version 1.0
Cellvibrio japonicus Ueda107, complete genome - 1..4576573 3754 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3259 55.31 0 3985109..3985786 - 225 192359446 gspH CJA_3328 - General secretion pathway protein H 3260 51.75 0 3985740..3986195 - 151 192360788 gspG CJA_3329 - General secretion pathway protein G 3261 56.23 0 3986232..3987467 - 411 192361623 gspF CJA_3330 - General secretion pathway protein F 3262 57.21 0 3987483..3989057 - 524 192360332 gspE CJA_3331 - General secretion pathway protein E 3263 53.91 0 3989061..3991106 - 681 192361327 gspD CJA_3332 - General secretion pathway protein D 3264 56.93 0 3991122..3992261 - 379 192360107 gspC CJA_3333 - General secretion pathway protein C 3265 57.03 0 3992776..3993024 + 82 192361149 xseB CJA_3334 - exodeoxyribonuclease VII, small subunit 3266 60.14 +1 3993021..3993908 + 295 192362196 ispA CJA_3335 - geranyltranstransferase 3267 58.71 +1 3994013..3995923 + 636 192359149 dxs CJA_3336 - 1-deoxy-D-xylulose-5-phosphate synthase 3268 54.57 0 3996014..3997831 - 605 192359998 cel5E CJA_3337 - cellulase, putative, cel5E 3269 56.23 0 3998478..3999770 + 430 192360830 man5A CJA_3338 - endo- 1,4-beta-mannanase man5A 3270 55.87 0 4000143..4001003 - 286 192360892 cae1C CJA_3339 - carbohydrate esterase, putative, cae1C 3271 57.39 0 4001019..4002128 - 369 192361685 adhC CJA_3340 - alcohol dehydrogenase C 3272 59.44 +1 4002279..4003178 + 299 192360613 - CJA_3341 - transcriptional regulator, LysR family 3273 52.92 0 4003211..4004425 - 404 192361474 nupG CJA_3342 - nucleoside-transport system protein 3274 59.06 +1 4004593..4005735 - 380 192361579 - CJA_3343 - Oxidoreductase family, NAD-binding Rossmann fold domain protein 3275 56.13 0 4005738..4006790 - 350 192358811 - CJA_3344 - AP endonuclease family 2 C terminus family 3276 51.65 0 4006972..4007670 - 232 192358826 - CJA_3345 - CAAX amino terminal protease family protein 3277 56.68 0 4007848..4008969 - 373 192359767 dnaJ CJA_3346 - chaperone protein DnaJ 3278 53.77 0 4009089..4011011 - 640 192361066 dnaK CJA_3347 - chaperone protein DnaK 3279 59.20 +1 4011189..4011764 - 191 192361899 grpE CJA_3348 - co-chaperone GrpE 3280 35.42 -2 4012030..4012125 + 31 192360441 - CJA_3349 - hypothetical protein 3281 56.67 0 4012225..4013844 + 539 192361242 - CJA_3350 - methyl-accepting chemotaxis protein 3282 60.31 +1 4013924..4015591 + 555 192358991 recN CJA_3351 - DNA repair protein RecN 3283 48.42 0 4015666..4016076 - 136 192359556 fur CJA_3352 - transcriptional regulator Fur 3284 51.41 0 4016107..4016604 + 165 192360954 - CJA_3353 - Outer membrane lipoprotein omlA precursor 3285 56.57 0 4016678..4018321 - 547 192359905 - CJA_3354 - GGDEF domain protein 3286 59.68 +1 4018524..4020941 + 805 192360118 - CJA_3355 - sensory box/GGDEF family protein 3287 54.38 0 4021047..4022267 + 406 192359047 - CJA_3357 - HD domain protein 3288 55.90 0 4022261..4022650 - 129 192361926 - CJA_3356 - response regulator 3289 53.19 0 4022647..4024932 - 761 192361097 - CJA_3358 - two-component hybrid sensor and regulator 3290 55.95 0 4025046..4029011 - 1321 192362033 - CJA_3359 - two-component hybrid sensor and regulator 3291 55.56 0 4029154..4029477 - 107 192360900 - CJA_3360 - Protein yfjF 3292 54.94 0 4029504..4029938 - 144 192360500 - CJA_3361 - hypothetical protein 3293 55.21 0 4030116..4030595 + 159 192358965 smpB CJA_3362 - SsrA-binding protein 3294 59.41 +1 4030596..4031642 - 348 192358959 - CJA_3363 - transcriptional regulator, LuxR family 3295 51.67 0 4031760..4031879 - 39 192361935 - CJA_3364 - hypothetical protein 3296 62.83 +1 4031925..4032680 + 251 192362327 - CJA_3365 - hydrolase, alpha/beta fold family 3297 48.39 0 4032758..4033873 + 371 192359800 - CJA_3366 - transcriptional regulator, LuxR family 3298 50.80 0 4034071..4035954 + 627 192359311 - CJA_3367 - putative lipoprotein 3299 56.21 0 4036024..4038279 + 751 192360235 - CJA_3368 - hypothetical protein 3300 54.89 0 4038351..4039445 - 364 192359406 cel5C CJA_3369 - cellulase, putative, cel5C 3301 61.02 +1 4039556..4043521 - 1321 192361873 - CJA_3370 - hypothetical protein 3302 56.24 0 4043485..4045230 - 581 192360745 - CJA_3371 - outer membrane protein, OMP85 family 3303 57.58 +1 4045370..4046227 + 285 192360807 - CJA_3372 - hypothetical protein 3304 60.77 +1 4046248..4046637 + 129 192360071 - CJA_3373 - hypothetical protein 3305 52.54 0 4046642..4046995 + 117 192359203 - CJA_3374 - hypothetical protein 3306 55.61 0 4047100..4049016 + 638 192362208 - CJA_3375 - sensory box/GGDEF family protein 3307 53.08 0 4049213..4049764 + 183 192361341 - CJA_3376 - hypothetical protein 3308 49.17 0 4049805..4050347 - 180 192360518 rnk CJA_3377 - regulator of nucleoside diphosphate kinase 3309 35.83 -2 4050506..4051627 - 373 192359689 - CJA_3378 - hypothetical protein 3310 52.49 0 4051663..4053045 - 460 192361708 - CJA_3379 - MATE efflux family protein subfamily 3311 53.71 0 4053079..4054344 - 421 192360847 - CJA_3380 - excitatory amino acid transporter 3312 52.94 0 4054347..4055009 - 220 192360036 - CJA_3381 - hypothetical protein 3313 60.26 +1 4055110..4057497 - 795 192360558 gt51B CJA_3382 - murein polymerase, putative, gt51B 3314 55.50 0 4057501..4058709 - 402 192359509 - CJA_3383 - hemY protein 3315 52.82 0 4058709..4059878 - 389 192358919 - CJA_3384 - putative uroporphyrinogen III methylase 3316 55.40 0 4059872..4060705 - 277 192361669 hemD CJA_3385 - uroporphyrinogen-III synthase 3317 59.49 +1 4060702..4061649 - 315 192360982 hemC CJA_3386 - porphobilinogen deaminase 3318 51.53 0 4061767..4063200 - 477 192359811 - CJA_3387 - high affinity choline transporter 3319 47.37 0 4063314..4063598 - 94 192358907 - CJA_3388 - hypothetical protein 3320 53.27 0 4063605..4063925 - 106 192362073 - CJA_3389 - PA5285-like protein 3321 50.15 0 4064326..4064664 - 112 192361217 - CJA_3390 - Nitrogen regulatory protein P-II 3322 51.14 0 4064847..4066115 - 422 192360328 - CJA_3391 - ammonium transporter 3323 53.39 0 4066147..4066485 - 112 192362245 - CJA_3392 - Nitrogen regulatory protein P-II 3324 52.14 0 4066894..4067127 + 77 192360696 - CJA_3393 - hypothetical protein 3325 59.79 +1 4067142..4068755 + 537 192359858 - CJA_3394 - Mg chelatase homolog 3326 56.70 0 4068757..4070472 - 571 192359035 - CJA_3395 - EAL domain protein 3327 56.12 0 4070690..4072708 + 672 192362002 rep CJA_3396 - ATP-dependent DNA helicase Rep 3328 57.14 0 4072809..4073249 - 146 192362206 - CJA_3397 - Cytochrome c5 3329 52.48 0 4073447..4075504 + 685 192361268 prsK CJA_3398 - putative PEP-CTERM system histidine kinase 3330 52.54 0 4075501..4076895 + 464 192359614 prsR CJA_3399 - putative PEP-CTERM system response regulator 3331 53.19 0 4076905..4077045 - 46 192360425 - CJA_3400 - hypothetical protein 3332 50.40 0 4077157..4077900 + 247 192361427 - CJA_3402 - putative lipoprotein 3333 53.15 0 4077240..4077350 - 36 192361763 - CJA_3401 - hypothetical protein 3334 52.23 0 4078218..4078958 + 246 192360814 - CJA_3403 - PEP-CTERM putative exosortase interaction domain protein 3335 47.68 0 4079167..4080546 + 459 192361630 - CJA_3404 - eight transmembrane protein EpsH (proposed exosortase) 3336 45.61 -1 4080557..4081696 + 379 192359179 gt2M CJA_3405 - glycosyl transferase, putative, gt2M 3337 46.96 0 4081708..4083057 + 449 192360068 cAPK CJA_3406 - capK related-protein 3338 46.99 0 4083045..4083959 + 304 192360721 gt2I CJA_3407 - glycosyl transferase, putative, gt2I 3339 47.96 0 4083960..4084964 + 334 192361787 pda4E CJA_3408 - polysaccharide deacetylase protein, putative, pda4E 3340 50.12 0 4085014..4086669 + 551 192359408 - CJA_3409 - hypothetical protein 3341 54.11 0 4086666..4087796 + 376 192360155 gt4B CJA_3410 - glycosyl transferase, putative, gt4B 3342 52.56 0 4087875..4088909 + 344 192361549 gt4A CJA_3411 - glycosyl transferase, putative, gt4A 3343 44.19 -1 4088906..4090195 + 429 192359666 - CJA_3412 - O-antigen polymerase family protein 3344 48.98 0 4090258..4091184 + 308 192361642 - CJA_3413 - glycosyl transferase, group 1 family protein domain protein 3345 46.83 0 4091305..4092378 + 357 192361039 - CJA_3414 - hypothetical protein 3346 35.34 -2 4092553..4093746 - 397 192359925 - CJA_3415 - hypothetical protein 3347 34.09 -2 4093736..4094656 - 306 192360326 gt2L CJA_3416 - glycosyl transferase, putative, gt2L 3348 34.38 -2 4094660..4096189 - 509 192362089 - CJA_3417 - polysaccharide biosynthesis family protein 3349 45.45 -1 4096186..4097208 - 340 192362475 - CJA_3418 - hypothetical protein 3350 46.27 -1 4097221..4099848 - 875 192361411 - CJA_3419 - TPR domain protein 3351 43.75 -1 4099892..4101187 - 431 192359903 - CJA_3420 - hypothetical protein 3352 50.88 0 4100129..4100242 + 37 192358905 - CJA_3421 - hypothetical protein 3353 46.64 -1 4101243..4102031 - 262 192360234 - CJA_3422 - putative polysaccharide biosynthesis protein 3354 46.84 0 4102041..4103558 - 505 192359383 - CJA_3423 - polysaccharide chain length determinant protein 3355 50.84 0 4103621..4104214 - 197 192360918 - CJA_3424 - Polysaccharide biosynthesis/export protein 3356 50.14 0 4104275..4105654 - 459 192360082 lthA CJA_3425 - Bacterial sugar transferase 3357 50.04 0 4105904..4107178 + 424 192359672 - CJA_3426 - polysaccharide biosynthesis protein 3358 49.70 0 4107197..4108204 + 335 192361703 - CJA_3427 - NAD dependent epimerase/dehydratase family superfamily 52.09 MEAN 5.42 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0