version 1.0
Chlorobium chlorochromatii CaD3, complete genome - 1..2572079 2002 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1730 41.84 0 2275984..2276571 + 195 78189714 - Cag_1758 - photosystem P840 reaction center cytochrome c-551 1731 40.17 0 2276744..2277094 - 116 78189715 - Cag_1759 - 7-cyano-7-deazaguanine reductase 1732 45.51 0 2277322..2278011 + 229 78189716 - Cag_1760 - hypothetical protein 1733 49.21 0 2278008..2278895 + 295 78189717 - Cag_1761 - hypothetical protein 1734 44.74 0 2278902..2279918 + 338 78189718 - Cag_1762 - phage/XerD family site-specific recombinase 1735 39.25 0 2280006..2280326 + 106 78189719 - Cag_1763 - hypothetical protein 1736 43.61 0 2280441..2281442 + 333 78189720 - Cag_1764 - HPr kinase/phosphorylase 1737 47.68 0 2281429..2283219 + 596 78189721 - Cag_1765 - peptide ABC transporter, periplasmic peptide-binding protein 1738 47.10 0 2283235..2284200 + 321 78189722 - Cag_1766 - peptide ABC transporter, permease protein 1739 49.67 +1 2284284..2285342 + 352 78189723 ruvB Cag_1767 - Holliday junction DNA helicase B 1740 50.10 +1 2285395..2286873 + 492 78189724 - Cag_1768 - TPR repeat-containing protein 1741 28.87 -2 2286893..2287318 - 141 78189725 - Cag_1769 - hypothetical protein 1742 32.88 -2 2287305..2287526 - 73 78189726 - Cag_1770 - hypothetical protein 1743 42.33 0 2287575..2288330 - 251 78189727 - Cag_1771 - hypothetical protein 1744 31.13 -2 2288369..2290090 - 573 78189728 - Cag_1772 - hypothetical protein 1745 49.81 +1 2290172..2290942 - 256 78189729 - Cag_1773 - hypothetical protein 1746 46.53 0 2290942..2291547 - 201 78189730 - Cag_1774 - LemA family protein 1747 44.79 0 2291651..2293858 - 735 78189731 - Cag_1775 - metal dependent phosphohydrolase 1748 35.82 -1 2294482..2294682 + 66 78189732 - Cag_1776 - hypothetical protein 1749 32.87 -2 2294862..2295293 - 143 78189733 - Cag_1777 - PilT domain-containing protein 1750 49.15 0 2295628..2296803 - 391 78189734 - Cag_1778 - DNA polymerase III, delta subunit, putative 1751 47.04 0 2296926..2297837 - 303 78189735 - Cag_1779 - branched-chain amino acid aminotransferase 1752 45.36 0 2297911..2299116 - 401 78189736 - Cag_1780 - phosphofructokinase 1753 46.27 0 2299387..2300661 + 424 78189737 - Cag_1781 - lipoprotein releasing system 1754 47.47 0 2300836..2301309 - 157 78189738 - Cag_1782 - MECDP-synthase 1755 48.20 0 2301364..2302305 - 313 78189739 - Cag_1783 - dihydroorotate dehydrogenase 1 1756 45.28 0 2302392..2304509 - 705 78189740 - Cag_1784 - Alpha-glucan phosphorylase 1757 45.76 0 2304773..2305633 + 286 78189741 - Cag_1785 - hypothetical protein 1758 46.24 0 2305915..2306379 - 154 78189742 - Cag_1786 - hypothetical protein 1759 46.30 0 2306406..2308271 - 621 78189743 - Cag_1787 - carbamoyl-phosphate synthase, large subunit 1760 47.10 0 2308541..2309782 + 413 78189744 - Cag_1788 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 1761 48.75 0 2309834..2311150 + 438 78189745 - Cag_1789 - serine hydroxymethyltransferase 1762 48.88 0 2311272..2312963 - 563 78189746 - Cag_1790 - hypothetical protein 1763 50.56 +1 2312964..2313677 - 237 78189747 - Cag_1791 - hypothetical protein 1764 43.45 0 2313821..2314621 - 266 78189748 - Cag_1792 - hypothetical protein 1765 50.76 +1 2314664..2315449 + 261 78189749 - Cag_1793 - 6-phosphogluconolactonase 1766 45.61 0 2315524..2315751 - 75 78189750 - Cag_1794 - hypothetical protein 1767 40.63 0 2315792..2316106 - 104 78189751 - Cag_1795 - hypothetical protein 1768 46.34 0 2316188..2319331 + 1047 78189752 - Cag_1796 - ankyrin 1769 37.04 -1 2319411..2319842 - 143 78189753 - Cag_1797 - hypothetical protein 1770 40.44 0 2319848..2320255 - 135 78189754 - Cag_1798 - XRE family transcriptional regulator 1771 41.20 0 2320259..2320741 - 160 78189755 - Cag_1799 - hypothetical protein 1772 46.58 0 2320903..2322540 - 545 78189756 - Cag_1800 - electron transfer flavoprotein-ubiquinone oxidoreductase 1773 46.93 0 2322562..2323944 - 460 78189757 - Cag_1801 - divalent cation transporter 1774 49.18 0 2324131..2324742 - 203 78189758 - Cag_1802 - methylpurine-DNA glycosylase (MPG) 1775 45.36 0 2324899..2325696 + 265 78189759 - Cag_1803 - ParaA family ATPase 1776 48.14 0 2325721..2326632 + 303 78189760 - Cag_1804 - ParB-like partition protein 1777 50.40 +1 2326763..2327512 + 249 78189761 - Cag_1805 - dihydrodipicolinate reductase 1778 46.67 0 2327595..2328719 - 374 78189762 - Cag_1806 - putative oxygen-independent coproporphyrinogen III oxidase 1779 45.44 0 2328750..2329352 - 200 78189763 - Cag_1807 - histidinol-phosphate phosphatase 1780 43.54 0 2329365..2330834 - 489 78189764 - Cag_1808 - glycogen/starch synthase, ADP-glucose type 1781 48.72 0 2330964..2332094 + 376 78189765 - Cag_1809 - hypothetical protein 1782 43.46 0 2332111..2332683 + 190 78189766 - Cag_1810 - bacteriochlorophyll 4-vinyl reductase 1783 39.14 0 2332987..2333313 - 108 78189767 - Cag_1811 - XRE family transcriptional regulator 1784 35.26 -1 2333303..2333614 - 103 78189768 - Cag_1812 - hypothetical protein 1785 45.97 0 2333875..2334705 - 276 78189769 chlL Cag_1813 - protochlorophyllide reductase iron-sulfur ATP-binding protein 1786 47.20 0 2334897..2336519 - 540 78189770 - Cag_1814 - light-independent protochlorophyllide reductase subunit B 1787 45.87 0 2336594..2337877 - 427 78189771 - Cag_1815 - light-independent protochlorophyllide reductase subunit N 1788 44.83 0 2338086..2339390 - 434 78189772 - Cag_1816 - adenylosuccinate synthetase 1789 44.27 0 2339403..2339987 - 194 78189773 - Cag_1817 - GTPase EngB 1790 47.26 0 2340235..2341677 + 480 78189774 cysS Cag_1818 - cysteinyl-tRNA synthetase 1791 33.61 -1 2341756..2342112 - 118 78189775 - Cag_1819 - hypothetical protein 1792 38.32 -1 2342122..2342763 - 213 78189776 - Cag_1820 - hypothetical protein 1793 43.85 0 2342890..2344011 - 373 78189777 - Cag_1821 - mannose-1-phosphate guanylyltransferase, putative 1794 42.13 0 2344227..2344931 + 234 78189778 gidB Cag_1822 - glucose-inhibited division protein B 1795 40.22 0 2344992..2345456 - 154 78189779 rplQ Cag_1823 - 50S ribosomal protein L17 1796 39.94 0 2345498..2346481 - 327 78189780 - Cag_1824 - DNA-directed RNA polymerase subunit alpha 1797 42.65 0 2346512..2347123 - 203 78189781 rpsD Cag_1825 - 30S ribosomal protein S4 1798 43.49 0 2347158..2347541 - 127 78189782 - Cag_1826 - 30S ribosomal protein S11 1799 43.12 0 2347586..2347963 - 125 78189783 rpsM Cag_1827 - 30S ribosomal protein S13 1800 40.17 0 2347997..2348113 - 38 78189784 rpmJ Cag_1828 - 50S ribosomal protein L36 1801 36.99 -1 2348223..2348441 - 72 78189785 - Cag_1829 - translation initiation factor IF-1 1802 42.40 0 2348495..2349277 - 260 78189786 - Cag_1830 - peptidase M24A 1803 40.92 0 2349286..2350617 - 443 78189787 secY Cag_1831 - preprotein translocase subunit SecY 1804 41.98 0 2350647..2351201 - 184 78189788 rplO Cag_1832 - 50S ribosomal protein L15 1805 35.94 -1 2351236..2351427 - 63 78189789 rpmD Cag_1833 - 50S ribosomal protein L30 1806 40.08 0 2351443..2351961 - 172 78189790 rpsE Cag_1834 - 30S ribosomal protein S5 1807 41.11 0 2351986..2352345 - 119 78189791 rplR Cag_1835 - 50S ribosomal protein L18 1808 42.59 0 2352399..2352938 - 179 78189792 rplF Cag_1836 - 50S ribosomal protein L6 1809 36.62 -1 2352967..2353362 - 131 78189793 rpsH Cag_1837 - 30S ribosomal protein S8 1810 43.33 0 2353423..2353692 - 89 78189794 rpsN Cag_1838 - 30S ribosomal protein S14 1811 40.31 0 2353709..2354296 - 195 78189795 rplE Cag_1839 - 50S ribosomal protein L5 1812 39.09 0 2354358..2354600 - 80 162319769 rplX Cag_1840 - 50S ribosomal protein L24 1813 41.73 0 2354719..2355087 - 122 78189797 rplN Cag_1841 - 50S ribosomal protein L14 1814 40.74 0 2355127..2355396 - 89 78189798 rpsQ Cag_1842 - 30S ribosomal protein S17 1815 39.90 0 2355455..2355652 - 65 78189799 - Cag_1843 - 50S ribosomal protein L29 1816 43.57 0 2355683..2356102 - 139 78189800 rplP Cag_1844 - 50S ribosomal protein L16 1817 42.26 0 2356148..2356909 - 253 78189801 rpsC Cag_1845 - 30S ribosomal protein S3 1818 41.67 0 2356923..2357282 - 119 78189802 rplV Cag_1846 - 50S ribosomal protein L22 1819 40.40 0 2357313..2357609 - 98 78189803 rpsS Cag_1847 - 30S ribosomal protein S19 1820 43.57 0 2357643..2358482 - 279 78189804 rplB Cag_1848 - 50S ribosomal protein L2 1821 41.03 0 2358513..2358824 - 103 78189805 rplW Cag_1849 - 50S ribosomal protein L23 1822 40.35 0 2358855..2359481 - 208 78189806 rplD Cag_1850 - 50S ribosomal protein L4 1823 41.90 0 2359502..2360131 - 209 78189807 rplC Cag_1851 - 50S ribosomal protein L3 1824 41.35 0 2360158..2360469 - 103 78189808 rpsJ Cag_1852 - 30S ribosomal protein S10 1825 44.59 0 2360547..2361728 - 393 78189809 - Cag_1853 - elongation factor Tu 1826 42.08 0 2361788..2363902 - 704 78189810 - Cag_1854 - elongation factor G 1827 41.45 0 2363940..2364407 - 155 78189811 - Cag_1855 - 30S ribosomal protein S7 1828 47.10 0 2364439..2364852 - 137 78189812 rpsL Cag_1856 - 30S ribosomal protein S12 1829 46.35 0 2365057..2367453 - 798 78189813 - Cag_1857 - hypothetical protein 44.16 MEAN 5.32 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0