version 1.0
Cellvibrio japonicus Ueda107, complete genome - 1..4576573 3754 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2994 54.59 0 3636343..3637203 + 286 192358846 nuhA CJA_3063 - Nudix hydrolase 2995 54.76 0 3637320..3638873 + 517 192360007 xylE CJA_3064 - MFS transporter 2996 52.80 0 3639042..3639380 - 112 192359899 - CJA_3065 - hypothetical protein 2997 52.00 0 3639064..3640884 + 606 192360972 xyn10C CJA_3066 - endo-beta-1,4-xylanase, xyn10C 2998 55.24 0 3640913..3642619 + 568 192361726 gly43J CJA_3067 - beta-xylosidase/alpha-L-arabinfuranosidase, putative, gly43J 2999 54.49 0 3642600..3645548 + 982 192361118 - CJA_3068 - hypothetical protein 3000 53.43 0 3645577..3646785 + 402 192362413 rspA CJA_3069 - Starvation sensing protein rspA 3001 51.42 0 3646845..3647972 + 375 192358849 gly43G CJA_3070 - beta-xylosidase/alpha-L-arabinfuranosidase, putative, gly43G 3002 49.23 0 3648182..3648766 + 194 192360928 - CJA_3071 - putative module of glucan-glucohydrolase 3003 42.04 -1 3648886..3652353 - 1155 192362075 - CJA_3072 - TonB-dependent receptor 3004 52.47 0 3652659..3653996 - 445 192359362 purA CJA_3073 - adenylosuccinate synthetase 3005 54.58 0 3654004..3655194 - 396 192358954 hisZ CJA_3074 - ATP phosphoribosyltransferase, regulatory subunit 3006 53.25 0 3655200..3655445 - 81 192360416 - CJA_3075 - hypothetical protein 3007 50.80 0 3655548..3656423 - 291 192360991 hflC CJA_3076 - HflC protein 3008 54.76 0 3656423..3657556 - 377 192360411 hflK CJA_3077 - HflK protein 3009 53.74 0 3657584..3658921 - 445 192361241 - CJA_3078 - hypothetical protein 3010 47.57 0 3658955..3659221 - 88 192362520 hfq CJA_3079 - Hfq protein 3011 54.18 0 3659344..3660360 - 338 192358868 miaA CJA_3080 - tRNA delta(2)-isopentenylpyrophosphate transferase 3012 57.10 0 3660364..3662244 - 626 192359923 mutL CJA_3081 - DNA mismatch repair protein MutL 3013 57.16 0 3662241..3663629 - 462 192360903 - CJA_3082 - N-acetylmuramoyl-L-alanine amidase 3014 43.65 -1 3663720..3663845 - 41 192361996 - CJA_3083 - hypothetical protein 3015 43.39 -1 3663914..3664102 - 62 192362219 - CJA_3084 - hypothetical protein 3016 57.14 0 3664107..3666320 - 737 192361865 - CJA_3085 - putative sensory box protein 3017 60.62 +1 3666515..3666994 - 159 192360576 - CJA_3086 - conserved hypothetical protein TIGR00150 3018 65.81 +2 3667004..3668518 - 504 192359898 - CJA_3087 - YjeF family protein 3019 58.56 +1 3668594..3670321 + 575 192359187 - CJA_3088 - hypothetical protein 3020 51.42 0 3670318..3670704 + 128 192361910 - CJA_3089 - hypothetical protein 3021 43.75 -1 3670667..3670762 + 31 192359012 - CJA_3091 - hypothetical protein 3022 50.34 0 3670755..3671483 - 242 192362264 - CJA_3090 - hypothetical protein 3023 48.65 0 3671583..3672359 - 258 192362335 - CJA_3092 - hypothetical protein 3024 53.62 0 3672568..3673755 + 395 192361608 - CJA_3093 - iron-sulfur cluster-binding protein 3025 52.18 0 3673897..3675435 + 512 192362384 - CJA_3094 - hypothetical protein 3026 56.61 0 3675466..3675972 + 168 192361160 - CJA_3095 - hypothetical protein 3027 61.09 +1 3675983..3677971 + 662 192360342 - CJA_3096 - hypothetical protein 3028 42.91 -1 3678805..3679671 + 288 192360426 - CJA_3097 - hypothetical protein 3029 61.40 +1 3679777..3680592 + 271 192361976 - CJA_3098 - dehydrogenase subunit 3030 56.49 0 3680891..3682345 + 484 192361140 gnd CJA_3099 - 6-phosphogluconate dehydrogenase, decarboxylating 3031 54.48 0 3683697..3684377 + 226 192359772 - CJA_3100 - hypothetical protein 3032 54.87 0 3684415..3686160 + 581 192359001 - CJA_3101 - oxidoreductase, GMC family 3033 53.77 0 3686196..3687071 + 291 192362496 - CJA_3102 - hypothetical protein 3034 50.69 0 3687114..3688196 + 360 192361479 ce2C CJA_3103 - acetyl xylan esterase, putative, axe2A 3035 55.79 0 3688296..3690245 - 649 192361673 pel10A CJA_3104 - pectate lyase, pel10A 3036 39.58 -2 3690798..3690893 - 31 192360866 - CJA_3105 - hypothetical protein 3037 56.49 0 3691018..3693474 + 818 192359995 cbp2B CJA_3106 - carbohydrate binding protein, putative, cbp2B 3038 54.42 0 3693620..3695929 + 769 192359051 cbp2C CJA_3107 - carbohydrate binding protein, putative, cbp2C 3039 52.41 0 3696043..3697059 - 338 192361803 - CJA_3108 - lipase family protein 3040 44.96 -1 3697043..3697171 - 42 192360720 - CJA_3109 - hypothetical protein 3041 57.45 0 3697261..3698139 + 292 192360512 - CJA_3110 - beta-lactamase 3042 42.42 -1 3698280..3698444 - 54 192359494 - CJA_3111 - hypothetical protein 3043 46.02 -1 3698344..3699336 + 330 192362222 - CJA_3112 - putative dipeptidyl peptidase IV 3044 56.11 0 3699347..3699649 - 100 192361514 - CJA_3113 - hypothetical protein 3045 52.52 0 3699751..3700068 - 105 192360124 - CJA_3114 - hypothetical protein 3046 57.60 +1 3700121..3701113 - 330 192359052 - CJA_3115 - putative lipoprotein 3047 56.31 0 3701180..3701401 - 73 192359592 pme8B CJA_3116 - pectin methylesterase putative, pme8B 3048 55.56 0 3701677..3702234 - 185 192360800 orn CJA_3117 - oligoribonuclease 3049 59.46 +1 3702330..3703370 + 346 192361423 - CJA_3118 - GTPase, YjeQ family 3050 55.60 0 3703401..3704213 + 270 192360611 rhdA CJA_3119 - rhodanese 3051 53.12 0 3704298..3706496 - 732 192359341 pel1G CJA_3120 - pectate lyase, putative, pel1G 3052 35.40 -2 3706713..3707777 - 354 192362319 - CJA_3121 - hypothetical protein 3053 34.30 -2 3707761..3708069 - 102 192361032 - CJA_3122 - hypothetical protein 3054 57.70 +1 3708978..3710081 + 367 192359421 - CJA_3123 - hypothetical protein 3055 60.61 +1 3710044..3710670 + 208 192361855 - CJA_3124 - hypothetical protein 3056 58.90 +1 3710704..3711501 + 265 192361054 acm73A CJA_3125 - endo-beta-N-acetylglucosaminidase, putative, acm73A 3057 56.89 0 3711848..3713668 + 606 192360380 amy13I CJA_3126 - alpha-amylase, putative, amy13I 3058 55.23 0 3713767..3714876 - 369 192360938 pda4D CJA_3127 - polysaccharide deacetylase, putative, pda4D 3059 56.27 0 3714952..3718317 - 1121 192362007 - CJA_3128 - hypothetical protein 3060 59.88 +1 3717704..3717865 + 53 192358780 - CJA_3129 - hypothetical protein 3061 62.71 +1 3717768..3717944 + 58 192360680 - CJA_3130 - hypothetical protein 3062 57.41 0 3718406..3718675 - 89 192361767 - CJA_3131 - hypothetical protein 3063 57.19 0 3718781..3721039 - 752 192362361 parC CJA_3132 - DNA topoisomerase IV, A subunit 3064 55.69 0 3721112..3721612 - 166 192359558 - CJA_3133 - putative lipoprotein 3065 57.21 0 3721680..3722081 + 133 192361491 - CJA_3135 - hypothetical protein 3066 56.08 0 3722078..3722455 - 125 192362102 - CJA_3134 - hypothetical protein 3067 61.32 +1 3722505..3723233 - 242 192362005 - CJA_3136 - hypothetical protein 3068 59.88 +1 3723226..3723873 - 215 192358886 glob1 CJA_3137 - metallo-beta-lactamase superfamily protein 3069 58.22 +1 3723931..3724581 - 216 192360323 - CJA_3138 - hypothetical protein 3070 54.54 0 3724666..3725679 - 337 192360917 cbp33/10B CJA_3139 - chitin binding protein, putative, cbp33/10B 3071 54.65 0 3726695..3727543 + 282 192359308 psd CJA_3140 - phosphatidylserine decarboxylase 3072 50.53 0 3727613..3728368 - 251 192360394 - CJA_3141 - Integral membrane protein TerC family superfamily 3073 46.67 -1 3728381..3728500 - 39 192359876 - CJA_3142 - hypothetical protein 3074 54.17 0 3728525..3729892 - 455 192362497 - CJA_3143 - HD domain protein 3075 58.92 +1 3730103..3731173 - 356 192360733 hemE CJA_3144 - uroporphyrinogen decarboxylase 3076 56.76 0 3731268..3732851 - 527 192361840 - CJA_3145 - Na/Pi cotransporter family protein 3077 55.37 0 3732904..3734319 - 471 192362482 gltD CJA_3146 - glutamate synthase, small subunit 3078 57.58 +1 3734342..3738796 - 1484 192361435 - CJA_3147 - glutamate synthase large chain precursor 3079 57.30 0 3739053..3739511 - 152 192359831 - CJA_3148 - putative lipoprotein 3080 60.12 +1 3739640..3740770 + 376 192358791 - CJA_3149 - hypothetical protein 3081 55.16 0 3740776..3742287 - 503 192360965 - CJA_3150 - tryptophan halogenase 3082 58.28 +1 3742312..3743253 - 313 192359878 - CJA_3151 - transcriptional regulator, LysR family 3083 58.35 +1 3743474..3744784 + 436 192360400 - CJA_3152 - cation:proton antiporter 3084 50.90 0 3744738..3745853 + 371 192359356 - CJA_3153 - PEP-CTERM putative exosortase interaction domain protein 3085 59.86 +1 3745957..3746103 - 48 192358828 - CJA_3154 - hypothetical protein 3086 55.38 0 3746242..3747012 + 256 192360752 - CJA_3155 - hypothetical protein 3087 51.63 0 3747043..3748545 + 500 192362047 gt39A CJA_3156 - glycosyl transferase, putative, gt39A 3088 51.61 0 3748548..3749105 + 185 192359296 - CJA_3157 - putative serine protease 3089 51.20 0 3749171..3749797 - 208 192360339 - CJA_3158 - hypothetical protein 3090 58.75 +1 3749844..3751901 - 685 192362247 - CJA_3159 - thiol-disulfide interchange protein DsbD homolog 3091 45.07 -1 3752066..3755056 - 996 192361885 - CJA_3160 - tonB dependent receptor-related protein 3092 47.27 0 3755132..3759652 - 1506 192358848 pul13B CJA_3161 - pullulanase, putative, pul13B 3093 50.66 0 3760104..3761384 - 426 192359893 - CJA_3162 - hypothetical protein 52.09 MEAN 5.42 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0