IslandPath Analysis: Cellvibrio japonicus Ueda107



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 52.09   STD DEV: 5.42
Cellvibrio japonicus Ueda107, complete genome - 1..4576573
3754 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
674	 48.71	0	819709..820404	+	231	192361282	rplA	CJA_0689	-	ribosomal protein L1
675	 53.94	0	820628..821122	+	164	192362406	-	CJA_0690	-	50S ribosomal protein L10
676	 44.72	-1	821189..821557	+	122	192359450	rplL	CJA_0691	-	ribosomal protein L7/L12
677	 50.61	0	821813..825898	+	1361	192360775	rpoB	CJA_0692	-	DNA-directed RNA polymerase, beta subunit
678	 52.93	0	825925..830241	+	1438	192361594	rpoC	CJA_0693	-	DNA-directed RNA polymerase, beta' subunit
679	 52.45	0	830509..830895	+	128	192359064	rpsL	CJA_0694	-	ribosomal protein S12
680	 51.38	0	831020..831490	+	156	192359877	rpsG	CJA_0695	-	ribosomal protein S7
681	 52.29	0	831568..833688	+	706	192361290	-	CJA_0696	-	translation elongation factor G
682	 54.17	0	833725..834948	+	407	192362181	-	CJA_0697	-	translation elongation factor Tu
683	 49.04	0	835167..835478	+	103	192359612	rpsJ	CJA_0698	-	ribosomal protein S10
684	 51.01	0	835577..836221	+	214	192360421	rplC	CJA_0699	-	ribosomal protein L3
685	 49.11	0	836242..836856	+	204	192359371	rplD	CJA_0700	-	ribosomal protein L4/L1 family
686	 46.46	-1	836853..837149	+	98	192360193	rplW	CJA_0701	-	ribosomal protein L23
687	 51.09	0	837163..837990	+	275	192359072	rplB	CJA_0702	-	ribosomal protein L2
688	 50.54	0	838025..838303	+	92	192359760	rpsS	CJA_0703	-	ribosomal protein S19
689	 48.65	0	838316..838648	+	110	192361611	rplV	CJA_0704	-	ribosomal protein L22
690	 50.37	0	838660..839340	+	226	192362436	rpsC	CJA_0705	-	ribosomal protein S3
691	 51.21	0	839353..839766	+	137	192360491	rplP	CJA_0706	-	ribosomal protein L16
692	 43.59	-1	839763..839957	+	64	192361324	rpmC	CJA_0707	-	ribosomal protein L29
693	 44.19	-1	839959..840225	+	88	192361056	rpsQ	CJA_0708	-	ribosomal protein S17
694	 47.97	0	840263..840631	+	122	192361879	rplN	CJA_0709	-	ribosomal protein L14
695	 44.65	-1	840666..840983	+	105	192361783	rplX	CJA_0710	-	ribosomal protein L24
696	 47.41	0	840990..841529	+	179	192359103	rplE	CJA_0711	-	50S ribosomal protein L5
697	 50.98	0	841540..841845	+	101	192360599	rpsN	CJA_0712	-	ribosomal protein S14p/S29e
698	 48.09	0	841876..842268	+	130	192359508	rpsH	CJA_0713	-	ribosomal protein S8
699	 48.50	0	842282..842815	+	177	192360852	rplF	CJA_0714	-	50S ribosomal protein L6
700	 51.57	0	842825..843175	+	116	192359756	rplR	CJA_0715	-	ribosomal protein L18
701	 47.76	0	843185..843697	+	170	192359431	rpsE	CJA_0716	-	ribosomal protein S5
702	 46.88	0	843727..843918	+	63	192360262	rpmD	CJA_0717	-	ribosomal protein L30
703	 49.66	0	843920..844354	+	144	192361117	rplO	CJA_0718	-	ribosomal protein L15
704	 47.01	0	844365..845702	+	445	192361952	-	CJA_0719	-	preprotein translocase, SecY subunit
705	 47.01	0	845725..845841	+	38	192360307	-	CJA_0720	-	ribosomal protein L36
706	 51.26	0	846063..846419	+	118	192360555	rpsM	CJA_0721	-	ribosomal protein S13p/S18e
707	 51.77	0	846471..846866	+	131	192359683	rpsK	CJA_0722	-	ribosomal protein S11
708	 48.63	0	846882..847502	+	206	192359460	rpsD	CJA_0723	-	ribosomal protein S4
709	 50.05	0	847529..848515	+	328	192362391	rpoA	CJA_0724	-	DNA-directed RNA polymerase, alpha subunit
710	 52.63	0	848612..849010	+	132	192360936	rplQ	CJA_0725	-	ribosomal protein L17
711	 55.72	0	849122..851971	-	949	192360278	uvrA	CJA_0726	-	excinuclease ABC, A subunit
712	 55.85	0	852127..853578	+	483	192360662	-	CJA_0727	-	major facilitator family transporter
713	 53.39	0	853596..854303	+	235	192360087	ssb	CJA_0728	-	single-stranded DNA-binding protein
714	 52.07	0	854494..855534	+	346	192359715	-	CJA_0729	-	transcriptional regulator, LacI family
715	 54.26	0	855637..857184	-	515	192361748	-	CJA_0730	-	transporter, major facilitator family
716	 54.48	0	857232..859643	-	803	192361369	gla15	CJA_0731	-	glucan 1,4-alpha-glucosidase, putative, gla15A
717	 51.57	0	860170..861792	+	540	192362528	glu13A	CJA_0732	-	oligo-1,6-glucosidase, putative, glu13A
718	 46.37	-1	862198..865020	+	940	192360869	-	CJA_0733	-	TonB-dependent receptor
719	 39.76	-2	865096..865344	+	82	192361663	-	CJA_0734	-	tryptophan halogenase
720	 44.59	-1	865368..867215	+	615	192359172	amy13E	CJA_0735	-	alpha-amylase, putative, amy13E
721	 48.27	0	867278..869353	+	691	192360008	adg97B	CJA_0736	-	alpha-glucosidase, putative, adg97B
722	 49.24	0	869444..871354	+	636	192359891	amy13D	CJA_0737	-	alpha amylase, putative, amy13D
723	 37.50	-2	871525..871620	+	31	192361495	-	CJA_0738	-	hypothetical protein
724	 51.36	0	871692..872168	+	158	192362105	-	CJA_0739	-	Adenylate cyclase
725	 48.28	0	872240..872500	+	86	192359657	-	CJA_0740	-	predicted membrane protein
726	 49.60	0	872535..873284	-	249	192358867	-	CJA_0741	-	Sec-independent protein translocase TatC
727	 59.05	+1	873281..873766	-	161	192359979	-	CJA_0742	-	TatB
728	 50.00	0	873780..874067	-	95	192359122	-	CJA_0743	-	twin arginine-targeting protein translocase, TatA/E family
729	 50.74	0	874090..874428	-	112	192360158	-	CJA_0744	-	phosphoribosyl-ATP pyrophosphohydrolase
730	 52.49	0	874431..874811	-	126	192361358	hisIE	CJA_0745	-	bifunctional protein phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase
731	 58.85	+1	874836..875654	-	272	192362228	-	CJA_0746	-	oxidoreductase, aldo/keto reductase family
732	 59.86	+1	875654..876946	-	430	192359482	-	CJA_0747	-	oxidoreductase, FAD-binding
733	 55.98	0	877081..877950	+	289	192358864	-	CJA_0748	-	dTDP-4-rhamnose reductase-related protein
734	 55.78	0	878026..879237	-	403	192360198	fabB	CJA_0749	-	beta-ketoacyl-ACP synthase I
735	 56.38	0	879356..879880	-	174	192361076	fabA	CJA_0750	-	beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA
736	 57.42	0	879990..880952	-	320	192361220	ispB	CJA_0751	-	octaprenyl-diphosphate synthase
737	 53.36	0	881148..881906	-	252	192358911	mtaA	CJA_0752	-	HetI
738	 53.21	0	882051..882548	+	165	192359861	-	CJA_0753	-	peptidyl-prolyl cis-trans isomerase, FkbP family
739	 52.48	0	882698..884974	+	758	192360747	-	CJA_0754	-	two-component hybrid sensor and regulator
740	 48.77	0	884959..887271	+	770	192361575	-	CJA_0755	-	TonB-dependent receptor
741	 50.06	0	887439..888281	+	280	192361091	-	CJA_0756	-	putative citrate synthase I
742	 49.83	0	888295..889155	+	286	192360316	-	CJA_0758	-	hypothetical protein
743	 53.84	0	889152..891755	-	867	192359514	-	CJA_0757	-	putative signal transduction protein
744	 55.44	0	891853..893625	-	590	192362487	-	CJA_0759	-	putative acetolactate synthase large subunit
745	 55.62	0	894135..896885	+	916	192360854	-	CJA_0760	-	hypothetical protein
746	 47.59	0	897040..898224	+	394	192360258	-	CJA_0761	-	transcriptional regulator, AraC family
747	 53.27	0	898266..899519	-	417	192360183	-	CJA_0762	-	Molybdopterin biosynthesis enzyme
748	 54.99	0	899813..901714	-	633	192362484	rpoD	CJA_0764	-	transcription initiation factor sigma 70
749	 58.03	+1	901780..903864	-	694