version 1.0
Cellvibrio japonicus Ueda107, complete genome - 1..4576573 3754 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 593 39.30 -2 730292..730576 - 94 192361292 - CJA_0595 - hypothetical protein 594 47.25 0 730801..731310 - 169 192358990 - CJA_0596 - acetyltransferase, GNAT family 595 47.62 0 731532..732308 + 258 192359479 - CJA_0597 - hypothetical protein 596 51.61 0 732525..733394 + 289 192362317 - CJA_0598 - GumN protein superfamily 597 53.54 0 733414..734289 + 291 192361249 - CJA_0599 - ABC transporter, ATP-binding protein 598 52.26 0 734286..735659 + 457 192359165 - CJA_0600 - hypothetical protein 599 56.17 0 735662..736042 + 126 192361862 - CJA_0601 - transcriptional regulator, GntR family 600 55.21 0 736149..737597 + 482 192360829 - CJA_0602 - hydrolase, alpha/beta fold family domain protein 601 53.78 0 737594..738361 + 255 192360469 natA CJA_0603 - sodium ABC transporter ATP-binding protein 602 51.97 0 738348..739538 + 396 192360837 - CJA_0604 - ABC-2 type transporter 603 52.23 0 739583..740143 - 186 192360002 - CJA_0605 - hypothetical protein 604 52.62 0 740170..740646 - 158 192359131 - CJA_0606 - hypothetical protein 605 56.75 0 740903..741265 + 120 192359810 - CJA_0607 - hypothetical protein 606 46.39 -1 741344..741856 + 170 192361109 - CJA_0608 - putative lipoprotein 607 48.05 0 741909..742241 - 110 192361920 - CJA_0609 - hypothetical protein 608 55.03 0 742724..744115 + 463 192361544 cpsA CJA_0610 - capsular polysaccharide biosynthesis protein 609 55.84 0 744158..745312 + 384 192362366 - CJA_0611 - hypothetical protein 610 56.66 0 745364..746572 + 402 192358960 - CJA_0612 - hypothetical protein 611 48.91 0 746668..747489 + 273 192359822 - CJA_0613 - hypothetical protein 612 53.65 0 747542..748294 + 250 192360086 gt25A CJA_0614 - glycosyl transferase, putative, gt25A 613 56.98 0 748332..749921 - 529 192360911 - CJA_0615 - hypothetical protein 614 57.96 +1 749819..750898 - 359 192359403 gt4J-1 CJA_0616 - glycosyl transferase, putative, gt4J 615 62.50 +1 750901..751644 - 247 192359339 gt26A CJA_0617 - glycosyl transferase, putative, gt26A 616 61.21 +1 751641..752813 - 390 192361073 gt70A CJA_0618 - UDP-GlcA beta-glucuronosyltransferase, putative, gt70A 617 62.96 +2 752845..753897 - 350 192360145 cel5H CJA_0619 - endo-1,4-beta glucanase, putative, cel5H 618 62.13 +1 753894..755018 - 374 192362446 gt4J-2 CJA_0620 - glycosyl transferase, putative, gt4J 619 62.69 +1 755021..756301 - 426 192361422 - CJA_0621 - putative GumE protein 620 66.12 +2 756327..757244 - 305 192360402 epsG CJA_0622 - EpsG 621 60.53 +1 757284..758636 - 450 192359319 - CJA_0623 - putative chain length determinant protein EpsF 622 62.01 +1 758682..759497 - 271 192362006 epsE CJA_0624 - EpsE 623 47.75 0 759521..759631 + 36 192360694 - CJA_0625 - hypothetical protein 624 57.81 +1 760137..761423 + 428 192361288 aroA CJA_0627 - 3-phosphoshikimate 1-carboxyvinyltransferase 625 52.38 0 761423..761842 + 139 192362303 - CJA_0628 - thioesterase family protein domain protein 626 45.86 -1 762136..762678 + 180 192358953 - CJA_0629 - PEP-CTERM putative exosortase interaction domain protein 627 52.68 0 762865..763536 - 223 192360159 - CJA_0630 - hypothetical protein 628 51.13 0 763689..764576 - 295 192361789 - CJA_0631 - Domain of unknown function (306) family 629 49.13 0 764567..766402 + 611 192362483 - CJA_0632 - putative DNA helicase II 630 47.22 0 767378..768529 + 383 192360303 - CJA_0634 - ISCja2, transposase 631 49.16 0 768417..769673 - 418 192359261 - CJA_0633 - Piwi domain protein 632 55.77 0 769670..771541 - 623 192360229 - CJA_0635 - hypothetical protein 633 49.66 0 771596..773983 - 795 192361516 - CJA_0636 - type I restriction-modification system, S subunit 634 55.05 0 773976..775034 - 352 192362336 rhuM CJA_0637 - RhuM-like protein 635 54.31 0 775031..776503 - 490 192360754 hsdM CJA_0638 - type I restriction-modification system, M subunit 636 51.61 0 776516..778906 - 796 192359896 - CJA_0639 - type I restriction-modification system, R subunit 637 55.04 0 778979..779236 - 85 192362493 - CJA_0640 - hypothetical protein 638 54.85 0 779435..780526 - 363 192362469 ychF CJA_0641 - GTP-binding protein YchF 639 58.47 +1 780594..781337 - 247 192361428 pth CJA_0642 - peptidyl-tRNA hydrolase 640 53.43 0 781312..781923 - 203 192359843 - CJA_0643 - ribosomal protein L25, Ctc-form 641 57.43 0 782022..782963 - 313 192358855 prs CJA_0644 - ribose-phosphate pyrophosphokinase 642 56.74 0 783295..784140 - 281 192362184 ispE CJA_0646 - 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 643 62.25 +1 784143..784754 - 203 192361569 lolB CJA_0647 - outer membrane lipoprotein LolB 644 61.14 +1 784754..786580 - 608 192359864 - CJA_0648 - TPR domain protein 645 55.56 0 786672..786770 + 32 192360846 - CJA_0649 - hypothetical protein 646 62.45 +1 786858..787403 - 181 192360456 - CJA_0650 - hypothetical protein 647 56.26 0 787459..788832 + 457 192359597 hemA CJA_0651 - glutamyl-tRNA reductase 648 55.12 0 788829..789911 + 360 192360464 prfA CJA_0652 - peptide chain release factor 1 649 58.65 +1 789968..790765 + 265 192359316 - CJA_0653 - methyltransferase, HemK family 650 60.13 +1 790768..791532 + 254 192362250 moeB CJA_0654 - molybdopterin biosynthesis MoeB protein 651 51.19 0 791683..793026 + 447 192361233 - CJA_0655 - hypothetical protein 652 53.91 0 793051..794289 + 412 192361033 - CJA_0656 - peptidase, M48 family 653 55.69 0 794363..795364 - 333 192359960 - CJA_0657 - kinase, pfkB family 654 50.67 0 795357..795506 + 49 192359581 - CJA_0658 - hypothetical protein 655 55.71 0 795529..797865 + 778 192361085 gt51C CJA_0659 - murein polymerase, putative, gt51C 656 55.42 0 798035..798754 + 239 192359705 - CJA_0660 - hypothetical protein 657 56.83 0 798759..799307 + 182 192360493 algT CJA_0661 - RNA polymerase ECF-type sigma factor 658 48.97 0 799334..799672 + 112 192361600 - CJA_0662 - hypothetical protein 659 51.88 0 799770..800222 - 150 192360450 - CJA_0663 - hypothetical protein 660 52.84 0 800619..802433 + 604 192361818 ilvB CJA_0664 - acetolactate synthase, large subunit, biosynthetic type 661 52.24 0 802435..802926 + 163 192360784 ilvN CJA_0665 - acetolactate synthase, small subunit 662 54.26 0 802990..803553 + 187 192361063 - CJA_0666 - possible DNA-3-methyladenine glycosidase 663 53.04 0 803554..804492 - 312 192359936 - CJA_0667 - LysR substrate binding domain protein 664 51.82 0 804589..805605 + 338 192359381 ilvC CJA_0668 - ketol-acid reductoisomerase 665 50.18 0 805687..806541 + 284 192360686 pssA CJA_0669 - phosphatidylserine synthase 666 44.12 -1 812609..813748 + 379 192360177 alr CJA_0676 - alanine racemase 667 46.97 0 813752..814756 + 334 192359865 - CJA_0677 - biotin-[acetyl-CoA-carboxylase] ligase 668 48.48 0 814753..815511 + 252 192358841 - CJA_0678 - transcriptional activator, putative, Baf family 669 43.73 -1 815517..816218 + 233 192361510 - CJA_0679 - Sporulation related repeat family 670 54.17 0 816845..818068 + 407 192360445 - CJA_0684 - translation elongation factor Tu 671 46.88 0 818209..818577 + 122 192360407 secE CJA_0686 - preprotein translocase, SecE subunit 672 46.25 -1 818585..819118 + 177 192359543 nusG CJA_0687 - transcription termination/antitermination factor NusG 673 50.23 0 819275..819706 + 143 192362091 rplK CJA_0688 - ribosomal protein L11 674 48.71 0 819709..820404 + 231 192361282 rplA CJA_0689 - ribosomal protein L1 675 53.94 0 820628..821122 + 164 192362406 - CJA_0690 - 50S ribosomal protein L10 676 44.72 -1 821189..821557 + 122 192359450 rplL CJA_0691 - ribosomal protein L7/L12 677 50.61 0 821813..825898 + 1361 192360775 rpoB CJA_0692 - DNA-directed RNA polymerase, beta subunit 678 52.93 0 825925..830241 + 1438 192361594 rpoC CJA_0693 - DNA-directed RNA polymerase, beta' subunit 679 52.45 0 830509..830895 + 128 192359064 rpsL CJA_0694 - ribosomal protein S12 680 51.38 0 831020..831490 + 156 192359877 rpsG CJA_0695 - ribosomal protein S7 681 52.29 0 831568..833688 + 706 192361290 - CJA_0696 - translation elongation factor G 682 54.17 0 833725..834948 + 407 192362181 - CJA_0697 - translation elongation factor Tu 683 49.04 0 835167..835478 + 103 192359612 rpsJ CJA_0698 - ribosomal protein S10 684 51.01 0 835577..836221 + 214 192360421 rplC CJA_0699 - ribosomal protein L3 685 49.11 0 836242..836856 + 204 192359371 rplD CJA_0700 - ribosomal protein L4/L1 family 686 46.46 -1 836853..837149 + 98 192360193 rplW CJA_0701 - ribosomal protein L23 687 51.09 0 837163..837990 + 275 192359072 rplB CJA_0702 - ribosomal protein L2 688 50.54 0 838025..838303 + 92 192359760 rpsS CJA_0703 - ribosomal protein S19 689 48.65 0 838316..838648 + 110 192361611 rplV CJA_0704 - ribosomal protein L22 690 50.37 0 838660..839340 + 226 192362436 rpsC CJA_0705 - ribosomal protein S3 691 51.21 0 839353..839766 + 137 192360491 rplP CJA_0706 - ribosomal protein L16 692 43.59 -1 839763..839957 + 64 192361324 rpmC CJA_0707 - ribosomal protein L29 52.09 MEAN 5.42 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0