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Chlorobium chlorochromatii CaD3, complete genome - 1..2572079 2002 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 319 40.18 0 362432..364141 + 569 78188303 - Cag_0325 - hypothetical protein 320 42.25 0 364260..364820 - 186 78188304 - Cag_0326 - ribosome recycling factor 321 42.72 0 364870..365082 - 70 78188305 rpmE Cag_0327 - 50S ribosomal protein L31 322 48.99 0 365337..367457 + 706 78188306 - Cag_0328 - ATP-dependent DNA helicase RecG 323 49.06 0 367528..368487 + 319 78188307 - Cag_0329 - GTPase EngC 324 49.71 +1 368830..370203 + 457 78188308 - Cag_0330 - aldehyde dehydrogenase family protein 325 41.98 0 370233..370637 + 134 78188309 - Cag_0331 - hypothetical protein 326 32.39 -2 370767..372359 + 530 78188310 - Cag_0332 - type II DNA modification methyltransferase M.TdeIII 327 35.50 -1 372668..373450 + 260 78188311 - Cag_0333 - type II restriction endonuclease TdeIII 328 45.61 0 373499..375469 - 656 78188312 - Cag_0334 - ATPase 329 50.95 +1 375680..376990 + 436 78188313 - Cag_0335 - FusA/NodT family protein 330 48.41 0 376974..377948 + 324 78188314 - Cag_0336 - secretion protein HlyD 331 49.59 +1 377945..379918 + 657 78188315 - Cag_0337 - ATPase 332 44.42 0 379999..381171 - 390 78188316 - Cag_0338 - succinyl-CoA synthetase, beta subunit 333 42.86 0 381437..382633 - 398 78188317 - Cag_0339 - endoglucanase Y-like 334 35.52 -1 382630..384141 - 503 78188318 - Cag_0340 - cell wall biosynthesis glycosyltransferase-like protein 335 39.75 0 384212..386470 - 752 78188319 - Cag_0341 - TPR repeat-containing protein 336 39.98 0 386816..387628 - 270 78188320 - Cag_0342 - diaminopimelate epimerase 337 42.94 0 388095..390290 + 731 78188321 - Cag_0343 - photosystem P840 reaction center, large subunit 338 49.50 +1 390381..391085 + 234 78188322 - Cag_0344 - photosystem P840 reaction center iron-sulfur protein 339 45.19 0 391238..392038 + 266 78188323 - Cag_0345 - dolichol-phosphate mannosyltransferase 340 44.46 0 392155..394230 - 691 78188324 - Cag_0346 - elongation factor G 341 45.43 0 394573..395886 + 437 78188325 - Cag_0347 - enolase 342 43.93 0 395978..396298 + 106 78188326 - Cag_0348 - hypothetical protein 343 44.85 0 396365..398431 + 688 78188327 - Cag_0349 - IspG protein 344 48.85 0 398428..399207 + 259 78188328 - Cag_0350 - short chain dehydrogenase/reductase family oxidoreductase 345 41.15 0 399687..399878 + 63 78188329 secE Cag_0351 - preprotein translocase subunit SecE 346 42.19 0 399902..400477 + 191 78188330 - Cag_0352 - NusG antitermination factor 347 42.25 0 400525..400950 + 141 78188331 rplK Cag_0353 - 50S ribosomal protein L11 348 42.46 0 401018..401707 + 229 78188332 rplA Cag_0354 - 50S ribosomal protein L1 349 41.43 0 401726..402244 + 172 78188333 rplJ Cag_0355 - 50S ribosomal protein L10 350 42.93 0 402312..402686 + 124 78188334 rplL Cag_0356 - 50S ribosomal protein L7/L12 351 44.15 0 403046..406948 + 1300 78188335 rpoB Cag_0357 - DNA-directed RNA polymerase subunit beta 352 44.75 0 407046..411554 + 1502 78188336 - Cag_0358 - DNA-directed RNA polymerase subunit beta' 353 47.40 0 411656..412999 - 447 78188337 - Cag_0359 - Acetyl-CoA carboxylase, biotin carboxylase 354 45.36 0 413017..413490 - 157 78188338 - Cag_0360 - Acetyl-CoA biotin carboxyl carrier 355 41.62 0 413551..414117 - 188 78188339 - Cag_0361 - elongation factor P 356 42.75 0 414466..414741 + 91 78188340 - Cag_0362 - histone-like DNA-binding protein 357 45.77 0 414830..415834 + 334 78188341 - Cag_0363 - Acetyl-CoA carboxylase, alpha subunit 358 42.04 0 416121..419003 + 960 78188342 - Cag_0364 - signal transduction protein 359 45.00 0 419388..420416 - 342 78188343 - Cag_0365 - 2-oxoglutarate ferredoxin oxidoreductase subunit beta 360 47.69 0 420420..422306 - 628 78188344 - Cag_0366 - 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit 361 41.30 0 422821..423096 - 91 78188345 - Cag_0367 - hypothetical protein 362 41.78 0 423147..424010 - 287 78188346 - Cag_0368 - hypothetical protein 363 48.55 0 424216..426876 + 886 78188347 alaS Cag_0369 - alanyl-tRNA synthetase 364 41.59 0 426976..427302 + 108 78188348 - Cag_0370 - ferredoxin, 4Fe-4S, putative 365 40.58 0 427343..428611 + 422 78188349 - Cag_0371 - putative ABC transporter, integral membrane protein 366 47.47 0 428716..429387 - 223 78188350 folE Cag_0372 - GTP cyclohydrolase I 367 43.18 0 429347..429793 - 148 78188351 - Cag_0373 - 6-pyruvoyltetrahydropterin synthase 368 46.46 0 429803..430282 - 159 78188352 - Cag_0374 - hypothetical protein 369 49.05 0 430440..432335 + 631 78188353 - Cag_0375 - ATPase 370 31.10 -2 432649..433185 - 178 78188354 - Cag_0376 - hypothetical protein 371 28.12 -2 433195..433866 - 223 78188355 - Cag_0377 - hypothetical protein 372 35.29 -1 434114..435541 - 475 78188356 - Cag_0378 - helicase domain-containing protein 373 34.78 -1 435543..436577 - 344 78188357 - Cag_0379 - hypothetical protein 374 39.32 0 436570..440475 - 1301 78188358 - Cag_0380 - DEAD/DEAH box helicase-like 375 35.14 -1 440734..441009 - 91 78188359 - Cag_0381 - XRE family transcriptional regulator 376 50.94 +1 441231..442826 - 531 78188360 - Cag_0382 - thiamine biosynthesis protein ThiC 377 53.75 +1 443051..443971 + 306 78188361 - Cag_0383 - short chain dehydrogenase/reductase family oxidoreductase 378 46.69 0 444104..444979 + 291 78188362 - Cag_0384 - hypothetical protein 379 48.41 0 445043..445513 + 156 78188363 - Cag_0385 - hypothetical protein 380 46.59 0 445775..447976 - 733 78188364 - Cag_0386 - haem catalase/peroxidase 381 47.11 0 448296..449195 - 299 78188365 - Cag_0387 - RNA polymerase sigma factor rpoD (sigma-A) 382 49.10 0 449392..452100 - 902 78188366 valS Cag_0388 - valyl-tRNA synthetase 383 46.17 0 452131..452808 - 225 78188367 - Cag_0389 - peptidase S14, ClpP 384 46.04 0 453033..453701 + 222 78188368 thyX Cag_0390 - FAD-dependent thymidylate synthase 385 48.52 0 453655..455643 - 662 78188369 - Cag_0391 - peptidase M41, FtsH 386 45.13 0 456112..457620 + 502 78188370 - Cag_0392 - glutamyl-tRNA synthetase 387 46.17 0 457978..459099 + 373 78188371 - Cag_0393 - hydroxyneurosporene synthase CrtC 388 44.69 0 459410..459955 + 181 78188372 - Cag_0394 - cytochrome b6-f complex, iron-sulfur subunit 389 45.67 0 459991..461271 + 426 78188373 - Cag_0395 - cytochrome b-c complex, cytochrome b subunit 390 51.20 +1 461634..462176 + 180 78188374 - Cag_0396 - hypothetical protein 391 47.79 0 462279..462707 - 142 78188375 - Cag_0397 - protein tyrosine phosphatase 392 47.54 0 462881..463915 - 344 78188376 - Cag_0398 - hypothetical protein 393 47.14 0 463906..464202 - 98 78188377 - Cag_0399 - redox-active disulfide protein 2 394 49.10 0 464414..465523 - 369 78188378 - Cag_0400 - chlorophyllide reductase iron protein subunit X 395 46.05 0 465941..466939 - 332 78188379 - Cag_0401 - 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide 396 41.56 0 467024..467497 - 157 78188380 - Cag_0402 - 2-vinyl bacteriochlorophyllide hydratase 397 42.02 0 468043..469044 + 333 78188381 - Cag_0403 - hypothetical protein 398 49.62 +1 469051..470739 - 562 78188382 - Cag_0404 - peptide ABC transporter, periplasmic peptide-binding protein, putative 399 42.25 0 471075..472274 - 399 78188383 - Cag_0405 - hypothetical protein 400 47.60 0 472535..479083 - 2182 78188384 - Cag_0406 - alkaline phosphatase 401 48.47 0 479264..479752 + 162 78188385 - Cag_0407 - protein tyrosine phosphatase 402 40.90 0 479958..480935 - 325 78188386 - Cag_0408 - sodium/bile acid symporter family protein 403 47.00 0 481339..482655 + 438 78188387 - Cag_0409 - phosphoserine phosphatase SerB 404 50.78 +1 482856..483302 + 148 78188388 - Cag_0410 - hypothetical protein 405 48.23 0 483373..484419 + 348 78188389 - Cag_0411 - AraC family transcriptional regulator 406 51.12 +1 484595..485443 + 282 78188390 - Cag_0412 - putative molybdenum utilization protein ModD 407 39.07 0 485464..486213 + 249 78188391 - Cag_0413 - molybdenum ABC transporter periplasmic-binding protein 408 42.07 0 486215..486901 + 228 78188392 - Cag_0414 - molybdate ABC transporter permease 409 39.02 0 486898..487953 + 351 78188393 - Cag_0415 - molybdate ABC transporter ATP-binding protein 410 48.01 0 487980..488606 - 208 78188394 - Cag_0416 - endonuclease III/Nth 411 38.43 -1 488614..489123 - 169 78188395 - Cag_0417 - NusB antitermination factor 412 49.35 0 489147..489839 - 230 78188396 - Cag_0418 - HAD superfamily hydrolase 413 50.27 +1 489846..493418 - 1190 78188397 - Cag_0419 - chromosome segregation protein SMC 414 51.71 +1 493489..494364 - 291 78188398 - Cag_0420 - dihydropteroate synthase 415 44.99 0 494541..494969 - 142 78188399 - Cag_0421 - 6-pyruvoyl tetrahydrobiopterin synthase, putative 416 49.97 +1 495126..496898 - 590 78188400 - Cag_0422 - Para-aminobenzoate synthase, component I 417 46.99 0 497006..498565 - 519 78188401 - Cag_0423 - exopolyphosphatase, putative 418 50.74 +1 498781..500004 - 407 78188402 - Cag_0424 - drug:proton antiporter 44.16 MEAN 5.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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