version 1.0
Cellvibrio japonicus Ueda107, complete genome - 1..4576573 3754 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2930 45.39 -1 3521243..3523000 - 585 192362122 halA CJA_2999 - halogenase A 2931 47.85 0 3523065..3528740 - 1891 192361943 - CJA_3000 - MmpIV 2932 56.28 0 3528737..3542806 - 4689 192360862 - CJA_3001 - Beta-ketoacyl synthase, N-terminal domain protein 2933 56.31 0 3542803..3547968 - 1721 192359789 - CJA_3002 - oxidoreductase, zinc-binding dehydrogenase family 2934 53.12 0 3547961..3554392 - 2143 192358782 - CJA_3003 - EpoC 2935 46.60 -1 3554519..3558649 - 1376 192361741 - CJA_3004 - putative BarE protein 2936 54.47 0 3559508..3560704 - 398 192361387 - CJA_3005 - hypothetical protein 2937 51.44 0 3560704..3561051 - 115 192359476 - CJA_3006 - hypothetical protein 2938 56.82 0 3561161..3562816 - 551 192362297 gly43H CJA_3007 - beta-xylosidase/alpha-L-arabinfuranosidase, putative, gly43H 2939 53.38 0 3562885..3564450 - 521 192361206 xyl39A CJA_3008 - beta-xylosidase, putative, xyl39A 2940 51.80 0 3564474..3564890 - 138 192359930 - CJA_3009 - hypothetical protein 2941 56.08 0 3564891..3566297 - 468 192361062 cel5D CJA_3010 - cellulase, putative, cel5D 2942 51.41 0 3566443..3567615 - 390 192361893 - CJA_3011 - transcriptional regulator, AraC family domain protein 2943 54.70 0 3567963..3568931 - 322 192358906 abf43K CJA_3012 - alpha-L-arabinfuranosidase, putative, abf43K 2944 51.98 0 3568956..3570296 - 446 192359765 - CJA_3013 - YicJ-like protein 2945 54.50 0 3570437..3571036 - 199 192360595 - CJA_3014 - hypothetical protein 2946 53.96 0 3571088..3572590 - 500 192360687 - CJA_3015 - L-arabinose isomerase 2947 52.79 0 3572609..3573307 - 232 192362148 - CJA_3016 - putative L-ribulose-5-phosphate 4-epimerase 2948 57.21 0 3573304..3574974 - 556 192359667 araB CJA_3017 - L-ribulokinase 2949 55.82 0 3575088..3576092 - 334 192360043 gly43N CJA_3018 - beta-xylosidase/alpha-L-arabinfuranosidase, putative, gly43N 2950 54.29 0 3576459..3577403 + 314 192359233 - CJA_3019 - ABC transporter periplasmic binding protein 2951 56.38 0 3577516..3579012 + 498 192360047 - CJA_3020 - sugar ABC transporter ATP-binding protein 2952 55.16 0 3579027..3580043 + 338 192360673 - CJA_3021 - sugar ABC transporter permease protein 2953 52.66 0 3580036..3580992 + 318 192359503 - CJA_3022 - putative ABC transporter permease protein 2954 51.66 0 3581135..3582040 + 301 192360530 - CJA_3023 - hypothetical protein 2955 60.96 +1 3582218..3583462 + 414 192361163 - CJA_3024 - RNA polymerase sigma factor, sigma-70 family 2956 53.74 0 3583464..3583811 - 115 192359159 - CJA_3025 - hypothetical protein 2957 53.72 0 3584065..3584427 + 120 192360115 - CJA_3026 - hypothetical protein 2958 49.39 0 3584479..3584889 + 136 192360730 - CJA_3027 - hypothetical protein 2959 54.26 0 3584921..3585307 + 128 192359252 - CJA_3028 - DGPF domain superfamily 2960 51.83 0 3585279..3585797 + 172 192362516 - CJA_3029 - transcriptional regulatory protein 2961 50.86 0 3585856..3588063 - 735 192360015 - CJA_3030 - hypothetical protein 2962 57.79 +1 3588189..3590429 - 746 192359326 - CJA_3031 - cell wall degradation protein 2963 54.95 0 3590466..3591233 + 255 192361645 - CJA_3032 - hypothetical protein 2964 49.41 0 3591530..3593059 - 509 192361048 - CJA_3033 - Peptidase family S41B family 2965 51.07 0 3594429..3603770 - 3113 192360205 - CJA_3034 - hypothetical protein 2966 43.86 -1 3594517..3594630 + 37 192359112 - CJA_3035 - hypothetical protein 2967 54.87 0 3603508..3603702 + 64 192361300 - CJA_3037 - hypothetical protein 2968 49.84 0 3603692..3604636 - 314 192362367 - CJA_3036 - hypothetical protein 2969 54.06 0 3604695..3606701 - 668 192362463 - CJA_3038 - putative AAA family ATPase 2970 53.82 0 3606698..3608449 - 583 192361170 - CJA_3039 - hypothetical protein 2971 57.57 +1 3608463..3612464 - 1333 192360393 - CJA_3040 - hypothetical protein 2972 62.83 +1 3612555..3614276 - 573 192360026 - CJA_3041 - hypothetical protein 2973 64.40 +2 3614315..3615241 - 308 192361934 - CJA_3042 - hypothetical protein 2974 63.93 +2 3615270..3617756 - 828 192360695 - CJA_3043 - hypothetical protein 2975 63.38 +2 3617769..3619931 - 720 192359888 - CJA_3044 - hypothetical protein 2976 60.49 +1 3619959..3620363 - 134 192358799 - CJA_3045 - hypothetical protein 2977 59.42 +1 3620369..3622078 - 569 192361842 - CJA_3046 - hypothetical protein 2978 61.97 +1 3622078..3622737 - 219 192360310 - CJA_3047 - hypothetical protein 2979 59.60 +1 3622725..3623771 - 348 192360195 - CJA_3048 - hypothetical protein 2980 53.57 0 3623781..3623948 - 55 192361019 - CJA_3049 - hypothetical protein 2981 56.84 0 3623969..3625036 - 355 192361886 - CJA_3050 - hypothetical protein 2982 56.26 0 3625140..3625610 - 156 192359889 - CJA_3051 - conserved hypothetical phage tail region protein subfamily 2983 59.20 +1 3625603..3627168 - 521 192360874 - CJA_3052 - hypothetical protein 2984 53.03 0 3627207..3627668 - 153 192361672 - CJA_3053 - conserved hypothetical phage tail region protein subfamily 2985 58.08 +1 3627712..3629295 - 527 192362398 - CJA_3054 - Phage tail sheath protein 2986 57.23 0 3629338..3630153 - 271 192361577 - CJA_3055 - hypothetical protein 2987 55.45 0 3630203..3630817 - 204 192362141 - CJA_3056 - hypothetical protein 2988 56.88 0 3630821..3631147 - 108 192359073 - CJA_3057 - hypothetical protein 2989 49.49 0 3631154..3631252 - 32 192361634 - CJA_3058 - hypothetical protein 2990 46.76 0 3631300..3631515 - 71 192359297 - CJA_3059 - hypothetical protein 2991 52.08 0 3631675..3633162 + 495 192360302 mopR CJA_3060 - MopR 2992 53.00 0 3633292..3634623 - 443 192360940 xylA CJA_3061 - xylose isomerase 2993 55.20 0 3634666..3636147 - 493 192362034 - CJA_3062 - xylulose kinase (xylulokinase) 2994 54.59 0 3636343..3637203 + 286 192358846 nuhA CJA_3063 - Nudix hydrolase 2995 54.76 0 3637320..3638873 + 517 192360007 xylE CJA_3064 - MFS transporter 2996 52.80 0 3639042..3639380 - 112 192359899 - CJA_3065 - hypothetical protein 2997 52.00 0 3639064..3640884 + 606 192360972 xyn10C CJA_3066 - endo-beta-1,4-xylanase, xyn10C 2998 55.24 0 3640913..3642619 + 568 192361726 gly43J CJA_3067 - beta-xylosidase/alpha-L-arabinfuranosidase, putative, gly43J 2999 54.49 0 3642600..3645548 + 982 192361118 - CJA_3068 - hypothetical protein 3000 53.43 0 3645577..3646785 + 402 192362413 rspA CJA_3069 - Starvation sensing protein rspA 3001 51.42 0 3646845..3647972 + 375 192358849 gly43G CJA_3070 - beta-xylosidase/alpha-L-arabinfuranosidase, putative, gly43G 3002 49.23 0 3648182..3648766 + 194 192360928 - CJA_3071 - putative module of glucan-glucohydrolase 3003 42.04 -1 3648886..3652353 - 1155 192362075 - CJA_3072 - TonB-dependent receptor 3004 52.47 0 3652659..3653996 - 445 192359362 purA CJA_3073 - adenylosuccinate synthetase 3005 54.58 0 3654004..3655194 - 396 192358954 hisZ CJA_3074 - ATP phosphoribosyltransferase, regulatory subunit 3006 53.25 0 3655200..3655445 - 81 192360416 - CJA_3075 - hypothetical protein 3007 50.80 0 3655548..3656423 - 291 192360991 hflC CJA_3076 - HflC protein 3008 54.76 0 3656423..3657556 - 377 192360411 hflK CJA_3077 - HflK protein 3009 53.74 0 3657584..3658921 - 445 192361241 - CJA_3078 - hypothetical protein 3010 47.57 0 3658955..3659221 - 88 192362520 hfq CJA_3079 - Hfq protein 3011 54.18 0 3659344..3660360 - 338 192358868 miaA CJA_3080 - tRNA delta(2)-isopentenylpyrophosphate transferase 3012 57.10 0 3660364..3662244 - 626 192359923 mutL CJA_3081 - DNA mismatch repair protein MutL 3013 57.16 0 3662241..3663629 - 462 192360903 - CJA_3082 - N-acetylmuramoyl-L-alanine amidase 3014 43.65 -1 3663720..3663845 - 41 192361996 - CJA_3083 - hypothetical protein 3015 43.39 -1 3663914..3664102 - 62 192362219 - CJA_3084 - hypothetical protein 3016 57.14 0 3664107..3666320 - 737 192361865 - CJA_3085 - putative sensory box protein 3017 60.62 +1 3666515..3666994 - 159 192360576 - CJA_3086 - conserved hypothetical protein TIGR00150 3018 65.81 +2 3667004..3668518 - 504 192359898 - CJA_3087 - YjeF family protein 3019 58.56 +1 3668594..3670321 + 575 192359187 - CJA_3088 - hypothetical protein 3020 51.42 0 3670318..3670704 + 128 192361910 - CJA_3089 - hypothetical protein 3021 43.75 -1 3670667..3670762 + 31 192359012 - CJA_3091 - hypothetical protein 3022 50.34 0 3670755..3671483 - 242 192362264 - CJA_3090 - hypothetical protein 3023 48.65 0 3671583..3672359 - 258 192362335 - CJA_3092 - hypothetical protein 3024 53.62 0 3672568..3673755 + 395 192361608 - CJA_3093 - iron-sulfur cluster-binding protein 3025 52.18 0 3673897..3675435 + 512 192362384 - CJA_3094 - hypothetical protein 3026 56.61 0 3675466..3675972 + 168 192361160 - CJA_3095 - hypothetical protein 3027 61.09 +1 3675983..3677971 + 662 192360342 - CJA_3096 - hypothetical protein 3028 42.91 -1 3678805..3679671 + 288 192360426 - CJA_3097 - hypothetical protein 3029 61.40 +1 3679777..3680592 + 271 192361976 - CJA_3098 - dehydrogenase subunit 52.09 MEAN 5.42 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0