version 1.0
Chlorobium chlorochromatii CaD3, complete genome - 1..2572079 2002 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1903 49.82 +1 2465683..2467623 - 646 78189887 sdhA Cag_1934 - succinate dehydrogenase flavoprotein subunit 1904 46.25 0 2467670..2468335 - 221 78189888 - Cag_1935 - succinate dehydrogenase, cytochrome b558 subunit 1905 49.69 +1 2468468..2469115 - 215 78189889 - Cag_1936 - hypothetical protein 1906 45.15 0 2469119..2469736 - 205 78189890 - Cag_1937 - hypothetical protein 1907 42.02 0 2469736..2471013 - 425 78189891 - Cag_1938 - Sel1 repeat-containing protein 1908 48.34 0 2471042..2471794 - 250 78189892 - Cag_1939 - lysophospholipase L2, putative 1909 47.76 0 2472234..2472725 + 163 78189893 - Cag_1940 - rare lipoprotein A 1910 49.70 +1 2472805..2473806 - 333 78189894 - Cag_1941 - Elongator protein 3/MiaB/NifB 1911 49.00 0 2473799..2474794 - 331 78189895 - Cag_1942 - uroporphyrin-III C-methyltransferase-like 1912 41.13 0 2474811..2475272 - 153 78189896 - Cag_1943 - siroheme synthase-like 1913 47.25 0 2475380..2476399 - 339 78189897 - Cag_1944 - polysulfide reductase, subunit C, putative 1914 47.64 0 2476408..2477169 - 253 78189898 - Cag_1945 - polysulfide reductase, subunit B, putative 1915 44.09 0 2477172..2477552 - 126 78189899 - Cag_1946 - hypothetical protein 1916 44.67 0 2477545..2479194 - 549 78189900 - Cag_1947 - DsrK protein 1917 42.14 0 2479197..2480195 - 332 78189901 - Cag_1948 - DsrM protein 1918 44.53 0 2480192..2480602 - 136 78189902 - Cag_1949 - hypothetical protein 1919 42.18 0 2480679..2480972 - 97 78189903 - Cag_1950 - DsrH protein 1920 40.32 0 2481004..2481375 - 123 78189904 - Cag_1951 - DsrF protein 1921 43.06 0 2481383..2481742 - 119 78189905 - Cag_1952 - DsrE protein 1922 45.18 0 2481863..2482225 - 120 78189906 - Cag_1953 - hypothetical protein 1923 46.61 0 2482256..2483995 - 579 78189907 - Cag_1954 - putative glutamate synthase (NADPH) small subunit 1924 45.60 0 2484018..2485109 - 363 78189908 - Cag_1955 - sulfite reductase, dissimilatory-type beta subunit 1925 44.47 0 2485192..2486448 - 418 78189909 - Cag_1956 - sulfite reductase, dissimilatory-type alpha subunit 1926 39.88 0 2486502..2486837 - 111 78189910 - Cag_1957 - sulfite reductase, dissimilatory-type, gamma subunit 1927 48.06 0 2487099..2488517 - 472 78189911 - Cag_1958 - cobyrinic acid a,c-diamide synthase CbiA 1928 41.35 0 2488607..2488918 - 103 78189912 - Cag_1959 - redox protein regulator of disulfide bond formation-like 1929 49.15 0 2488902..2489369 - 155 78189913 - Cag_1960 - rhodanese-like protein 1930 42.16 0 2489384..2489893 - 169 78189914 - Cag_1961 - hypothetical protein 1931 42.51 0 2489984..2490397 - 137 78189915 - Cag_1962 - hypothetical protein 1932 46.19 0 2490416..2491333 - 305 78189916 - Cag_1963 - hypothetical protein 1933 49.70 +1 2491503..2494361 - 952 78189917 - Cag_1964 - molybdenum enzyme related to thiosulfate reductase and polysulfide reductase, large subunit 1934 47.62 0 2494383..2495936 - 517 78189918 - Cag_1965 - Fe-S-cluster-containing hydrogenase components 1-like 1935 42.53 0 2496300..2496995 - 231 78189919 - Cag_1966 - hypothetical protein 1936 40.95 0 2497036..2499570 - 844 78189920 - Cag_1967 - hypothetical protein 1937 48.53 0 2500292..2501587 - 431 78189921 - Cag_1968 - glutamate-1-semialdehyde-2,1-aminomutase 1938 48.47 0 2501729..2502580 - 283 78189922 - Cag_1969 - recombination protein O, RecO 1939 46.34 0 2502662..2502907 + 81 78189923 - Cag_1970 - hypothetical protein 1940 44.30 0 2502999..2503910 - 303 78189924 - Cag_1971 - hypothetical protein 1941 49.33 0 2503979..2505103 - 374 78189925 - Cag_1972 - glycosy hydrolase family protein 1942 48.86 0 2505100..2506419 - 439 78189926 - Cag_1973 - ATPase 1943 50.24 +1 2506774..2507607 + 277 78189927 - Cag_1974 - 2-dehydro-3-deoxyphosphooctonate aldolase 1944 48.97 0 2507580..2508212 + 210 78189928 - Cag_1975 - putative 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 1945 39.89 0 2508240..2508590 + 116 78189929 - Cag_1976 - hypothetical protein 1946 46.89 0 2508625..2509428 + 267 78189930 mazG Cag_1977 - nucleoside triphosphate pyrophosphohydrolase 1947 45.71 0 2509542..2510042 - 166 78189931 - Cag_1978 - rubrerythrin 1948 44.04 0 2510128..2510622 - 164 78189932 - Cag_1979 - bacterioferritin 1949 45.50 0 2510734..2511399 - 221 78189933 - Cag_1980 - peroxiredoxin 1950 40.29 0 2513293..2514528 - 411 78189934 - Cag_1981 - transposase 1951 42.77 0 2514742..2515239 - 165 78189935 - Cag_1982 - ferric uptake regulator family protein 1952 47.41 0 2515296..2518592 - 1098 78189936 - Cag_1983 - alpha amylase domain-containing protein 1953 47.47 0 2519000..2521015 - 671 78189937 - Cag_1984 - alpha amylase domain-containing protein 1954 39.87 0 2521259..2522191 - 310 78189938 - Cag_1985 - cold shock protein 1955 53.36 +1 2522309..2522992 - 227 78189939 - Cag_1986 - protease, putative 1956 49.32 0 2522992..2523429 - 145 78189940 - Cag_1987 - hypothetical protein 1957 48.41 0 2523442..2524794 - 450 78189941 - Cag_1988 - hypothetical protein 1958 46.92 0 2525145..2526851 + 568 78189942 - Cag_1989 - ribonuclease E and G 1959 50.23 +1 2526881..2527744 + 287 78189943 dapD Cag_1990 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 1960 49.91 +1 2527749..2529497 + 582 78189944 - Cag_1991 - peptidase S41A, C-terminal protease 1961 45.13 0 2529619..2530008 - 129 78189945 - Cag_1992 - hypothetical protein 1962 47.99 0 2530005..2530625 - 206 78189946 - Cag_1993 - ribonuclease HII 1963 42.92 0 2530731..2530949 + 72 78189947 - Cag_1994 - hypothetical protein 1964 35.33 -1 2530940..2531239 + 99 78189948 - Cag_1995 - hypothetical protein 1965 48.19 0 2531281..2532027 - 248 78189949 - Cag_1996 - putative segregation and condensation protein A 1966 48.46 0 2532303..2533049 + 248 78189950 - Cag_1997 - TPR repeat-containing protein 1967 42.98 0 2533170..2533511 - 113 78189951 - Cag_1998 - nitrogen regulatory protein P-II (GlnB, GlnK) 1968 48.24 0 2533520..2534854 - 444 78189952 - Cag_1999 - ammonium transporter 1969 50.26 +1 2535074..2537176 - 700 78189953 - Cag_2000 - Fis family transcriptional regulator 1970 46.79 0 2537276..2538286 - 336 78189954 - Cag_2001 - hypothetical protein 1971 45.62 0 2538602..2539081 + 159 78189955 - Cag_2002 - ferric uptake regulator family protein 1972 41.45 0 2539273..2540406 + 377 78189956 - Cag_2003 - fic family protein 1973 44.91 0 2540686..2541981 - 431 78189957 - Cag_2004 - sulfide dehydrogenase, flavoprotein subunit 1974 47.14 0 2542003..2542386 - 127 78189958 - Cag_2005 - sulfide dehydrogenase, cytochrome subunit 1975 45.71 0 2542881..2544746 + 621 78189959 - Cag_2006 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 1976 42.16 0 2544884..2547250 + 788 78189960 - Cag_2007 - DNA-directed DNA polymerase B 1977 40.28 0 2547439..2548662 + 407 78189961 - Cag_2008 - rubredoxin:oxygen oxidoreductase, putative 1978 42.86 0 2548801..2549094 - 97 78189962 - Cag_2009 - hypothetical protein 1979 46.90 0 2549248..2550537 - 429 78189963 - Cag_2010 - transporter, putative 1980 42.79 0 2550760..2550981 + 73 78189964 - Cag_2011 - hypothetical protein 1981 48.71 0 2551059..2552951 - 630 78189965 - Cag_2012 - phosphoenolpyruvate carboxykinase 1982 41.43 0 2553185..2553715 - 176 78189966 - Cag_2013 - thiol:disulfide interchange protein, thioredoxin family protein 1983 46.72 0 2554198..2555586 + 462 78189967 - Cag_2014 - F0F1 ATP synthase subunit beta 1984 47.19 0 2555601..2555867 + 88 78189968 - Cag_2015 - ATP synthase F1, epsilon subunit 1985 49.32 0 2556034..2556990 + 318 78189969 - Cag_2016 - muramoyltetrapeptide carboxypeptidase, putative 1986 46.78 0 2557003..2557359 + 118 78189970 - Cag_2017 - hypothetical protein 1987 47.23 0 2557535..2558419 + 294 78189971 - Cag_2018 - hypothetical protein 1988 49.09 0 2558847..2559785 - 312 78189972 - Cag_2019 - exopolyphosphatase, putative 1989 38.97 0 2559939..2560577 + 212 78189973 - Cag_2020 - hypothetical protein 1990 46.37 0 2560587..2561453 - 288 78189974 prmA Cag_2021 - ribosomal protein L11 methyltransferase 1991 46.70 0 2561520..2562140 - 206 78189975 - Cag_2022 - NLP/P60 family protein 1992 48.59 0 2562192..2563607 + 471 78189976 - Cag_2023 - aspartate kinase III 1993 46.99 0 2563625..2564620 + 331 78189977 - Cag_2024 - phosphoribosylaminoimidazole synthetase 1994 44.11 0 2564677..2565381 + 234 78189978 - Cag_2025 - hypothetical protein 1995 48.50 0 2565402..2566403 + 333 78189979 - Cag_2026 - glycerol-3-phosphate dehydrogenase, NAD-dependent 1996 49.09 0 2566414..2566908 - 164 78189980 - Cag_2027 - putative phosphohistidine phosphatase, SixA 1997 47.42 0 2566954..2568387 - 477 78189981 - Cag_2028 - 23S rRNA methyltransferase/RumA 1998 47.76 0 2568439..2569041 - 200 78189982 - Cag_2029 - phosphoesterase, PA-phosphatase related 1999 43.76 0 2569060..2570814 - 584 78189983 - Cag_2030 - Oxa1/60 kDa IMP family protein 2000 41.75 0 2570807..2571091 - 94 78189984 - Cag_2031 - hypothetical protein 2001 43.41 0 2571199..2571456 - 85 78189985 rnpA Cag_2032 - ribonuclease P 2002 42.95 0 2571689..2571844 - 51 78189986 rpmH Cag_2033 - 50S ribosomal protein L34 44.16 MEAN 5.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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