version 1.0
Cellvibrio japonicus Ueda107, complete genome - 1..4576573 3754 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 661 52.24 0 802435..802926 + 163 192360784 ilvN CJA_0665 - acetolactate synthase, small subunit 662 54.26 0 802990..803553 + 187 192361063 - CJA_0666 - possible DNA-3-methyladenine glycosidase 663 53.04 0 803554..804492 - 312 192359936 - CJA_0667 - LysR substrate binding domain protein 664 51.82 0 804589..805605 + 338 192359381 ilvC CJA_0668 - ketol-acid reductoisomerase 665 50.18 0 805687..806541 + 284 192360686 pssA CJA_0669 - phosphatidylserine synthase 666 44.12 -1 812609..813748 + 379 192360177 alr CJA_0676 - alanine racemase 667 46.97 0 813752..814756 + 334 192359865 - CJA_0677 - biotin-[acetyl-CoA-carboxylase] ligase 668 48.48 0 814753..815511 + 252 192358841 - CJA_0678 - transcriptional activator, putative, Baf family 669 43.73 -1 815517..816218 + 233 192361510 - CJA_0679 - Sporulation related repeat family 670 54.17 0 816845..818068 + 407 192360445 - CJA_0684 - translation elongation factor Tu 671 46.88 0 818209..818577 + 122 192360407 secE CJA_0686 - preprotein translocase, SecE subunit 672 46.25 -1 818585..819118 + 177 192359543 nusG CJA_0687 - transcription termination/antitermination factor NusG 673 50.23 0 819275..819706 + 143 192362091 rplK CJA_0688 - ribosomal protein L11 674 48.71 0 819709..820404 + 231 192361282 rplA CJA_0689 - ribosomal protein L1 675 53.94 0 820628..821122 + 164 192362406 - CJA_0690 - 50S ribosomal protein L10 676 44.72 -1 821189..821557 + 122 192359450 rplL CJA_0691 - ribosomal protein L7/L12 677 50.61 0 821813..825898 + 1361 192360775 rpoB CJA_0692 - DNA-directed RNA polymerase, beta subunit 678 52.93 0 825925..830241 + 1438 192361594 rpoC CJA_0693 - DNA-directed RNA polymerase, beta' subunit 679 52.45 0 830509..830895 + 128 192359064 rpsL CJA_0694 - ribosomal protein S12 680 51.38 0 831020..831490 + 156 192359877 rpsG CJA_0695 - ribosomal protein S7 681 52.29 0 831568..833688 + 706 192361290 - CJA_0696 - translation elongation factor G 682 54.17 0 833725..834948 + 407 192362181 - CJA_0697 - translation elongation factor Tu 683 49.04 0 835167..835478 + 103 192359612 rpsJ CJA_0698 - ribosomal protein S10 684 51.01 0 835577..836221 + 214 192360421 rplC CJA_0699 - ribosomal protein L3 685 49.11 0 836242..836856 + 204 192359371 rplD CJA_0700 - ribosomal protein L4/L1 family 686 46.46 -1 836853..837149 + 98 192360193 rplW CJA_0701 - ribosomal protein L23 687 51.09 0 837163..837990 + 275 192359072 rplB CJA_0702 - ribosomal protein L2 688 50.54 0 838025..838303 + 92 192359760 rpsS CJA_0703 - ribosomal protein S19 689 48.65 0 838316..838648 + 110 192361611 rplV CJA_0704 - ribosomal protein L22 690 50.37 0 838660..839340 + 226 192362436 rpsC CJA_0705 - ribosomal protein S3 691 51.21 0 839353..839766 + 137 192360491 rplP CJA_0706 - ribosomal protein L16 692 43.59 -1 839763..839957 + 64 192361324 rpmC CJA_0707 - ribosomal protein L29 693 44.19 -1 839959..840225 + 88 192361056 rpsQ CJA_0708 - ribosomal protein S17 694 47.97 0 840263..840631 + 122 192361879 rplN CJA_0709 - ribosomal protein L14 695 44.65 -1 840666..840983 + 105 192361783 rplX CJA_0710 - ribosomal protein L24 696 47.41 0 840990..841529 + 179 192359103 rplE CJA_0711 - 50S ribosomal protein L5 697 50.98 0 841540..841845 + 101 192360599 rpsN CJA_0712 - ribosomal protein S14p/S29e 698 48.09 0 841876..842268 + 130 192359508 rpsH CJA_0713 - ribosomal protein S8 699 48.50 0 842282..842815 + 177 192360852 rplF CJA_0714 - 50S ribosomal protein L6 700 51.57 0 842825..843175 + 116 192359756 rplR CJA_0715 - ribosomal protein L18 701 47.76 0 843185..843697 + 170 192359431 rpsE CJA_0716 - ribosomal protein S5 702 46.88 0 843727..843918 + 63 192360262 rpmD CJA_0717 - ribosomal protein L30 703 49.66 0 843920..844354 + 144 192361117 rplO CJA_0718 - ribosomal protein L15 704 47.01 0 844365..845702 + 445 192361952 - CJA_0719 - preprotein translocase, SecY subunit 705 47.01 0 845725..845841 + 38 192360307 - CJA_0720 - ribosomal protein L36 706 51.26 0 846063..846419 + 118 192360555 rpsM CJA_0721 - ribosomal protein S13p/S18e 707 51.77 0 846471..846866 + 131 192359683 rpsK CJA_0722 - ribosomal protein S11 708 48.63 0 846882..847502 + 206 192359460 rpsD CJA_0723 - ribosomal protein S4 709 50.05 0 847529..848515 + 328 192362391 rpoA CJA_0724 - DNA-directed RNA polymerase, alpha subunit 710 52.63 0 848612..849010 + 132 192360936 rplQ CJA_0725 - ribosomal protein L17 711 55.72 0 849122..851971 - 949 192360278 uvrA CJA_0726 - excinuclease ABC, A subunit 712 55.85 0 852127..853578 + 483 192360662 - CJA_0727 - major facilitator family transporter 713 53.39 0 853596..854303 + 235 192360087 ssb CJA_0728 - single-stranded DNA-binding protein 714 52.07 0 854494..855534 + 346 192359715 - CJA_0729 - transcriptional regulator, LacI family 715 54.26 0 855637..857184 - 515 192361748 - CJA_0730 - transporter, major facilitator family 716 54.48 0 857232..859643 - 803 192361369 gla15 CJA_0731 - glucan 1,4-alpha-glucosidase, putative, gla15A 717 51.57 0 860170..861792 + 540 192362528 glu13A CJA_0732 - oligo-1,6-glucosidase, putative, glu13A 718 46.37 -1 862198..865020 + 940 192360869 - CJA_0733 - TonB-dependent receptor 719 39.76 -2 865096..865344 + 82 192361663 - CJA_0734 - tryptophan halogenase 720 44.59 -1 865368..867215 + 615 192359172 amy13E CJA_0735 - alpha-amylase, putative, amy13E 721 48.27 0 867278..869353 + 691 192360008 adg97B CJA_0736 - alpha-glucosidase, putative, adg97B 722 49.24 0 869444..871354 + 636 192359891 amy13D CJA_0737 - alpha amylase, putative, amy13D 723 37.50 -2 871525..871620 + 31 192361495 - CJA_0738 - hypothetical protein 724 51.36 0 871692..872168 + 158 192362105 - CJA_0739 - Adenylate cyclase 725 48.28 0 872240..872500 + 86 192359657 - CJA_0740 - predicted membrane protein 726 49.60 0 872535..873284 - 249 192358867 - CJA_0741 - Sec-independent protein translocase TatC 727 59.05 +1 873281..873766 - 161 192359979 - CJA_0742 - TatB 728 50.00 0 873780..874067 - 95 192359122 - CJA_0743 - twin arginine-targeting protein translocase, TatA/E family 729 50.74 0 874090..874428 - 112 192360158 - CJA_0744 - phosphoribosyl-ATP pyrophosphohydrolase 730 52.49 0 874431..874811 - 126 192361358 hisIE CJA_0745 - bifunctional protein phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase 731 58.85 +1 874836..875654 - 272 192362228 - CJA_0746 - oxidoreductase, aldo/keto reductase family 732 59.86 +1 875654..876946 - 430 192359482 - CJA_0747 - oxidoreductase, FAD-binding 733 55.98 0 877081..877950 + 289 192358864 - CJA_0748 - dTDP-4-rhamnose reductase-related protein 734 55.78 0 878026..879237 - 403 192360198 fabB CJA_0749 - beta-ketoacyl-ACP synthase I 735 56.38 0 879356..879880 - 174 192361076 fabA CJA_0750 - beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 736 57.42 0 879990..880952 - 320 192361220 ispB CJA_0751 - octaprenyl-diphosphate synthase 737 53.36 0 881148..881906 - 252 192358911 mtaA CJA_0752 - HetI 738 53.21 0 882051..882548 + 165 192359861 - CJA_0753 - peptidyl-prolyl cis-trans isomerase, FkbP family 739 52.48 0 882698..884974 + 758 192360747 - CJA_0754 - two-component hybrid sensor and regulator 740 48.77 0 884959..887271 + 770 192361575 - CJA_0755 - TonB-dependent receptor 741 50.06 0 887439..888281 + 280 192361091 - CJA_0756 - putative citrate synthase I 742 49.83 0 888295..889155 + 286 192360316 - CJA_0758 - hypothetical protein 743 53.84 0 889152..891755 - 867 192359514 - CJA_0757 - putative signal transduction protein 744 55.44 0 891853..893625 - 590 192362487 - CJA_0759 - putative acetolactate synthase large subunit 745 55.62 0 894135..896885 + 916 192360854 - CJA_0760 - hypothetical protein 746 47.59 0 897040..898224 + 394 192360258 - CJA_0761 - transcriptional regulator, AraC family 747 53.27 0 898266..899519 - 417 192360183 - CJA_0762 - Molybdopterin biosynthesis enzyme 748 54.99 0 899813..901714 - 633 192362484 rpoD CJA_0764 - transcription initiation factor sigma 70 749 58.03 +1 901780..903864 - 694 192361440 dnaG CJA_0765 - DNA primase 750 55.96 0 903932..904426 - 164 192359799 - CJA_0766 - GatB/Yqey domain superfamily 751 53.24 0 904491..904706 - 71 192359130 rpsU CJA_0767 - ribosomal protein S21 752 56.75 0 904920..905948 + 342 192361453 gcp CJA_0768 - O-sialoglycoprotein endopeptidase 753 54.40 0 905959..906333 + 124 192360870 folB CJA_0769 - dihydroneopterin aldolase 754 49.71 0 906330..906848 + 172 192362205 folK-2 CJA_0770 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 755 52.32 0 906894..907862 - 322 192361349 - CJA_0771 - putative magnesium and cobalt transport protein CorA 756 55.56 0 907879..908625 - 248 192362180 - CJA_0772 - oxidoreductase, short chain dehydrogenase/reductase family 757 55.53 0 908648..909967 - 439 192361371 cca CJA_0773 - tRNA nucleotidyltransferase 758 49.76 0 910258..911280 + 340 192360017 - CJA_0774 - Integral membrane protein DUF6 domain protein 759 45.20 -1 911510..912175 + 221 192359119 - CJA_0775 - hypothetical protein 760 39.60 -2 912269..914359 + 696 192359532 - CJA_0776 - hypothetical protein 52.09 MEAN 5.42 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0