version 1.0
Chlorobium chlorochromatii CaD3, complete genome - 1..2572079 2002 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1786 47.20 0 2334897..2336519 - 540 78189770 - Cag_1814 - light-independent protochlorophyllide reductase subunit B 1787 45.87 0 2336594..2337877 - 427 78189771 - Cag_1815 - light-independent protochlorophyllide reductase subunit N 1788 44.83 0 2338086..2339390 - 434 78189772 - Cag_1816 - adenylosuccinate synthetase 1789 44.27 0 2339403..2339987 - 194 78189773 - Cag_1817 - GTPase EngB 1790 47.26 0 2340235..2341677 + 480 78189774 cysS Cag_1818 - cysteinyl-tRNA synthetase 1791 33.61 -1 2341756..2342112 - 118 78189775 - Cag_1819 - hypothetical protein 1792 38.32 -1 2342122..2342763 - 213 78189776 - Cag_1820 - hypothetical protein 1793 43.85 0 2342890..2344011 - 373 78189777 - Cag_1821 - mannose-1-phosphate guanylyltransferase, putative 1794 42.13 0 2344227..2344931 + 234 78189778 gidB Cag_1822 - glucose-inhibited division protein B 1795 40.22 0 2344992..2345456 - 154 78189779 rplQ Cag_1823 - 50S ribosomal protein L17 1796 39.94 0 2345498..2346481 - 327 78189780 - Cag_1824 - DNA-directed RNA polymerase subunit alpha 1797 42.65 0 2346512..2347123 - 203 78189781 rpsD Cag_1825 - 30S ribosomal protein S4 1798 43.49 0 2347158..2347541 - 127 78189782 - Cag_1826 - 30S ribosomal protein S11 1799 43.12 0 2347586..2347963 - 125 78189783 rpsM Cag_1827 - 30S ribosomal protein S13 1800 40.17 0 2347997..2348113 - 38 78189784 rpmJ Cag_1828 - 50S ribosomal protein L36 1801 36.99 -1 2348223..2348441 - 72 78189785 - Cag_1829 - translation initiation factor IF-1 1802 42.40 0 2348495..2349277 - 260 78189786 - Cag_1830 - peptidase M24A 1803 40.92 0 2349286..2350617 - 443 78189787 secY Cag_1831 - preprotein translocase subunit SecY 1804 41.98 0 2350647..2351201 - 184 78189788 rplO Cag_1832 - 50S ribosomal protein L15 1805 35.94 -1 2351236..2351427 - 63 78189789 rpmD Cag_1833 - 50S ribosomal protein L30 1806 40.08 0 2351443..2351961 - 172 78189790 rpsE Cag_1834 - 30S ribosomal protein S5 1807 41.11 0 2351986..2352345 - 119 78189791 rplR Cag_1835 - 50S ribosomal protein L18 1808 42.59 0 2352399..2352938 - 179 78189792 rplF Cag_1836 - 50S ribosomal protein L6 1809 36.62 -1 2352967..2353362 - 131 78189793 rpsH Cag_1837 - 30S ribosomal protein S8 1810 43.33 0 2353423..2353692 - 89 78189794 rpsN Cag_1838 - 30S ribosomal protein S14 1811 40.31 0 2353709..2354296 - 195 78189795 rplE Cag_1839 - 50S ribosomal protein L5 1812 39.09 0 2354358..2354600 - 80 162319769 rplX Cag_1840 - 50S ribosomal protein L24 1813 41.73 0 2354719..2355087 - 122 78189797 rplN Cag_1841 - 50S ribosomal protein L14 1814 40.74 0 2355127..2355396 - 89 78189798 rpsQ Cag_1842 - 30S ribosomal protein S17 1815 39.90 0 2355455..2355652 - 65 78189799 - Cag_1843 - 50S ribosomal protein L29 1816 43.57 0 2355683..2356102 - 139 78189800 rplP Cag_1844 - 50S ribosomal protein L16 1817 42.26 0 2356148..2356909 - 253 78189801 rpsC Cag_1845 - 30S ribosomal protein S3 1818 41.67 0 2356923..2357282 - 119 78189802 rplV Cag_1846 - 50S ribosomal protein L22 1819 40.40 0 2357313..2357609 - 98 78189803 rpsS Cag_1847 - 30S ribosomal protein S19 1820 43.57 0 2357643..2358482 - 279 78189804 rplB Cag_1848 - 50S ribosomal protein L2 1821 41.03 0 2358513..2358824 - 103 78189805 rplW Cag_1849 - 50S ribosomal protein L23 1822 40.35 0 2358855..2359481 - 208 78189806 rplD Cag_1850 - 50S ribosomal protein L4 1823 41.90 0 2359502..2360131 - 209 78189807 rplC Cag_1851 - 50S ribosomal protein L3 1824 41.35 0 2360158..2360469 - 103 78189808 rpsJ Cag_1852 - 30S ribosomal protein S10 1825 44.59 0 2360547..2361728 - 393 78189809 - Cag_1853 - elongation factor Tu 1826 42.08 0 2361788..2363902 - 704 78189810 - Cag_1854 - elongation factor G 1827 41.45 0 2363940..2364407 - 155 78189811 - Cag_1855 - 30S ribosomal protein S7 1828 47.10 0 2364439..2364852 - 137 78189812 rpsL Cag_1856 - 30S ribosomal protein S12 1829 46.35 0 2365057..2367453 - 798 78189813 - Cag_1857 - hypothetical protein 1830 35.64 -1 2367653..2367955 - 100 78189814 - Cag_1858 - XRE family transcriptional regulator 1831 38.06 -1 2368507..2369754 + 415 78189815 - Cag_1860 - hypothetical protein 1832 31.69 -2 2370018..2370260 + 80 78189816 - Cag_1861 - hypothetical protein 1833 49.30 0 2370424..2371914 - 496 78189817 - Cag_1862 - polysaccharide efflux transporter, putative 1834 49.16 0 2371911..2373047 - 378 78189818 - Cag_1863 - glycosyl transferase, group 1 family protein 1835 38.19 -1 2373200..2374228 - 342 78189819 - Cag_1864 - hypothetical protein 1836 48.33 0 2374247..2374846 - 199 78189820 - Cag_1865 - hypothetical protein 1837 38.89 0 2374880..2375887 - 335 78189821 - Cag_1866 - putative DNA-binding protein 1838 47.18 0 2375927..2376778 - 283 78189822 - Cag_1867 - glycosyl transferase 1839 51.68 +1 2376775..2377902 - 375 78189823 - Cag_1868 - glycosyl transferase 1840 45.69 0 2377905..2378171 - 88 78189824 - Cag_1869 - HPrNtr 1841 43.37 0 2378361..2378858 - 165 78189825 - Cag_1870 - acetyltransferase 1842 48.87 0 2378864..2379880 - 338 78189826 obgE Cag_1871 - GTPase ObgE 1843 43.78 0 2379971..2380219 + 82 78189827 - Cag_1872 - exodeoxyribonuclease, small subunit 1844 46.15 0 2380313..2381740 - 475 78189828 gatB Cag_1873 - aspartyl/glutamyl-tRNA amidotransferase subunit B 1845 40.92 0 2381866..2382432 - 188 78189829 - Cag_1874 - hypothetical protein 1846 48.81 0 2382485..2384926 - 813 78189830 - Cag_1875 - TPR repeat-containing protein 1847 47.63 0 2384981..2386330 - 449 78189831 - Cag_1876 - ATPase 1848 44.77 0 2386382..2386687 - 101 78189832 - Cag_1877 - hypothetical protein 1849 44.97 0 2386923..2388056 - 377 78189833 - Cag_1878 - alanine dehydrogenase 1850 42.74 0 2388232..2388720 - 162 78189834 - Cag_1879 - chlorosome envelope protein X 1851 43.71 0 2389015..2390238 + 407 78189835 - Cag_1880 - hypothetical protein 1852 37.50 -1 2390238..2390645 + 135 78189836 - Cag_1881 - hypothetical protein 1853 47.09 0 2390726..2394025 - 1099 78189837 - Cag_1882 - transcription-repair coupling factor 1854 49.49 +1 2394177..2395148 + 323 78189838 - Cag_1883 - oligopeptide/dipeptide ABC transporter, ATP-binding protein-like 1855 42.66 0 2395222..2395875 + 217 78189839 - Cag_1884 - hypothetical protein 1856 44.40 0 2395872..2397317 + 481 78189840 - Cag_1885 - putative transcriptional regulator 1857 49.90 +1 2397314..2398303 + 329 78189841 - Cag_1886 - von Willebrand factor, type A 1858 48.96 0 2398353..2399357 + 334 78189842 - Cag_1887 - von Willebrand factor, type A 1859 49.54 +1 2399583..2401100 - 505 78189843 - Cag_1888 - carotenoid isomerase, putative 1860 41.88 0 2401366..2402067 + 233 78189844 - Cag_1889 - RNA polymerase sigma factor RpoE 1861 43.88 0 2402102..2402338 + 78 78189845 - Cag_1890 - hypothetical protein 1862 43.85 0 2402646..2403035 + 129 78189846 - Cag_1891 - ArsR family transcriptional regulator 1863 40.35 0 2403273..2403671 + 132 78189847 - Cag_1892 - HSP20 family protein 1864 45.51 0 2403753..2405666 + 637 78189848 - Cag_1893 - heat shock protein Hsp70 1865 44.14 0 2405816..2406250 + 144 78189849 - Cag_1894 - photosystem P840 reaction center protein PscD 1866 46.52 0 2406533..2409610 + 1025 78189850 - Cag_1895 - hypothetical protein 1867 49.04 0 2409689..2411413 + 574 78189851 - Cag_1896 - hypothetical protein 1868 44.16 0 2411709..2416382 + 1557 78189852 - Cag_1897 - Nidogen, extracellular region 1869 45.47 0 2416439..2418037 - 532 78189853 - Cag_1898 - alpha-isopropylmalate/homocitrate synthase family transferase 1870 46.38 0 2418042..2418608 - 188 78189854 - Cag_1899 - 3-isopropylmalate dehydratase, small subunit 1871 47.22 0 2418637..2419932 - 431 78189855 - Cag_1900 - 3-isopropylmalate dehydratase 1872 45.80 0 2420036..2421094 - 352 78189856 - Cag_1901 - 3-isopropylmalate dehydrogenase 1873 46.22 0 2421110..2422102 - 330 78189857 - Cag_1902 - ketol-acid reductoisomerase 1874 41.04 0 2422189..2422668 - 159 78189858 - Cag_1903 - acetolactate synthase 3 regulatory subunit 1875 41.43 0 2422886..2423095 - 69 78189859 - Cag_1904 - hypothetical protein 1876 45.88 0 2423177..2424898 - 573 78189860 - Cag_1905 - acetolactate synthase large subunit biosynthetic type 1877 49.29 0 2425075..2426754 - 559 78189861 - Cag_1906 - dihydroxy-acid dehydratase 1878 49.62 +1 2427525..2428187 + 220 78189862 - Cag_1907 - ExbB/TolQ family protein 1879 45.77 0 2428200..2428625 + 141 78189863 - Cag_1908 - ExbD/TolR family protein 1880 51.53 +1 2428627..2429571 + 314 78189864 - Cag_1909 - hypothetical protein 1881 46.33 0 2429599..2430921 + 440 78189865 - Cag_1910 - TolB protein, putative 1882 50.00 +1 2430964..2431581 + 205 78189866 - Cag_1911 - OmpA domain-containing protein 1883 44.10 0 2431671..2432534 + 287 78189867 - Cag_1912 - TPR repeat-containing protein 1884 46.25 0 2432740..2432979 - 79 78189868 - Cag_1913 - hypothetical protein 1885 42.03 0 2434242..2435000 - 252 78189869 - Cag_1916 - hypothetical protein 44.16 MEAN 5.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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