version 1.0
Chlorobium chlorochromatii CaD3, complete genome - 1..2572079 2002 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 500 50.15 +1 588743..589741 + 332 78188484 - Cag_0506 - glycosyl transferase 501 25.42 -2 589877..591721 + 614 78188485 - Cag_0507 - hypothetical protein 502 38.30 -1 591743..594178 + 811 78188486 - Cag_0508 - Rab family protein 503 45.09 0 594556..595746 - 396 78188487 - Cag_0509 - hypothetical protein 504 49.67 +1 595913..596824 - 303 78188488 - Cag_0510 - hypothetical protein 505 49.28 0 596824..598278 - 484 78188489 - Cag_0511 - metal dependent phosphohydrolase 506 47.52 0 598397..599284 + 295 78188490 - Cag_0512 - glucose-1-phosphate thymidylyltransferase, long form 507 35.73 -1 599333..600208 + 291 78188491 - Cag_0513 - putative DNA-binding protein 508 46.63 0 600247..600840 + 197 78188492 - Cag_0514 - dTDP-4-dehydrorhamnose 3,5-epimerase related 509 46.80 0 600848..601723 + 291 78188493 - Cag_0515 - dTDP-4-dehydrorhamnose reductase 510 44.19 0 601736..602785 + 349 78188494 - Cag_0516 - dTDP-glucose 4,6-dehydratase 511 49.28 0 602924..603901 + 325 78188495 - Cag_0517 - UDP-glucose 4-epimerase 512 49.89 +1 604266..605678 + 470 78188496 - Cag_0518 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 513 48.27 0 605937..607121 + 394 78188497 - Cag_0519 - hypothetical protein 514 34.63 -1 607200..607508 + 102 78188498 - Cag_0520 - hypothetical protein 515 39.30 0 607498..607782 + 94 78188499 - Cag_0521 - hypothetical protein 516 42.93 0 608061..608258 + 65 78188500 - Cag_0522 - hypothetical protein 517 46.99 0 608416..611667 + 1083 78188501 ileS Cag_0523 - isoleucyl-tRNA synthetase 518 42.24 0 611730..612167 + 145 78188502 - Cag_0524 - TraR/DksA family transcriptional regulator 519 44.91 0 612287..613780 - 497 78188503 - Cag_0525 - amidophosphoribosyl transferase 520 45.14 0 614113..614637 + 174 78188504 - Cag_0526 - hypothetical protein 521 47.18 0 614996..615883 + 295 78188505 - Cag_0527 - cell division protein, putative 522 47.23 0 616283..617131 - 282 78188506 - Cag_0528 - endonuclease IV 523 47.28 0 617409..631502 - 4697 78188507 - Cag_0529 - hypothetical protein 524 50.37 +1 632445..633530 - 361 78188508 - Cag_0530 - hydrogenase formation HypD protein 525 47.57 0 633534..633821 - 95 78188509 - Cag_0531 - hydrogenase expression/formation protein (HUPF/HYPC) 526 33.33 -2 634330..635193 - 287 78188510 - Cag_0532 - hypothetical protein 527 49.47 0 635481..637730 - 749 78188511 - Cag_0533 - hydrogenase maturation protein HypF 528 47.10 0 637748..638575 - 275 78188512 - Cag_0534 - hydrogenase accessory protein HypB 529 31.42 -2 638618..640135 - 505 78188513 - Cag_0535 - hypothetical protein 530 41.97 0 640287..640703 - 138 78188514 - Cag_0536 - hydrogenase expression/synthesis, HypA 531 47.96 0 640802..642244 - 480 78188515 - Cag_0537 - putative oxidoreductase 532 44.17 0 642270..643118 - 282 162319774 - Cag_0538 - ferredoxin--NADP(+) reductase subunit alpha 533 45.05 0 643445..644050 + 201 78188517 hisH Cag_0539 - imidazole glycerol phosphate synthase subunit HisH 534 45.09 0 644368..645141 + 257 78188518 - Cag_0540 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 535 49.33 0 645430..646104 + 224 78188519 - Cag_0541 - putative transcriptional regulator 536 48.15 0 646079..646834 + 251 78188520 - Cag_0542 - pseudouridine synthase, Rsu 537 49.88 +1 646895..648955 + 686 78188521 - Cag_0543 - hypothetical protein 538 40.74 0 649042..649608 - 188 78188522 - Cag_0544 - hypothetical protein 539 36.71 -1 649867..650103 + 78 78188523 - Cag_0545 - hypothetical protein 540 38.98 0 650202..650768 - 188 78188524 - Cag_0546 - hypothetical protein 541 46.65 0 651268..652536 - 422 78188525 - Cag_0547 - collagenase 542 48.61 0 652586..654568 - 660 78188526 - Cag_0548 - DNA primase 543 51.48 +1 654730..655473 + 247 78188527 - Cag_0549 - MotA/TolQ/ExbB proton channel family protein 544 52.25 +1 655473..656006 + 177 78188528 - Cag_0550 - hypothetical protein 545 51.30 +1 656008..656547 + 179 78188529 - Cag_0551 - hypothetical protein 546 47.92 0 656544..657311 + 255 78188530 - Cag_0552 - TonB-like 547 43.38 0 657379..658035 - 218 78188531 - Cag_0553 - hypothetical protein 548 36.52 -1 658051..658584 - 177 78188532 - Cag_0554 - hypothetical protein 549 36.20 -1 658585..658968 - 127 78188533 - Cag_0555 - hypothetical protein 550 51.01 +1 659396..660430 + 344 78188534 - Cag_0556 - hydrogenase expression/formation protein HypE 551 47.60 0 660522..661502 + 326 78188535 - Cag_0557 - cobalamin biosynthesis protein CbiM, putative 552 48.48 0 661582..662664 - 360 78188536 - Cag_0558 - secretion protein HlyD 553 43.48 0 662873..663286 + 137 78188537 - Cag_0559 - phosphoribosyl-AMP cyclohydrolase 554 43.36 0 663270..664007 + 245 78188538 - Cag_0560 - ubiquinone/menaquinone biosynthesis methyltransferase 555 44.84 0 664471..664722 + 83 78188539 - Cag_0561 - hypothetical protein 556 44.34 0 665033..666031 - 332 78188540 - Cag_0562 - putative PAS/PAC sensor protein 557 45.79 0 666254..669361 - 1035 78188541 - Cag_0563 - putative PAS/PAC sensor protein 558 40.78 0 669531..669839 + 102 78188542 - Cag_0564 - histone-like DNA-binding protein 559 46.13 0 669928..670521 - 197 78188543 - Cag_0565 - adenine phosphoribosyltransferase 560 47.91 0 670534..671946 - 470 78188544 - Cag_0566 - hypothetical protein 561 41.03 0 672255..672683 + 142 78188545 - Cag_0567 - hypothetical protein 562 40.13 0 672736..674001 - 421 78188546 - Cag_0568 - rod shape-determining protein RodA 563 45.53 0 674186..675103 + 305 78188547 era Cag_0569 - GTP-binding protein Era 564 42.27 0 675279..677057 - 592 78188548 rpsA Cag_0570 - 30S ribosomal protein S1 565 49.74 +1 677141..677719 - 192 78188549 - Cag_0571 - cytidylate kinase 566 45.05 0 678292..679383 + 363 78188550 - Cag_0572 - translation-associated GTPase 567 49.88 +1 679418..680221 + 267 78188551 - Cag_0573 - glutamate racemase 568 35.45 -1 680480..680668 + 62 78188552 - Cag_0574 - hypothetical protein 569 34.29 -1 680653..680967 + 104 78188553 - Cag_0575 - hypothetical protein 570 37.39 -1 681076..681297 + 73 78188554 - Cag_0576 - hypothetical protein 571 36.00 -1 681346..682284 + 312 78188555 - Cag_0577 - hypothetical protein 572 42.38 0 682281..683330 + 349 78188556 - Cag_0578 - hypothetical protein 573 46.10 0 683327..684313 + 328 78188557 ispH Cag_0579 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 574 52.19 +1 684372..686333 + 653 78188558 - Cag_0580 - putative NADPH-dependent glutamate synthase small subunit 575 46.89 0 686358..686630 + 90 78188559 - Cag_0581 - hypothetical protein 576 41.23 0 687080..687484 + 134 78188560 - Cag_0582 - hypothetical protein 577 39.66 0 687628..687864 + 78 78188561 - Cag_0583 - hypothetical protein 578 41.30 0 688130..688405 + 91 78188562 - Cag_0584 - hypothetical protein 579 36.88 -1 688405..688686 + 93 78188563 - Cag_0585 - hypothetical protein 580 46.91 0 688745..689311 + 188 78188564 - Cag_0586 - hypothetical protein 581 38.53 -1 689476..690072 - 198 78188565 - Cag_0587 - hypothetical protein 582 36.93 -1 690066..691259 - 397 78188566 - Cag_0588 - hypothetical protein 583 47.98 0 691317..692852 - 511 78188567 guaA Cag_0589 - bifunctional GMP synthase/glutamine amidotransferase protein 584 47.88 0 692934..695222 - 762 78188568 - Cag_0590 - penicillin-binding protein 1A 585 44.75 0 695270..696145 - 291 78188569 - Cag_0591 - proline iminopeptidase, putative 586 40.61 0 696372..697031 + 219 78188570 - Cag_0592 - DedA family protein 587 31.39 -2 697153..697563 + 136 78188571 - Cag_0593 - nucleotidyltransferase substrate-binding protein 588 30.42 -2 697560..697868 + 102 78188572 - Cag_0594 - hypothetical protein 589 44.88 0 697937..698707 - 256 78188573 - Cag_0595 - hypothetical protein 590 49.04 0 698937..699458 - 173 78188574 - Cag_0596 - acetyltransferase 591 40.29 0 699769..701004 + 411 78188575 - Cag_0597 - transposase 592 30.94 -2 701288..702289 - 333 78188576 - Cag_0598 - hypothetical protein 593 31.41 -2 702757..703590 - 277 78188577 - Cag_0599 - hypothetical protein 594 35.37 -1 703887..704180 - 97 78188578 - Cag_0600 - hypothetical protein 595 36.82 -1 704592..704849 - 85 78188579 - Cag_0601 - hypothetical protein 596 47.80 0 704964..705965 - 333 78188580 - Cag_0602 - fructose-1,6-bisphosphatase 597 49.15 0 706047..707753 + 568 78188581 - Cag_0603 - RecJ exonuclease 598 39.75 0 707865..708752 - 295 78188582 - Cag_0604 - hypothetical protein 599 40.73 0 708736..709668 - 310 78188583 - Cag_0605 - glycosyl transferase 44.16 MEAN 5.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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