 - Cag_0072 - tryptophanyl-tRNA synthetase 73 44.86 0 81266..82315 + 349 78188057 - Cag_0073 - deoxyhypusine synthase-like protein 74 42.00 0 82330..82998 + 222 78188058 - Cag_0074 - putative translaldolase 75 47.93 0 83182..85578 - 798 78188059 - Cag_0075 - DNA topoisomerase I 76 49.28 0 85769..87493 + 574 78188060 - Cag_0076 - cell wall hydrolase/autolysin 77 50.41 +1 87595..88578 + 327 78188061 - Cag_0077 - biotin--acetyl-CoA-carboxylase ligase 78 48.64 0 88598..89590 + 330 78188062 - Cag_0078 - Elongator protein 3/MiaB/NifB 79 51.56 +1 89590..90774 + 394 78188063 - Cag_0079 - 8-amino-7-oxononanoate synthase 80 50.00 +1 90774..91547 + 257 78188064 - Cag_0080 - hypothetical protein 81 47.33 0 91532..92317 + 261 78188065 - Cag_0081 - biotin biosynthesis protein BioC 82 46.49 0 92326..93009 + 227 78188066 bioD Cag_0082 - dithiobiotin synthetase 83 50.31 +1 93049..94332 + 427 78188067 - Cag_0083 - adenosylmethionine--8-amino-7-oxononanoate aminotransferase 84 41.21 0 94409..94738 - 109 78188068 - Cag_0084 - XRE family transcriptional regulator 85 39.94 0 94725..95057 - 110 78188069 - Cag_0085 - phage-like 86 40.29 0 95231..96466 + 411 78188070 - Cag_0086 - transposase 87 45.38 0 96733..97122 + 129 78188071 - Cag_0087 - Iojap-related protein 88 45.52 0 97415..99901 + 828 78188072 - Cag_0088 - DNA gyrase, subunit A 89 44.56 0 100407..102116 + 569 78188073 - Cag_0090 - CTP synthetase 90 39.22 0 107762..108169 + 135 78188074 - Cag_0091 - hypothetical protein 91 46.40 0 108181..108708 + 175 78188075 - Cag_0092 - hypothetical protein 92 45.24 0 108712..109719 + 335 78188076 - Cag_0093 - heptosyltransferase 93 42.36 0 109940..110338 + 132 78188077 rpsF Cag_0094 - 30S ribosomal protein S6 94 41.18 0 110399..110857 + 152 78188078 - Cag_0095 - single-strand binding protein 95 40.14 0 110910..111188 + 92 78188079 rpsR Cag_0096 - 30S ribosomal protein S18 96 43.64 0 111223..111678 + 151 78188080 rplI Cag_0097 - 50S ribosomal protein L9 97 43.92 0 111785..112417 - 210 78188081 - Cag_0098 - YgfB and YecA 98 42.22 0 112665..113891 + 408 78188082 - Cag_0099 - sulfide dehydrogenase, flavoprotein subunit, putative 99 49.16 0 114064..115485 + 473 78188083 trmE Cag_0100 - tRNA modification GTPase TrmE 100 44.39 0 115674..116975 - 433 78188084 - Cag_0101 - hypothetical protein 101 47.70 0 116979..117326 - 115 78188085 - Cag_0102 - XRE family transcriptional regulator 102 50.83 +1 117743..118165 - 140 78188086 - Cag_0103 - cytochrome c-555, membrane-bound 103 48.66 0 118404..119819 - 471 78188087 - Cag_0104 - Elongator protein 3/MiaB/NifB 104 51.28 +1 119823..120446 - 207 78188088 - Cag_0105 - hypothetical protein 105 48.42 0 120516..121655 - 379 78188089 - Cag_0106 - aminotransferase, class V 106 50.63 +1 121673..122776 - 367 78188090 - Cag_0107 - carbamoyl phosphate synthase small subunit 107 44.26 0 122786..123142 - 118 78188091 - Cag_0108 - hypothetical protein 108 49.76 +1 123241..124293 - 350 78188092 - Cag_0109 - peptidase M22, glycoprotease 109 39.47 0 124318..124545 + 75 78188093 - Cag_0110 - hypothetical protein 110 48.55 0 124581..125579 + 332 78188094 - Cag_0111 - magnesium chelatase, subunit I, putative 111 46.88 0 125579..126508 + 309 78188095 - Cag_0112 - von Willebrand factor, type A 112 51.79 +1 126528..127475 + 315 78188096 - Cag_0113 - hypothetical protein 113 43.28 0 127503..129332 - 609 78188097 - Cag_0114 - Elongator protein 3/MiaB/NifB 114 42.08 0 129473..130489 - 338 78188098 - Cag_0115 - CrtF-related protein 115 41.13 0 130592..131977 - 461 78188099 - Cag_0116 - Elongator protein 3/MiaB/NifB 116 44.53 0 132031..133236 - 401 78188100 - Cag_0117 - anion-transporting ATPase 117 52.58 +1 133602..133814 + 70 78188101 - Cag_0118 - hypothetical protein 118 45.89 0 133896..134516 + 206 78188102 - Cag_0119 - hypothetical protein 119 44.87 0 135000..135632 + 210 78188103 - Cag_0120 - hypothetical protein 120 42.53 0 135930..136190 + 86 78188104 - Cag_0121 - hypothetical protein 44.16 MEAN 5.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.