version 1.0
Cellvibrio japonicus Ueda107, complete genome - 1..4576573 3754 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2955 60.96 +1 3582218..3583462 + 414 192361163 - CJA_3024 - RNA polymerase sigma factor, sigma-70 family 2956 53.74 0 3583464..3583811 - 115 192359159 - CJA_3025 - hypothetical protein 2957 53.72 0 3584065..3584427 + 120 192360115 - CJA_3026 - hypothetical protein 2958 49.39 0 3584479..3584889 + 136 192360730 - CJA_3027 - hypothetical protein 2959 54.26 0 3584921..3585307 + 128 192359252 - CJA_3028 - DGPF domain superfamily 2960 51.83 0 3585279..3585797 + 172 192362516 - CJA_3029 - transcriptional regulatory protein 2961 50.86 0 3585856..3588063 - 735 192360015 - CJA_3030 - hypothetical protein 2962 57.79 +1 3588189..3590429 - 746 192359326 - CJA_3031 - cell wall degradation protein 2963 54.95 0 3590466..3591233 + 255 192361645 - CJA_3032 - hypothetical protein 2964 49.41 0 3591530..3593059 - 509 192361048 - CJA_3033 - Peptidase family S41B family 2965 51.07 0 3594429..3603770 - 3113 192360205 - CJA_3034 - hypothetical protein 2966 43.86 -1 3594517..3594630 + 37 192359112 - CJA_3035 - hypothetical protein 2967 54.87 0 3603508..3603702 + 64 192361300 - CJA_3037 - hypothetical protein 2968 49.84 0 3603692..3604636 - 314 192362367 - CJA_3036 - hypothetical protein 2969 54.06 0 3604695..3606701 - 668 192362463 - CJA_3038 - putative AAA family ATPase 2970 53.82 0 3606698..3608449 - 583 192361170 - CJA_3039 - hypothetical protein 2971 57.57 +1 3608463..3612464 - 1333 192360393 - CJA_3040 - hypothetical protein 2972 62.83 +1 3612555..3614276 - 573 192360026 - CJA_3041 - hypothetical protein 2973 64.40 +2 3614315..3615241 - 308 192361934 - CJA_3042 - hypothetical protein 2974 63.93 +2 3615270..3617756 - 828 192360695 - CJA_3043 - hypothetical protein 2975 63.38 +2 3617769..3619931 - 720 192359888 - CJA_3044 - hypothetical protein 2976 60.49 +1 3619959..3620363 - 134 192358799 - CJA_3045 - hypothetical protein 2977 59.42 +1 3620369..3622078 - 569 192361842 - CJA_3046 - hypothetical protein 2978 61.97 +1 3622078..3622737 - 219 192360310 - CJA_3047 - hypothetical protein 2979 59.60 +1 3622725..3623771 - 348 192360195 - CJA_3048 - hypothetical protein 2980 53.57 0 3623781..3623948 - 55 192361019 - CJA_3049 - hypothetical protein 2981 56.84 0 3623969..3625036 - 355 192361886 - CJA_3050 - hypothetical protein 2982 56.26 0 3625140..3625610 - 156 192359889 - CJA_3051 - conserved hypothetical phage tail region protein subfamily 2983 59.20 +1 3625603..3627168 - 521 192360874 - CJA_3052 - hypothetical protein 2984 53.03 0 3627207..3627668 - 153 192361672 - CJA_3053 - conserved hypothetical phage tail region protein subfamily 2985 58.08 +1 3627712..3629295 - 527 192362398 - CJA_3054 - Phage tail sheath protein 2986 57.23 0 3629338..3630153 - 271 192361577 - CJA_3055 - hypothetical protein 2987 55.45 0 3630203..3630817 - 204 192362141 - CJA_3056 - hypothetical protein 2988 56.88 0 3630821..3631147 - 108 192359073 - CJA_3057 - hypothetical protein 2989 49.49 0 3631154..3631252 - 32 192361634 - CJA_3058 - hypothetical protein 2990 46.76 0 3631300..3631515 - 71 192359297 - CJA_3059 - hypothetical protein 2991 52.08 0 3631675..3633162 + 495 192360302 mopR CJA_3060 - MopR 2992 53.00 0 3633292..3634623 - 443 192360940 xylA CJA_3061 - xylose isomerase 2993 55.20 0 3634666..3636147 - 493 192362034 - CJA_3062 - xylulose kinase (xylulokinase) 2994 54.59 0 3636343..3637203 + 286 192358846 nuhA CJA_3063 - Nudix hydrolase 2995 54.76 0 3637320..3638873 + 517 192360007 xylE CJA_3064 - MFS transporter 2996 52.80 0 3639042..3639380 - 112 192359899 - CJA_3065 - hypothetical protein 2997 52.00 0 3639064..3640884 + 606 192360972 xyn10C CJA_3066 - endo-beta-1,4-xylanase, xyn10C 2998 55.24 0 3640913..3642619 + 568 192361726 gly43J CJA_3067 - beta-xylosidase/alpha-L-arabinfuranosidase, putative, gly43J 2999 54.49 0 3642600..3645548 + 982 192361118 - CJA_3068 - hypothetical protein 3000 53.43 0 3645577..3646785 + 402 192362413 rspA CJA_3069 - Starvation sensing protein rspA 3001 51.42 0 3646845..3647972 + 375 192358849 gly43G CJA_3070 - beta-xylosidase/alpha-L-arabinfuranosidase, putative, gly43G 3002 49.23 0 3648182..3648766 + 194 192360928 - CJA_3071 - putative module of glucan-glucohydrolase 3003 42.04 -1 3648886..3652353 - 1155 192362075 - CJA_3072 - TonB-dependent receptor 3004 52.47 0 3652659..3653996 - 445 192359362 purA CJA_3073 - adenylosuccinate synthetase 3005 54.58 0 3654004..3655194 - 396 192358954 hisZ CJA_3074 - ATP phosphoribosyltransferase, regulatory subunit 3006 53.25 0 3655200..3655445 - 81 192360416 - CJA_3075 - hypothetical protein 3007 50.80 0 3655548..3656423 - 291 192360991 hflC CJA_3076 - HflC protein 3008 54.76 0 3656423..3657556 - 377 192360411 hflK CJA_3077 - HflK protein 3009 53.74 0 3657584..3658921 - 445 192361241 - CJA_3078 - hypothetical protein 3010 47.57 0 3658955..3659221 - 88 192362520 hfq CJA_3079 - Hfq protein 3011 54.18 0 3659344..3660360 - 338 192358868 miaA CJA_3080 - tRNA delta(2)-isopentenylpyrophosphate transferase 3012 57.10 0 3660364..3662244 - 626 192359923 mutL CJA_3081 - DNA mismatch repair protein MutL 3013 57.16 0 3662241..3663629 - 462 192360903 - CJA_3082 - N-acetylmuramoyl-L-alanine amidase 3014 43.65 -1 3663720..3663845 - 41 192361996 - CJA_3083 - hypothetical protein 3015 43.39 -1 3663914..3664102 - 62 192362219 - CJA_3084 - hypothetical protein 3016 57.14 0 3664107..3666320 - 737 192361865 - CJA_3085 - putative sensory box protein 3017 60.62 +1 3666515..3666994 - 159 192360576 - CJA_3086 - conserved hypothetical protein TIGR00150 3018 65.81 +2 3667004..3668518 - 504 192359898 - CJA_3087 - YjeF family protein 3019 58.56 +1 3668594..3670321 + 575 192359187 - CJA_3088 - hypothetical protein 3020 51.42 0 3670318..3670704 + 128 192361910 - CJA_3089 - hypothetical protein 3021 43.75 -1 3670667..3670762 + 31 192359012 - CJA_3091 - hypothetical protein 3022 50.34 0 3670755..3671483 - 242 192362264 - CJA_3090 - hypothetical protein 3023 48.65 0 3671583..3672359 - 258 192362335 - CJA_3092 - hypothetical protein 3024 53.62 0 3672568..3673755 + 395 192361608 - CJA_3093 - iron-sulfur cluster-binding protein 3025 52.18 0 3673897..3675435 + 512 192362384 - CJA_3094 - hypothetical protein 3026 56.61 0 3675466..3675972 + 168 192361160 - CJA_3095 - hypothetical protein 3027 61.09 +1 3675983..3677971 + 662 192360342 - CJA_3096 - hypothetical protein 3028 42.91 -1 3678805..3679671 + 288 192360426 - CJA_3097 - hypothetical protein 3029 61.40 +1 3679777..3680592 + 271 192361976 - CJA_3098 - dehydrogenase subunit 3030 56.49 0 3680891..3682345 + 484 192361140 gnd CJA_3099 - 6-phosphogluconate dehydrogenase, decarboxylating 3031 54.48 0 3683697..3684377 + 226 192359772 - CJA_3100 - hypothetical protein 3032 54.87 0 3684415..3686160 + 581 192359001 - CJA_3101 - oxidoreductase, GMC family 3033 53.77 0 3686196..3687071 + 291 192362496 - CJA_3102 - hypothetical protein 3034 50.69 0 3687114..3688196 + 360 192361479 ce2C CJA_3103 - acetyl xylan esterase, putative, axe2A 3035 55.79 0 3688296..3690245 - 649 192361673 pel10A CJA_3104 - pectate lyase, pel10A 3036 39.58 -2 3690798..3690893 - 31 192360866 - CJA_3105 - hypothetical protein 3037 56.49 0 3691018..3693474 + 818 192359995 cbp2B CJA_3106 - carbohydrate binding protein, putative, cbp2B 3038 54.42 0 3693620..3695929 + 769 192359051 cbp2C CJA_3107 - carbohydrate binding protein, putative, cbp2C 3039 52.41 0 3696043..3697059 - 338 192361803 - CJA_3108 - lipase family protein 3040 44.96 -1 3697043..3697171 - 42 192360720 - CJA_3109 - hypothetical protein 3041 57.45 0 3697261..3698139 + 292 192360512 - CJA_3110 - beta-lactamase 3042 42.42 -1 3698280..3698444 - 54 192359494 - CJA_3111 - hypothetical protein 3043 46.02 -1 3698344..3699336 + 330 192362222 - CJA_3112 - putative dipeptidyl peptidase IV 3044 56.11 0 3699347..3699649 - 100 192361514 - CJA_3113 - hypothetical protein 3045 52.52 0 3699751..3700068 - 105 192360124 - CJA_3114 - hypothetical protein 3046 57.60 +1 3700121..3701113 - 330 192359052 - CJA_3115 - putative lipoprotein 3047 56.31 0 3701180..3701401 - 73 192359592 pme8B CJA_3116 - pectin methylesterase putative, pme8B 3048 55.56 0 3701677..3702234 - 185 192360800 orn CJA_3117 - oligoribonuclease 3049 59.46 +1 3702330..3703370 + 346 192361423 - CJA_3118 - GTPase, YjeQ family 3050 55.60 0 3703401..3704213 + 270 192360611 rhdA CJA_3119 - rhodanese 3051 53.12 0 3704298..3706496 - 732 192359341 pel1G CJA_3120 - pectate lyase, putative, pel1G 3052 35.40 -2 3706713..3707777 - 354 192362319 - CJA_3121 - hypothetical protein 3053 34.30 -2 3707761..3708069 - 102 192361032 - CJA_3122 - hypothetical protein 3054 57.70 +1 3708978..3710081 + 367 192359421 - CJA_3123 - hypothetical protein 52.09 MEAN 5.42 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0