version 1.0
Cellvibrio japonicus Ueda107, complete genome - 1..4576573 3754 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 624 57.81 +1 760137..761423 + 428 192361288 aroA CJA_0627 - 3-phosphoshikimate 1-carboxyvinyltransferase 625 52.38 0 761423..761842 + 139 192362303 - CJA_0628 - thioesterase family protein domain protein 626 45.86 -1 762136..762678 + 180 192358953 - CJA_0629 - PEP-CTERM putative exosortase interaction domain protein 627 52.68 0 762865..763536 - 223 192360159 - CJA_0630 - hypothetical protein 628 51.13 0 763689..764576 - 295 192361789 - CJA_0631 - Domain of unknown function (306) family 629 49.13 0 764567..766402 + 611 192362483 - CJA_0632 - putative DNA helicase II 630 47.22 0 767378..768529 + 383 192360303 - CJA_0634 - ISCja2, transposase 631 49.16 0 768417..769673 - 418 192359261 - CJA_0633 - Piwi domain protein 632 55.77 0 769670..771541 - 623 192360229 - CJA_0635 - hypothetical protein 633 49.66 0 771596..773983 - 795 192361516 - CJA_0636 - type I restriction-modification system, S subunit 634 55.05 0 773976..775034 - 352 192362336 rhuM CJA_0637 - RhuM-like protein 635 54.31 0 775031..776503 - 490 192360754 hsdM CJA_0638 - type I restriction-modification system, M subunit 636 51.61 0 776516..778906 - 796 192359896 - CJA_0639 - type I restriction-modification system, R subunit 637 55.04 0 778979..779236 - 85 192362493 - CJA_0640 - hypothetical protein 638 54.85 0 779435..780526 - 363 192362469 ychF CJA_0641 - GTP-binding protein YchF 639 58.47 +1 780594..781337 - 247 192361428 pth CJA_0642 - peptidyl-tRNA hydrolase 640 53.43 0 781312..781923 - 203 192359843 - CJA_0643 - ribosomal protein L25, Ctc-form 641 57.43 0 782022..782963 - 313 192358855 prs CJA_0644 - ribose-phosphate pyrophosphokinase 642 56.74 0 783295..784140 - 281 192362184 ispE CJA_0646 - 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 643 62.25 +1 784143..784754 - 203 192361569 lolB CJA_0647 - outer membrane lipoprotein LolB 644 61.14 +1 784754..786580 - 608 192359864 - CJA_0648 - TPR domain protein 645 55.56 0 786672..786770 + 32 192360846 - CJA_0649 - hypothetical protein 646 62.45 +1 786858..787403 - 181 192360456 - CJA_0650 - hypothetical protein 647 56.26 0 787459..788832 + 457 192359597 hemA CJA_0651 - glutamyl-tRNA reductase 648 55.12 0 788829..789911 + 360 192360464 prfA CJA_0652 - peptide chain release factor 1 649 58.65 +1 789968..790765 + 265 192359316 - CJA_0653 - methyltransferase, HemK family 650 60.13 +1 790768..791532 + 254 192362250 moeB CJA_0654 - molybdopterin biosynthesis MoeB protein 651 51.19 0 791683..793026 + 447 192361233 - CJA_0655 - hypothetical protein 652 53.91 0 793051..794289 + 412 192361033 - CJA_0656 - peptidase, M48 family 653 55.69 0 794363..795364 - 333 192359960 - CJA_0657 - kinase, pfkB family 654 50.67 0 795357..795506 + 49 192359581 - CJA_0658 - hypothetical protein 655 55.71 0 795529..797865 + 778 192361085 gt51C CJA_0659 - murein polymerase, putative, gt51C 656 55.42 0 798035..798754 + 239 192359705 - CJA_0660 - hypothetical protein 657 56.83 0 798759..799307 + 182 192360493 algT CJA_0661 - RNA polymerase ECF-type sigma factor 658 48.97 0 799334..799672 + 112 192361600 - CJA_0662 - hypothetical protein 659 51.88 0 799770..800222 - 150 192360450 - CJA_0663 - hypothetical protein 660 52.84 0 800619..802433 + 604 192361818 ilvB CJA_0664 - acetolactate synthase, large subunit, biosynthetic type 661 52.24 0 802435..802926 + 163 192360784 ilvN CJA_0665 - acetolactate synthase, small subunit 662 54.26 0 802990..803553 + 187 192361063 - CJA_0666 - possible DNA-3-methyladenine glycosidase 663 53.04 0 803554..804492 - 312 192359936 - CJA_0667 - LysR substrate binding domain protein 664 51.82 0 804589..805605 + 338 192359381 ilvC CJA_0668 - ketol-acid reductoisomerase 665 50.18 0 805687..806541 + 284 192360686 pssA CJA_0669 - phosphatidylserine synthase 666 44.12 -1 812609..813748 + 379 192360177 alr CJA_0676 - alanine racemase 667 46.97 0 813752..814756 + 334 192359865 - CJA_0677 - biotin-[acetyl-CoA-carboxylase] ligase 668 48.48 0 814753..815511 + 252 192358841 - CJA_0678 - transcriptional activator, putative, Baf family 669 43.73 -1 815517..816218 + 233 192361510 - CJA_0679 - Sporulation related repeat family 670 54.17 0 816845..818068 + 407 192360445 - CJA_0684 - translation elongation factor Tu 671 46.88 0 818209..818577 + 122 192360407 secE CJA_0686 - preprotein translocase, SecE subunit 672 46.25 -1 818585..819118 + 177 192359543 nusG CJA_0687 - transcription termination/antitermination factor NusG 673 50.23 0 819275..819706 + 143 192362091 rplK CJA_0688 - ribosomal protein L11 674 48.71 0 819709..820404 + 231 192361282 rplA CJA_0689 - ribosomal protein L1 675 53.94 0 820628..821122 + 164 192362406 - CJA_0690 - 50S ribosomal protein L10 676 44.72 -1 821189..821557 + 122 192359450 rplL CJA_0691 - ribosomal protein L7/L12 677 50.61 0 821813..825898 + 1361 192360775 rpoB CJA_0692 - DNA-directed RNA polymerase, beta subunit 678 52.93 0 825925..830241 + 1438 192361594 rpoC CJA_0693 - DNA-directed RNA polymerase, beta' subunit 679 52.45 0 830509..830895 + 128 192359064 rpsL CJA_0694 - ribosomal protein S12 680 51.38 0 831020..831490 + 156 192359877 rpsG CJA_0695 - ribosomal protein S7 681 52.29 0 831568..833688 + 706 192361290 - CJA_0696 - translation elongation factor G 682 54.17 0 833725..834948 + 407 192362181 - CJA_0697 - translation elongation factor Tu 683 49.04 0 835167..835478 + 103 192359612 rpsJ CJA_0698 - ribosomal protein S10 684 51.01 0 835577..836221 + 214 192360421 rplC CJA_0699 - ribosomal protein L3 685 49.11 0 836242..836856 + 204 192359371 rplD CJA_0700 - ribosomal protein L4/L1 family 686 46.46 -1 836853..837149 + 98 192360193 rplW CJA_0701 - ribosomal protein L23 687 51.09 0 837163..837990 + 275 192359072 rplB CJA_0702 - ribosomal protein L2 688 50.54 0 838025..838303 + 92 192359760 rpsS CJA_0703 - ribosomal protein S19 689 48.65 0 838316..838648 + 110 192361611 rplV CJA_0704 - ribosomal protein L22 690 50.37 0 838660..839340 + 226 192362436 rpsC CJA_0705 - ribosomal protein S3 691 51.21 0 839353..839766 + 137 192360491 rplP CJA_0706 - ribosomal protein L16 692 43.59 -1 839763..839957 + 64 192361324 rpmC CJA_0707 - ribosomal protein L29 693 44.19 -1 839959..840225 + 88 192361056 rpsQ CJA_0708 - ribosomal protein S17 694 47.97 0 840263..840631 + 122 192361879 rplN CJA_0709 - ribosomal protein L14 695 44.65 -1 840666..840983 + 105 192361783 rplX CJA_0710 - ribosomal protein L24 696 47.41 0 840990..841529 + 179 192359103 rplE CJA_0711 - 50S ribosomal protein L5 697 50.98 0 841540..841845 + 101 192360599 rpsN CJA_0712 - ribosomal protein S14p/S29e 698 48.09 0 841876..842268 + 130 192359508 rpsH CJA_0713 - ribosomal protein S8 699 48.50 0 842282..842815 + 177 192360852 rplF CJA_0714 - 50S ribosomal protein L6 700 51.57 0 842825..843175 + 116 192359756 rplR CJA_0715 - ribosomal protein L18 701 47.76 0 843185..843697 + 170 192359431 rpsE CJA_0716 - ribosomal protein S5 702 46.88 0 843727..843918 + 63 192360262 rpmD CJA_0717 - ribosomal protein L30 703 49.66 0 843920..844354 + 144 192361117 rplO CJA_0718 - ribosomal protein L15 704 47.01 0 844365..845702 + 445 192361952 - CJA_0719 - preprotein translocase, SecY subunit 705 47.01 0 845725..845841 + 38 192360307 - CJA_0720 - ribosomal protein L36 706 51.26 0 846063..846419 + 118 192360555 rpsM CJA_0721 - ribosomal protein S13p/S18e 707 51.77 0 846471..846866 + 131 192359683 rpsK CJA_0722 - ribosomal protein S11 708 48.63 0 846882..847502 + 206 192359460 rpsD CJA_0723 - ribosomal protein S4 709 50.05 0 847529..848515 + 328 192362391 rpoA CJA_0724 - DNA-directed RNA polymerase, alpha subunit 710 52.63 0 848612..849010 + 132 192360936 rplQ CJA_0725 - ribosomal protein L17 711 55.72 0 849122..851971 - 949 192360278 uvrA CJA_0726 - excinuclease ABC, A subunit 712 55.85 0 852127..853578 + 483 192360662 - CJA_0727 - major facilitator family transporter 713 53.39 0 853596..854303 + 235 192360087 ssb CJA_0728 - single-stranded DNA-binding protein 714 52.07 0 854494..855534 + 346 192359715 - CJA_0729 - transcriptional regulator, LacI family 715 54.26 0 855637..857184 - 515 192361748 - CJA_0730 - transporter, major facilitator family 716 54.48 0 857232..859643 - 803 192361369 gla15 CJA_0731 - glucan 1,4-alpha-glucosidase, putative, gla15A 717 51.57 0 860170..861792 + 540 192362528 glu13A CJA_0732 - oligo-1,6-glucosidase, putative, glu13A 718 46.37 -1 862198..865020 + 940 192360869 - CJA_0733 - TonB-dependent receptor 719 39.76 -2 865096..865344 + 82 192361663 - CJA_0734 - tryptophan halogenase 720 44.59 -1 865368..867215 + 615 192359172 amy13E CJA_0735 - alpha-amylase, putative, amy13E 721 48.27 0 867278..869353 + 691 192360008 adg97B CJA_0736 - alpha-glucosidase, putative, adg97B 722 49.24 0 869444..871354 + 636 192359891 amy13D CJA_0737 - alpha amylase, putative, amy13D 723 37.50 -2 871525..871620 + 31 192361495 - CJA_0738 - hypothetical protein 52.09 MEAN 5.42 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0