version 1.0
Cellvibrio japonicus Ueda107, complete genome - 1..4576573 3754 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 685 49.11 0 836242..836856 + 204 192359371 rplD CJA_0700 - ribosomal protein L4/L1 family 686 46.46 -1 836853..837149 + 98 192360193 rplW CJA_0701 - ribosomal protein L23 687 51.09 0 837163..837990 + 275 192359072 rplB CJA_0702 - ribosomal protein L2 688 50.54 0 838025..838303 + 92 192359760 rpsS CJA_0703 - ribosomal protein S19 689 48.65 0 838316..838648 + 110 192361611 rplV CJA_0704 - ribosomal protein L22 690 50.37 0 838660..839340 + 226 192362436 rpsC CJA_0705 - ribosomal protein S3 691 51.21 0 839353..839766 + 137 192360491 rplP CJA_0706 - ribosomal protein L16 692 43.59 -1 839763..839957 + 64 192361324 rpmC CJA_0707 - ribosomal protein L29 693 44.19 -1 839959..840225 + 88 192361056 rpsQ CJA_0708 - ribosomal protein S17 694 47.97 0 840263..840631 + 122 192361879 rplN CJA_0709 - ribosomal protein L14 695 44.65 -1 840666..840983 + 105 192361783 rplX CJA_0710 - ribosomal protein L24 696 47.41 0 840990..841529 + 179 192359103 rplE CJA_0711 - 50S ribosomal protein L5 697 50.98 0 841540..841845 + 101 192360599 rpsN CJA_0712 - ribosomal protein S14p/S29e 698 48.09 0 841876..842268 + 130 192359508 rpsH CJA_0713 - ribosomal protein S8 699 48.50 0 842282..842815 + 177 192360852 rplF CJA_0714 - 50S ribosomal protein L6 700 51.57 0 842825..843175 + 116 192359756 rplR CJA_0715 - ribosomal protein L18 701 47.76 0 843185..843697 + 170 192359431 rpsE CJA_0716 - ribosomal protein S5 702 46.88 0 843727..843918 + 63 192360262 rpmD CJA_0717 - ribosomal protein L30 703 49.66 0 843920..844354 + 144 192361117 rplO CJA_0718 - ribosomal protein L15 704 47.01 0 844365..845702 + 445 192361952 - CJA_0719 - preprotein translocase, SecY subunit 705 47.01 0 845725..845841 + 38 192360307 - CJA_0720 - ribosomal protein L36 706 51.26 0 846063..846419 + 118 192360555 rpsM CJA_0721 - ribosomal protein S13p/S18e 707 51.77 0 846471..846866 + 131 192359683 rpsK CJA_0722 - ribosomal protein S11 708 48.63 0 846882..847502 + 206 192359460 rpsD CJA_0723 - ribosomal protein S4 709 50.05 0 847529..848515 + 328 192362391 rpoA CJA_0724 - DNA-directed RNA polymerase, alpha subunit 710 52.63 0 848612..849010 + 132 192360936 rplQ CJA_0725 - ribosomal protein L17 711 55.72 0 849122..851971 - 949 192360278 uvrA CJA_0726 - excinuclease ABC, A subunit 712 55.85 0 852127..853578 + 483 192360662 - CJA_0727 - major facilitator family transporter 713 53.39 0 853596..854303 + 235 192360087 ssb CJA_0728 - single-stranded DNA-binding protein 714 52.07 0 854494..855534 + 346 192359715 - CJA_0729 - transcriptional regulator, LacI family 715 54.26 0 855637..857184 - 515 192361748 - CJA_0730 - transporter, major facilitator family 716 54.48 0 857232..859643 - 803 192361369 gla15 CJA_0731 - glucan 1,4-alpha-glucosidase, putative, gla15A 717 51.57 0 860170..861792 + 540 192362528 glu13A CJA_0732 - oligo-1,6-glucosidase, putative, glu13A 718 46.37 -1 862198..865020 + 940 192360869 - CJA_0733 - TonB-dependent receptor 719 39.76 -2 865096..865344 + 82 192361663 - CJA_0734 - tryptophan halogenase 720 44.59 -1 865368..867215 + 615 192359172 amy13E CJA_0735 - alpha-amylase, putative, amy13E 721 48.27 0 867278..869353 + 691 192360008 adg97B CJA_0736 - alpha-glucosidase, putative, adg97B 722 49.24 0 869444..871354 + 636 192359891 amy13D CJA_0737 - alpha amylase, putative, amy13D 723 37.50 -2 871525..871620 + 31 192361495 - CJA_0738 - hypothetical protein 724 51.36 0 871692..872168 + 158 192362105 - CJA_0739 - Adenylate cyclase 725 48.28 0 872240..872500 + 86 192359657 - CJA_0740 - predicted membrane protein 726 49.60 0 872535..873284 - 249 192358867 - CJA_0741 - Sec-independent protein translocase TatC 727 59.05 +1 873281..873766 - 161 192359979 - CJA_0742 - TatB 728 50.00 0 873780..874067 - 95 192359122 - CJA_0743 - twin arginine-targeting protein translocase, TatA/E family 729 50.74 0 874090..874428 - 112 192360158 - CJA_0744 - phosphoribosyl-ATP pyrophosphohydrolase 730 52.49 0 874431..874811 - 126 192361358 hisIE CJA_0745 - bifunctional protein phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase 731 58.85 +1 874836..875654 - 272 192362228 - CJA_0746 - oxidoreductase, aldo/keto reductase family 732 59.86 +1 875654..876946 - 430 192359482 - CJA_0747 - oxidoreductase, FAD-binding 733 55.98 0 877081..877950 + 289 192358864 - CJA_0748 - dTDP-4-rhamnose reductase-related protein 734 55.78 0 878026..879237 - 403 192360198 fabB CJA_0749 - beta-ketoacyl-ACP synthase I 735 56.38 0 879356..879880 - 174 192361076 fabA CJA_0750 - beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 736 57.42 0 879990..880952 - 320 192361220 ispB CJA_0751 - octaprenyl-diphosphate synthase 737 53.36 0 881148..881906 - 252 192358911 mtaA CJA_0752 - HetI 738 53.21 0 882051..882548 + 165 192359861 - CJA_0753 - peptidyl-prolyl cis-trans isomerase, FkbP family 739 52.48 0 882698..884974 + 758 192360747 - CJA_0754 - two-component hybrid sensor and regulator 740 48.77 0 884959..887271 + 770 192361575 - CJA_0755 - TonB-dependent receptor 741 50.06 0 887439..888281 + 280 192361091 - CJA_0756 - putative citrate synthase I 742 49.83 0 888295..889155 + 286 192360316 - CJA_0758 - hypothetical protein 743 53.84 0 889152..891755 - 867 192359514 - CJA_0757 - putative signal transduction protein 744 55.44 0 891853..893625 - 590 192362487 - CJA_0759 - putative acetolactate synthase large subunit 745 55.62 0 894135..896885 + 916 192360854 - CJA_0760 - hypothetical protein 746 47.59 0 897040..898224 + 394 192360258 - CJA_0761 - transcriptional regulator, AraC family 747 53.27 0 898266..899519 - 417 192360183 - CJA_0762 - Molybdopterin biosynthesis enzyme 748 54.99 0 899813..901714 - 633 192362484 rpoD CJA_0764 - transcription initiation factor sigma 70 749 58.03 +1 901780..903864 - 694 192361440 dnaG CJA_0765 - DNA primase 750 55.96 0 903932..904426 - 164 192359799 - CJA_0766 - GatB/Yqey domain superfamily 751 53.24 0 904491..904706 - 71 192359130 rpsU CJA_0767 - ribosomal protein S21 752 56.75 0 904920..905948 + 342 192361453 gcp CJA_0768 - O-sialoglycoprotein endopeptidase 753 54.40 0 905959..906333 + 124 192360870 folB CJA_0769 - dihydroneopterin aldolase 754 49.71 0 906330..906848 + 172 192362205 folK-2 CJA_0770 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 755 52.32 0 906894..907862 - 322 192361349 - CJA_0771 - putative magnesium and cobalt transport protein CorA 756 55.56 0 907879..908625 - 248 192362180 - CJA_0772 - oxidoreductase, short chain dehydrogenase/reductase family 757 55.53 0 908648..909967 - 439 192361371 cca CJA_0773 - tRNA nucleotidyltransferase 758 49.76 0 910258..911280 + 340 192360017 - CJA_0774 - Integral membrane protein DUF6 domain protein 759 45.20 -1 911510..912175 + 221 192359119 - CJA_0775 - hypothetical protein 760 39.60 -2 912269..914359 + 696 192359532 - CJA_0776 - hypothetical protein 761 55.11 0 915128..916174 + 348 192360705 - CJA_0777 - UDP-glucose 4-epimerase 762 57.17 0 916572..919772 + 1066 192361222 cbp32A CJA_0778 - carbohydrate binding protein, putative, cbp32A 763 49.71 0 919862..920551 - 229 192360494 - CJA_0779 - hypothetical protein 764 47.14 0 920545..921696 + 383 192361576 - CJA_0780 - ISCja2, transposase 765 57.67 +1 922327..923715 - 462 192362360 phoQ CJA_0781 - Sensory transduction histidine kinase 766 56.87 0 923718..924401 - 227 192359014 phoP CJA_0782 - DNA-binding response regulator 767 57.38 0 924425..924844 - 139 192360100 - CJA_0783 - hypothetical protein 768 60.85 +1 924915..925499 - 194 192360770 - CJA_0784 - hypothetical protein 769 57.31 0 925770..927041 + 423 192361836 proA CJA_0785 - gamma-glutamyl phosphate reductase 770 62.74 +1 927060..927695 + 211 192362352 nadD CJA_0786 - nicotinate (nicotinamide) nucleotide adenylyltransferase 771 53.12 0 927723..928091 + 122 192359651 - CJA_0787 - iojap domain protein 772 56.84 0 928179..928697 + 172 192360291 - CJA_0788 - conserved hypothetical protein TIGR00246 773 56.04 0 928733..930736 + 667 192360908 mrdA-2 CJA_0789 - penicillin-binding protein 2 774 56.97 0 930733..931887 + 384 192361472 rodA CJA_0790 - rod shape-determining protein RodA 775 51.85 0 931910..932908 + 332 192361833 plt103A CJA_0791 - peptidoglycan lytic transglycosylase, putative, plt103A 776 53.97 0 932946..933827 + 293 192359125 - CJA_0792 - Six5 777 52.87 0 933931..935148 + 405 192360123 - CJA_0793 - D-alanyl-D-alanine carboxypeptidase family 778 52.89 0 935217..935804 - 195 192362288 - CJA_0794 - thioredoxin family protein 779 55.68 0 935895..936167 + 90 192359538 - CJA_0795 - hypothetical protein 780 56.64 0 936168..936815 + 215 192360649 lipB CJA_0796 - lipoate-protein ligase B 781 54.78 0 936876..937910 + 344 192360748 lipA CJA_0797 - lipoic acid synthetase 782 54.00 0 938052..938564 + 170 192361785 - CJA_0798 - putative acetyltransferase, GNAT family 783 47.46 0 938950..942375 + 1141 192359097 gly43E CJA_0799 - beta-xylosidase/alpha-L-arabinfuranosidase, putative, gly43E 784 46.46 -1 942508..945333 + 941 192360025 - CJA_0800 - putative TonB-dependent receptor 52.09 MEAN 5.42 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0