version 1.0
Chlorobium chlorochromatii CaD3, complete genome - 1..2572079 2002 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 448 50.36 +1 533159..534562 - 467 78188432 - Cag_0454 - phosphoglucomutase/phosphomannomutase family protein 449 39.22 0 534879..535082 + 67 78188433 - Cag_0455 - hypothetical protein 450 43.97 0 535338..535619 + 93 78188434 rpsT Cag_0456 - 30S ribosomal protein S20 451 47.48 0 535712..536326 + 204 78188435 - Cag_0457 - DNA recombination protein, RuvA 452 48.72 0 536332..537618 + 428 78188436 - Cag_0458 - folylpolyglutamate synthetase 453 45.19 0 537944..539233 + 429 78188437 rho Cag_0459 - transcription termination factor Rho 454 50.40 +1 539838..540581 + 247 78188438 - Cag_0460 - electron transfer flavoprotein beta-subunit (beta-ETF) 455 49.19 0 540693..541682 + 329 78188439 - Cag_0461 - electron transfer flavoprotein alpha-subunit 456 44.83 0 541825..542433 + 202 78188440 - Cag_0462 - hypothetical protein 457 44.78 0 542549..545125 - 858 78188441 - Cag_0463 - surface antigen family protein 458 46.27 0 545212..546069 - 285 78188442 - Cag_0464 - di-trans-poly-cis-decaprenylcistransferase 459 48.21 0 546260..547684 + 474 78188443 - Cag_0465 - glutamyl-tRNA(Gln) amidotransferase A subunit 460 47.78 0 547735..548634 + 299 78188444 - Cag_0466 - succinyl-CoA ligase, alpha subunit 461 49.95 +1 548723..549709 - 328 78188445 - Cag_0467 - KpsF/GutQ 462 39.04 0 549819..550151 + 110 78188446 - Cag_0468 - hypothetical protein 463 49.02 0 550167..551702 + 511 78188447 - Cag_0469 - polysaccharide biosynthesis protein 464 46.20 0 551719..552231 - 170 78188448 - Cag_0470 - hypothetical protein 465 47.35 0 552329..552799 - 156 78188449 - Cag_0471 - hypothetical protein 466 45.28 0 552867..553226 - 119 78188450 - Cag_0472 - hypothetical protein 467 45.10 0 553311..553871 - 186 78188451 - Cag_0473 - sigma-24 (FecI-like) 468 43.31 0 554056..555438 - 460 78188452 - Cag_0474 - phosphoglucomutase/phosphomannomutase family protein 469 46.89 0 555642..556784 + 380 78188453 - Cag_0475 - glycosyl transferase family protein 470 42.13 0 556816..557190 + 124 78188454 - Cag_0476 - hypothetical protein 471 50.00 +1 557120..558277 - 385 78188455 - Cag_0477 - D-alanyl-D-alanine carboxypeptidease, putative 472 43.69 0 558290..559168 - 292 78188456 - Cag_0478 - VpsC protein 473 43.95 0 559192..559926 - 244 78188457 - Cag_0479 - ATPase 474 46.92 0 559930..560724 - 264 78188458 - Cag_0480 - putative ABC transport system permease protein 475 42.97 0 560773..561633 - 286 78188459 - Cag_0481 - phosphoesterase PHP-like 476 47.94 0 561719..562567 - 282 78188460 - Cag_0482 - bacitracin resistance protein BacA 477 50.00 +1 562564..563259 - 231 78188461 - Cag_0483 - Ham1-like protein 478 49.58 +1 563334..564041 - 235 78188462 - Cag_0484 - pyridoxal phosphate biosynthetic protein PdxJ 479 45.81 0 564249..565466 + 405 78188463 - Cag_0485 - hypothetical protein 480 42.82 0 565456..568353 + 965 78188464 - Cag_0486 - TPR repeat-containing protein 481 51.22 +1 568475..569419 - 314 78188465 - Cag_0487 - methionyl-tRNA formyltransferase 482 46.50 0 569511..570110 - 199 78188466 - Cag_0488 - formylmethionine deformylase 483 47.86 0 570869..572362 + 497 78188467 - Cag_0489 - IMP dehydrogenase 484 45.16 0 572581..574398 + 605 78188468 - Cag_0490 - GTP-binding protein LepA 485 45.12 0 574568..575407 + 279 78188469 - Cag_0491 - peptidase S26A, signal peptidase I 486 46.92 0 575556..575945 - 129 78188470 - Cag_0492 - hypothetical protein 487 46.10 0 576139..577626 + 495 78188471 - Cag_0493 - anthranilate synthase component I 488 47.60 0 577652..579172 + 506 78188472 - Cag_0494 - peptidase S1C, Do 489 42.03 0 579482..579964 + 160 78188473 - Cag_0495 - GreA/GreB family elongation factor 490 40.89 0 579979..580203 + 74 78188474 - Cag_0496 - hypothetical protein 491 47.69 0 580210..580968 + 252 78188475 - Cag_0497 - triosephosphate isomerase 492 40.26 0 581090..581854 - 254 78188476 - Cag_0498 - phosphate ABC transporter permease 493 44.92 0 581888..583078 - 396 78188477 - Cag_0499 - phosphate ABC transporter permease 494 44.82 0 583071..584315 - 414 78188478 - Cag_0500 - phosphate ABC transporter permease 495 42.57 0 584389..585417 - 342 78188479 - Cag_0501 - periplasmic phosphate binding protein 496 46.91 0 585692..585934 - 80 78188480 - Cag_0502 - hypothetical protein 497 46.62 0 585934..587130 - 398 78188481 - Cag_0503 - acetylornithine aminotransferase 498 50.08 +1 587382..587984 + 200 78188482 - Cag_0504 - phosphoribosylglycinamide formyltransferase 499 47.43 0 587981..588661 + 226 78188483 - Cag_0505 - radical activating enzyme, putative 500 50.15 +1 588743..589741 + 332 78188484 - Cag_0506 - glycosyl transferase 501 25.42 -2 589877..591721 + 614 78188485 - Cag_0507 - hypothetical protein 502 38.30 -1 591743..594178 + 811 78188486 - Cag_0508 - Rab family protein 503 45.09 0 594556..595746 - 396 78188487 - Cag_0509 - hypothetical protein 504 49.67 +1 595913..596824 - 303 78188488 - Cag_0510 - hypothetical protein 505 49.28 0 596824..598278 - 484 78188489 - Cag_0511 - metal dependent phosphohydrolase 506 47.52 0 598397..599284 + 295 78188490 - Cag_0512 - glucose-1-phosphate thymidylyltransferase, long form 507 35.73 -1 599333..600208 + 291 78188491 - Cag_0513 - putative DNA-binding protein 508 46.63 0 600247..600840 + 197 78188492 - Cag_0514 - dTDP-4-dehydrorhamnose 3,5-epimerase related 509 46.80 0 600848..601723 + 291 78188493 - Cag_0515 - dTDP-4-dehydrorhamnose reductase 510 44.19 0 601736..602785 + 349 78188494 - Cag_0516 - dTDP-glucose 4,6-dehydratase 511 49.28 0 602924..603901 + 325 78188495 - Cag_0517 - UDP-glucose 4-epimerase 512 49.89 +1 604266..605678 + 470 78188496 - Cag_0518 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 513 48.27 0 605937..607121 + 394 78188497 - Cag_0519 - hypothetical protein 514 34.63 -1 607200..607508 + 102 78188498 - Cag_0520 - hypothetical protein 515 39.30 0 607498..607782 + 94 78188499 - Cag_0521 - hypothetical protein 516 42.93 0 608061..608258 + 65 78188500 - Cag_0522 - hypothetical protein 517 46.99 0 608416..611667 + 1083 78188501 ileS Cag_0523 - isoleucyl-tRNA synthetase 518 42.24 0 611730..612167 + 145 78188502 - Cag_0524 - TraR/DksA family transcriptional regulator 519 44.91 0 612287..613780 - 497 78188503 - Cag_0525 - amidophosphoribosyl transferase 520 45.14 0 614113..614637 + 174 78188504 - Cag_0526 - hypothetical protein 521 47.18 0 614996..615883 + 295 78188505 - Cag_0527 - cell division protein, putative 522 47.23 0 616283..617131 - 282 78188506 - Cag_0528 - endonuclease IV 523 47.28 0 617409..631502 - 4697 78188507 - Cag_0529 - hypothetical protein 524 50.37 +1 632445..633530 - 361 78188508 - Cag_0530 - hydrogenase formation HypD protein 525 47.57 0 633534..633821 - 95 78188509 - Cag_0531 - hydrogenase expression/formation protein (HUPF/HYPC) 526 33.33 -2 634330..635193 - 287 78188510 - Cag_0532 - hypothetical protein 527 49.47 0 635481..637730 - 749 78188511 - Cag_0533 - hydrogenase maturation protein HypF 528 47.10 0 637748..638575 - 275 78188512 - Cag_0534 - hydrogenase accessory protein HypB 529 31.42 -2 638618..640135 - 505 78188513 - Cag_0535 - hypothetical protein 530 41.97 0 640287..640703 - 138 78188514 - Cag_0536 - hydrogenase expression/synthesis, HypA 531 47.96 0 640802..642244 - 480 78188515 - Cag_0537 - putative oxidoreductase 532 44.17 0 642270..643118 - 282 162319774 - Cag_0538 - ferredoxin--NADP(+) reductase subunit alpha 533 45.05 0 643445..644050 + 201 78188517 hisH Cag_0539 - imidazole glycerol phosphate synthase subunit HisH 534 45.09 0 644368..645141 + 257 78188518 - Cag_0540 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 535 49.33 0 645430..646104 + 224 78188519 - Cag_0541 - putative transcriptional regulator 536 48.15 0 646079..646834 + 251 78188520 - Cag_0542 - pseudouridine synthase, Rsu 537 49.88 +1 646895..648955 + 686 78188521 - Cag_0543 - hypothetical protein 538 40.74 0 649042..649608 - 188 78188522 - Cag_0544 - hypothetical protein 539 36.71 -1 649867..650103 + 78 78188523 - Cag_0545 - hypothetical protein 540 38.98 0 650202..650768 - 188 78188524 - Cag_0546 - hypothetical protein 541 46.65 0 651268..652536 - 422 78188525 - Cag_0547 - collagenase 542 48.61 0 652586..654568 - 660 78188526 - Cag_0548 - DNA primase 543 51.48 +1 654730..655473 + 247 78188527 - Cag_0549 - MotA/TolQ/ExbB proton channel family protein 544 52.25 +1 655473..656006 + 177 78188528 - Cag_0550 - hypothetical protein 545 51.30 +1 656008..656547 + 179 78188529 - Cag_0551 - hypothetical protein 546 47.92 0 656544..657311 + 255 78188530 - Cag_0552 - TonB-like 547 43.38 0 657379..658035 - 218 78188531 - Cag_0553 - hypothetical protein 44.16 MEAN 5.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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