version 1.0
Cellvibrio japonicus Ueda107, complete genome - 1..4576573 3754 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 410 58.02 +1 507875..508765 + 296 192362505 - CJA_0410 - staphylococcal nuclease homolog 411 54.12 0 508779..511241 - 820 192360194 gt51D CJA_0411 - murein polymerase, putative, gt51D 412 50.56 0 511345..512412 + 355 192359466 pilM CJA_0412 - type IV pilus assembly protein PilM 413 45.52 -1 512412..513002 + 196 192359164 pilN CJA_0413 - type 4 fimbrial biogenesis protein PilN 414 43.73 -1 513002..513655 + 217 192362154 pilO CJA_0414 - pilO 415 41.71 -1 513652..514176 + 174 192360736 pilP CJA_0415 - type IV pilus biogenesis protein PilP 416 43.36 -1 514213..516357 + 714 192359937 - CJA_0416 - fimbrial assembly protein PilQ 417 52.95 0 516358..516882 + 174 192361325 - CJA_0417 - shikimate kinase 418 52.75 0 517026..518117 + 363 192360279 aroB CJA_0418 - 3-dehydroquinate synthase 419 55.92 0 518261..519805 + 514 192359671 - CJA_0419 - hypothetical protein 420 54.71 0 519866..520258 - 130 192362429 gcvH CJA_0420 - glycine cleavage system H protein 421 58.33 +1 520301..521416 - 371 192361648 gcvT CJA_0421 - glycine cleavage system T protein 422 57.89 +1 521536..522105 - 189 192360890 - CJA_0422 - YbcL 423 57.28 0 522133..523155 - 340 192359987 - CJA_0423 - hypothetical protein 424 57.07 0 523152..524558 - 468 192359133 - CJA_0424 - trypsin domain protein 425 62.45 +1 524652..525410 - 252 192361736 - CJA_0425 - competence protein ComF 426 56.95 0 525588..526688 + 366 192360896 bioB CJA_0426 - biotin synthase 427 61.35 +1 526721..527923 + 400 192360066 bioF CJA_0427 - 8-amino-7-oxononanoate synthase 428 59.77 +1 527916..529424 + 502 192359126 bioC CJA_0428 - biotin biosynthesis protein BioC 429 62.45 +1 529444..530130 + 228 192362200 bioD CJA_0429 - dethiobiotin synthase 430 56.94 0 530133..530831 + 232 192361335 - CJA_0430 - putative lipoprotein 431 56.93 0 531004..531270 + 88 192361432 - CJA_0431 - Domain of unknown function (DUF1078) family 432 62.67 +1 531284..532159 + 291 192360201 - CJA_0432 - srpA-related protein 433 51.61 0 532489..533079 + 196 192362188 - CJA_0434 - Uncharacterized BCR, YhbC family 434 52.50 0 533180..534661 + 493 192361293 nusA CJA_0435 - N utilization substance protein A 435 54.85 0 534715..537507 + 930 192360932 infB CJA_0436 - translation initiation factor IF-2 436 53.28 0 537609..538019 + 136 192359933 rbfA CJA_0437 - ribosome-binding factor A 437 58.33 +1 538019..538978 + 319 192361348 truB CJA_0438 - tRNA pseudouridine synthase B 438 51.85 0 539133..539402 + 89 192360136 rpsO CJA_0439 - ribosomal protein S15 439 53.16 0 539639..541771 + 710 192359049 - CJA_0440 - polyribonucleotide nucleotidyltransferase 440 49.20 0 541871..543439 - 522 192361912 - CJA_0441 - hypothetical protein 441 49.77 0 543529..544824 - 431 192361597 - CJA_0442 - AmpG protein, beta-lactamase induction signal transducer 442 51.50 0 545126..545659 - 177 192362399 ppa CJA_0443 - inorganic pyrophosphatase 443 54.67 0 545752..546576 - 274 192359357 - CJA_0444 - FHA domain protein 444 53.68 0 546664..547125 + 153 192360392 - CJA_0445 - Selenoprotein W-related family 445 50.29 0 547268..549862 + 864 192361734 - CJA_0446 - hypothetical protein 446 47.22 0 549917..551068 - 383 192359232 - CJA_0447 - ISCja2, transposase 447 52.70 0 551202..552218 - 338 192359972 - CJA_0448 - hypothetical protein 448 51.30 0 552226..552648 + 140 192360350 - CJA_0449 - hypothetical protein 449 54.22 0 552921..553997 - 358 192361148 axe2C CJA_0450 - xylan esterase, putative, axe2C 450 52.05 0 554068..554676 - 202 192361816 - CJA_0451 - mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase) 451 53.43 0 554941..555990 - 349 192360566 holA CJA_0452 - DNA polymerase III, delta subunit 452 50.09 0 555996..556532 - 178 192360006 - CJA_0453 - putative rare lipoprotein B precursor 453 54.49 0 556577..559171 - 864 192359451 leuS CJA_0454 - leucyl-tRNA synthetase 454 57.14 0 559325..559660 + 111 192361754 - CJA_0455 - hypothetical protein 455 56.38 0 559837..560769 + 310 192361132 - CJA_0456 - endo-1,4-beta-xylanase B 456 55.68 0 560863..563010 - 715 192360859 aquI CJA_0457 - aqualysin precursor 457 50.00 0 563502..563819 + 105 192361653 rplU CJA_0458 - ribosomal protein L21 458 52.33 0 563834..564091 + 85 192359608 rpmA CJA_0459 - ribosomal protein L27 459 52.72 0 564229..565425 + 398 192360477 - CJA_0460 - GTP1/OBG family 460 52.72 0 565447..566586 + 379 192360112 proB CJA_0461 - glutamate 5-kinase 461 47.12 0 566653..568611 - 652 192360996 - CJA_0462 - hypothetical protein 462 54.31 0 568838..570148 + 436 192360476 - CJA_0463 - putative lipoprotein 463 54.28 0 570173..570826 - 217 192359639 - CJA_0464 - HAD-superfamily subfamily IB hydrolase, TIGR01490 464 53.02 0 571035..571547 + 170 192361133 - CJA_0465 - hydrolase, NUDIX family 465 54.38 0 571587..573857 + 756 192359797 - CJA_0466 - phosphoenolpyruvate-protein phosphotransferase PtsP 466 52.03 0 573924..574784 + 286 192359062 lgt CJA_0467 - prolipoprotein diacylglyceryl transferase 467 49.59 0 574820..575668 + 282 192362015 thyA CJA_0468 - thymidylate synthase 468 52.52 0 575690..576205 + 171 192360867 folA CJA_0469 - dihydrofolate reductase 469 48.25 0 576442..576555 + 37 192361493 - CJA_0470 - hypothetical protein 470 46.05 -1 576563..577270 + 235 192360297 - CJA_0471 - hypothetical protein 471 49.82 0 577267..578649 + 460 192362143 - CJA_0472 - MotA/TolQ/ExbB proton channel family protein 472 49.43 0 578662..579189 + 175 192361298 - CJA_0473 - TonB system transport protein ExbB2 473 48.64 0 579234..579638 + 134 192360013 - CJA_0474 - TonB system transport protein ExbD2 474 47.78 0 579644..580273 + 209 192359183 - CJA_0475 - putative tonB2 protein 475 46.42 -1 580285..581667 + 460 192361018 - CJA_0476 - TPR domain protein 476 56.15 0 581824..583668 - 614 192359754 ilvD CJA_0477 - dihydroxy-acid dehydratase 477 53.85 0 583801..584268 - 155 192358922 - CJA_0478 - acetyltransferase, GNAT family 478 52.45 0 584265..585593 - 442 192361856 argA CJA_0479 - amino-acid N-acetyltransferase 479 55.76 0 585620..586774 - 384 192359436 argE CJA_0480 - acetylornithine deacetylase (ArgE) 480 55.84 0 586912..588186 - 424 192360268 - CJA_0481 - pho4 family protein 481 54.87 0 588212..588889 - 225 192361089 - CJA_0482 - conserved hypothetical protein TIGR00153 482 58.17 +1 589058..590857 + 599 192362172 - CJA_0483 - type IV pilus biogenesis protein 483 58.04 +1 590945..591628 + 227 192361793 - CJA_0484 - putative glutathione S-transferase 484 52.38 0 591691..591900 + 69 192361559 - CJA_0485 - twin arginine-targeting protein translocase, TatA/E family 485 56.45 0 592119..592676 - 185 192360218 - CJA_0486 - PEP-CTERM putative exosortase interaction domain protein 486 60.30 +1 592703..594100 - 465 192359402 - CJA_0487 - Tat (twin-arginine translocation) pathway signal sequence domain protein 487 53.31 0 594225..595040 - 271 192362003 - CJA_0488 - Sec-independent protein translocase TatC 488 60.61 +1 595045..595440 - 131 192359993 - CJA_0489 - TatB 489 55.71 0 595510..596376 - 288 192361530 - CJA_0490 - hypothetical protein 490 56.31 0 596606..597619 + 337 192361668 gal53A-1 CJA_0491 - arabinogalactan endo-1,4-beta-galactosidase, putative, gal53A 491 55.72 0 597653..598894 + 413 192362235 gal53B CJA_0492 - arabinogalactan endo-1,4-beta-galactosidase, putative, gal53B 492 41.94 -1 598910..599002 + 30 192361239 - CJA_0493 - hypothetical protein 493 49.99 0 599129..606433 + 2434 192360559 cbp35C CJA_0494 - carbohydrate binding protein, cbp35C 494 51.28 0 606961..607857 - 298 192359480 - CJA_0495 - hypothetical protein 495 54.65 0 608083..610437 - 784 192360653 bgl2A CJA_0496 - beta-galactosidase, putative, bgl2A 496 51.37 0 610492..611622 - 376 192360044 gal53A-2 CJA_0497 - Arabinogalactan endo-1,4-beta-galactosidase gal53A 497 56.03 0 611718..614444 - 908 192360944 - CJA_0498 - putative TonB-dependent receptor 498 42.86 -1 614495..614599 + 34 192360122 - CJA_0499 - hypothetical protein 499 59.72 +1 614655..617621 + 988 192359114 glnE CJA_0500 - glutamate-ammonia-ligase adenylyltransferase 500 57.10 0 617648..618577 + 309 192361791 ilvE CJA_0501 - branched-chain amino acid aminotransferase 501 61.05 +1 618658..619725 + 355 192360592 gt9A CJA_0502 - glycosyl transferase, putative, gt9A 502 60.28 +1 619746..620591 + 281 192359507 waaP CJA_0503 - lipopolysaccharide core biosynthesis protein WaaP 503 61.63 +1 620588..621718 + 376 192362277 gt4E CJA_0504 - glycosyl transferase, putative, gt4E 504 59.24 +1 621728..622912 + 394 192360153 - CJA_0505 - O-antigen polymerase family protein 505 58.49 +1 622897..624021 + 374 192361230 gt4D CJA_0506 - glycosyl transferase, putative, gt4D 506 47.50 0 624014..624133 + 39 192362334 - CJA_0507 - hypothetical protein 507 52.90 0 624123..625895 + 590 192359291 msbA CJA_0508 - lipid A export permease/ATP-binding protein MsbA 508 55.11 0 625951..627387 + 478 192362253 rfaE CJA_0509 - LPS biosynthesis protein RfaE 509 52.13 0 627350..627982 + 210 192361578 - CJA_0510 - methyl-accepting chemotaxis protein 52.09 MEAN 5.42 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0