version 1.0
Cellvibrio japonicus Ueda107, complete genome - 1..4576573 3754 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3135 55.60 0 3822133..3822900 - 255 192361618 - CJA_3204 - YfiH 3136 57.11 0 3822906..3823868 - 320 192360779 - CJA_3205 - pseudouridine synthase, RluA family subfamily 3137 53.96 0 3823947..3824930 + 327 192359694 - CJA_3206 - competence protein ComL 3138 54.25 0 3824981..3826663 - 560 192362224 adgA CJA_3207 - glutamine-dependent NAD+ synthetase signal peptide protein 3139 48.29 0 3826810..3828480 + 556 192361351 pilS CJA_3208 - sensor kinase 3140 47.65 0 3828504..3829907 + 467 192360048 pilR CJA_3209 - PilR 3141 41.44 -1 3830044..3830475 - 143 192359209 - CJA_3210 - type IV pilin 3142 43.16 -1 3830476..3834924 - 1482 192361698 - CJA_3211 - putative fimbrial protein 3143 41.81 -1 3835546..3836595 - 349 192359215 pilW CJA_3212 - type 4 fimbrial biogenesis protein PilW 3144 45.95 -1 3837836..3838366 + 176 192361695 fimT CJA_3213 - pre-pilin like leader sequence 3145 54.29 0 3838370..3839314 - 314 192360516 ispH CJA_3214 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3146 49.68 0 3839317..3839781 - 154 192361591 - CJA_3215 - peptidyl-prolyl cis-trans isomerase, FKBP-type 3147 50.68 0 3839759..3840271 - 170 192362161 lspA CJA_3216 - signal peptidase II 3148 53.31 0 3840282..3843089 - 935 192359410 ileS CJA_3217 - isoleucyl-tRNA synthetase 3149 56.23 0 3843086..3844120 - 344 192359046 ribF CJA_3218 - riboflavin biosynthesis protein RibF 3150 58.63 +1 3844192..3845796 - 534 192361843 mviN CJA_3219 - integral membrane protein MviN 3151 48.89 0 3845821..3846270 + 149 192359342 - CJA_3220 - hypothetical protein 3152 47.39 0 3846669..3847550 + 293 192360583 - CJA_3221 - hypothetical protein 3153 54.30 0 3847577..3848215 - 212 192361223 - CJA_3222 - hypothetical protein 3154 55.37 0 3848253..3850208 - 651 192360975 - CJA_3223 - Phytanoyl-CoA dioxygenase (PhyH) family 3155 52.08 0 3850352..3851626 + 424 192360679 - CJA_3224 - Glycerophosphoryl diester phosphodiesterase family 3156 56.84 0 3851760..3852410 + 216 192360715 - CJA_3225 - probable transcriptional regulator arsR family 3157 52.58 0 3852464..3853819 + 451 192360141 qxtA CJA_3226 - quinol oxidase, subunit I 3158 51.86 0 3853829..3854848 + 339 192359078 - CJA_3227 - cytochrome oxidase subunit II superfamily 3159 45.14 -1 3854886..3855461 - 191 192362296 - CJA_3228 - hypothetical protein 3160 52.47 0 3856502..3856966 - 154 192361861 - CJA_3229 - hypothetical protein 3161 44.79 -1 3857044..3857139 - 31 192359166 - CJA_3230 - hypothetical protein 3162 54.90 0 3857323..3857424 + 33 192362374 - CJA_3232 - hypothetical protein 3163 57.60 +1 3857409..3858731 - 440 192360230 - CJA_3231 - PepSY-associated TM helix family 3164 54.82 0 3858811..3861072 - 753 192362325 - CJA_3233 - TonB-dependent receptor protein 3165 58.71 +1 3861238..3862644 - 468 192359708 - CJA_3234 - transporter, solute:sodium symporter (SSS) family 3166 57.44 0 3862665..3862859 - 64 192358968 - CJA_3235 - hypothetical protein 3167 51.26 0 3862959..3863354 - 131 192362373 ectC CJA_3236 - Ectoine synthase 3168 53.32 0 3863373..3864653 - 426 192361123 ectB CJA_3237 - diaminobutyrate--2-oxoglutarate aminotransferase 3169 54.83 0 3864783..3865382 - 199 192359769 - CJA_3238 - L-2,4-diaminobutyric acid acetyltransferase 3170 29.76 -2 3865409..3865576 + 55 192362078 - CJA_3239 - hypothetical protein 3171 60.56 +1 3865625..3866164 + 179 192360984 - CJA_3240 - transcriptional regulator, MarR family 3172 37.32 -2 3866892..3867317 - 141 192359475 - CJA_3241 - hypothetical protein 3173 47.22 0 3867404..3868555 - 383 192358862 - CJA_3242 - ISCja2, transposase 3174 45.87 -1 3868712..3871384 - 890 192362217 - CJA_3243 - mannosidase-like protein 3175 45.80 -1 3871436..3874588 - 1050 192360308 - CJA_3244 - TonB-dependent receptor 3176 50.71 0 3874667..3874948 - 93 192359830 - CJA_3245 - hypothetical protein 3177 53.60 0 3875307..3878306 - 999 192358814 - CJA_3246 - TonB-dependent receptor 3178 50.80 0 3878851..3881466 - 871 192361983 amy13H CJA_3247 - alpha-amylase, putative, amy13H 3179 50.96 0 3881837..3884287 + 816 192360939 agd31B CJA_3248 - alpha-glucosidase, putative, adg31B 3180 48.00 0 3884395..3886092 - 565 192362173 cgl13A CJA_3249 - cyclomaltodextrin glucanotransferase, putative, cgt13A 3181 48.67 0 3886169..3887368 - 399 192360958 - CJA_3250 - 3-dehydroquinate synthase 3182 48.15 0 3887375..3888076 - 233 192360533 - CJA_3251 - Phytanoyl-CoA dioxygenase (PhyH) superfamily 3183 47.16 0 3888109..3889359 - 416 192359269 pbg4A CJA_3252 - 6-phospho-beta-glucosidase, putative, pbg4A 3184 51.01 0 3889352..3890341 - 329 192358866 - CJA_3253 - putative glucokinase 3185 45.42 -1 3890354..3891412 - 352 192362031 glgC CJA_3254 - Glucose-1-phosphate adenylyltransferase 3186 50.44 0 3891425..3893248 - 607 192361968 gt5B CJA_3255 - glycosyl transferase, putative, gt5B 3187 49.48 0 3893386..3894933 - 515 192361398 - CJA_3256 - hypothetical protein 3188 54.73 0 3894930..3896228 - 432 192360256 - CJA_3257 - homolog of 4-aminobutyrate aminotransferase GabT 3189 51.05 0 3896225..3896557 - 110 192359434 - CJA_3258 - hypothetical protein 3190 50.56 0 3896581..3897114 - 177 192360053 - CJA_3259 - hypothetical protein 3191 50.06 0 3897206..3898903 - 565 192360355 - CJA_3260 - ABC transporter, ATP-binding protein 3192 50.44 0 3898900..3900711 - 603 192361756 - CJA_3261 - ABC transporter domain protein 3193 50.64 0 3900708..3901649 - 313 192360675 - CJA_3262 - kinase, pfkB family 3194 49.94 0 3902006..3904636 + 876 192361489 cgt13B CJA_3263 - cyclomaltodextrin glucanotransferase, putative, cgt13B 3195 52.46 0 3904707..3905255 - 182 192360876 - CJA_3264 - putative glutathione peroxidase 3196 52.66 0 3905373..3906536 - 387 192359816 - CJA_3265 - hypothetical protein 3197 55.56 0 3906523..3906747 - 74 192359660 - CJA_3266 - putative lipoprotein 3198 56.71 0 3906744..3907235 - 163 192362411 - CJA_3267 - putative thiol:disulfide interchange protein DsbE 3199 53.59 0 3907134..3907286 + 50 192359443 - CJA_3268 - hypothetical protein 3200 52.16 0 3907306..3907953 - 215 192360319 - CJA_3269 - hypothetical protein 3201 59.03 +1 3907908..3908666 + 252 192362389 - CJA_3271 - hypothetical protein 3202 59.16 +1 3907923..3908708 - 261 192359456 - CJA_3270 - hypothetical protein 3203 60.20 +1 3908731..3911622 - 963 192361517 - CJA_3272 - hypothetical protein 3204 48.68 0 3912340..3912567 - 75 192359928 - CJA_3273 - hypothetical protein 3205 60.43 +1 3912775..3914040 + 421 192361326 - CJA_3274 - hypothetical protein 3206 61.68 +1 3914042..3916570 + 842 192361721 - CJA_3275 - putative lipoprotein 3207 59.75 +1 3916591..3918180 + 529 192358808 - CJA_3276 - hypothetical protein 3208 52.55 0 3918318..3919061 + 247 192359577 - CJA_3277 - hypothetical protein 3209 45.32 -1 3919292..3920542 + 416 192360887 - CJA_3278 - transcriptional regulator, AraC family domain protein 3210 50.64 0 3920850..3922502 + 550 192359338 xyn5A CJA_3279 - endo-1,4-beta-xylanase, putative, xyn5A 3211 53.11 0 3922705..3924504 + 599 192360656 xyn10B CJA_3280 - endo-1,4-beta-xylanase, xyn10B 3212 53.23 0 3924630..3926489 + 619 192361477 abf62A CJA_3281 - alpha-L-arabinofuranosidase, abf62A 3213 55.15 0 3926638..3928365 + 575 192361809 fee1B CJA_3282 - ferruloyl esterase, putative, fee1B 3214 45.24 -1 3928444..3928611 + 55 192358891 - CJA_3283 - hypothetical protein 3215 42.14 -1 3928767..3929936 + 389 192359220 - CJA_3284 - transcriptional regulator, AraC family 3216 49.55 0 3930177..3930287 + 36 192359489 - CJA_3285 - hypothetical protein 3217 51.29 0 3930449..3933499 + 1016 192360834 ebg98 CJA_3286 - endo-beta-galactosidase, putative, ebg98A 3218 53.34 0 3933588..3935336 + 582 192361373 fee1A CJA_3287 - ferruloyl esterase, fee1A 3219 55.20 0 3935460..3936401 - 313 192362212 xerC CJA_3288 - tyrosine recombinase XerC 3220 57.33 0 3936423..3937118 - 231 192359180 - CJA_3289 - hypothetical protein 3221 58.48 +1 3937129..3937959 - 276 192360012 dapF CJA_3290 - diaminopimelate epimerase 3222 57.13 0 3937979..3939226 - 415 192360548 lysA CJA_3291 - diaminopimelate decarboxylase 3223 57.58 +1 3939271..3939468 - 65 192361617 - CJA_3292 - hypothetical protein 3224 56.27 0 3939508..3940728 - 406 192362267 - CJA_3293 - Sigma-54 interaction domain protein 3225 55.40 0 3940844..3941917 + 357 192361386 - CJA_3294 - FHA domain protein 3226 50.58 0 3941914..3944592 + 892 192360667 - CJA_3295 - putative serine/threonine protein kinase 3227 48.24 0 3944628..3945137 - 169 192362433 - CJA_3296 - hypothetical protein 3228 48.15 0 3945166..3945327 + 53 192359040 - CJA_3297 - hypothetical protein 3229 52.98 0 3945339..3947567 - 742 192359832 - CJA_3298 - putative TonB-dependent receptor 3230 46.82 0 3947578..3948756 - 392 192359999 - CJA_3299 - putative transcriptional regulator 3231 56.55 0 3948944..3949111 + 55 192361040 cbp6C CJA_3300 - carbohydrate binding protein, putative, cbp6C 3232 50.57 0 3949182..3949355 - 57 192359419 - CJA_3301 - hypothetical protein 3233 55.56 0 3949352..3949486 - 44 192360462 - CJA_3302 - hypothetical protein 3234 55.87 0 3949483..3949797 - 104 192359913 - CJA_3303 - hypothetical protein 52.09 MEAN 5.42 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0