version 1.0
Cellvibrio japonicus Ueda107, complete genome - 1..4576573 3754 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2909 56.08 0 3493066..3493320 + 84 192359892 - CJA_2977 - prevent-host-death family protein 2910 53.18 0 3493313..3493579 + 88 192360983 - CJA_2979 - addiction module toxin, Txe/YoeB family 2911 56.75 0 3493576..3494967 - 463 192362526 dnaB CJA_2978 - replicative DNA helicase 2912 54.59 0 3495105..3495551 - 148 192359627 rplI CJA_2980 - ribosomal protein L9 2913 51.32 0 3495566..3495793 - 75 192362397 rpsR CJA_2981 - ribosomal protein S18 2914 52.70 0 3495797..3496240 - 147 192358927 rpsF CJA_2982 - 30S ribosomal protein S6 2915 59.14 +1 3496704..3498416 + 570 192360233 cel5B CJA_2983 - endo-1,4-beta glucanase, cel5B 2916 59.82 +1 3498699..3501836 + 1045 192361571 glu16D CJA_2984 - beta glucanase, putative, glu16D 2917 58.86 +1 3501997..3505581 + 1194 192361269 gly16A CJA_2985 - glycoside hydrolase, putative, gly16A 2918 52.45 0 3505669..3506301 + 210 192362151 - CJA_2986 - PEP-CTERM putative exosortase interaction domain protein 2919 47.22 0 3506355..3507506 - 383 192359768 - CJA_2987 - ISCja2, transposase 2920 49.76 0 3507653..3508681 - 342 192360646 - CJA_2988 - hypothetical protein 2921 49.46 0 3509103..3509654 + 183 192362379 - CJA_2989 - hypothetical protein 2922 54.05 0 3509671..3510201 + 176 192361609 - CJA_2990 - putative lipoprotein 2923 48.00 0 3510282..3511433 - 383 192360377 - CJA_2991 - putative DNA binding protein 2924 45.36 -1 3511473..3511655 - 60 192361931 - CJA_2992 - hypothetical protein 2925 53.97 0 3511820..3513433 - 537 192361989 chi18C CJA_2993 - endo-chitinase, putative, chi18C 2926 59.20 +1 3513808..3514557 - 249 192360670 - CJA_2994 - RNA methyltransferase, TrmH family, group 3 2927 56.39 0 3514706..3517606 - 966 192360091 - CJA_2995 - putative ribonuclease R 2928 47.56 0 3518071..3518850 - 259 192359019 pchC CJA_2997 - pyochelin biosynthetic protein PchC 2929 45.44 -1 3518881..3521226 - 781 192361164 pksE CJA_2998 - involved in polyketide synthesis 2930 45.39 -1 3521243..3523000 - 585 192362122 halA CJA_2999 - halogenase A 2931 47.85 0 3523065..3528740 - 1891 192361943 - CJA_3000 - MmpIV 2932 56.28 0 3528737..3542806 - 4689 192360862 - CJA_3001 - Beta-ketoacyl synthase, N-terminal domain protein 2933 56.31 0 3542803..3547968 - 1721 192359789 - CJA_3002 - oxidoreductase, zinc-binding dehydrogenase family 2934 53.12 0 3547961..3554392 - 2143 192358782 - CJA_3003 - EpoC 2935 46.60 -1 3554519..3558649 - 1376 192361741 - CJA_3004 - putative BarE protein 2936 54.47 0 3559508..3560704 - 398 192361387 - CJA_3005 - hypothetical protein 2937 51.44 0 3560704..3561051 - 115 192359476 - CJA_3006 - hypothetical protein 2938 56.82 0 3561161..3562816 - 551 192362297 gly43H CJA_3007 - beta-xylosidase/alpha-L-arabinfuranosidase, putative, gly43H 2939 53.38 0 3562885..3564450 - 521 192361206 xyl39A CJA_3008 - beta-xylosidase, putative, xyl39A 2940 51.80 0 3564474..3564890 - 138 192359930 - CJA_3009 - hypothetical protein 2941 56.08 0 3564891..3566297 - 468 192361062 cel5D CJA_3010 - cellulase, putative, cel5D 2942 51.41 0 3566443..3567615 - 390 192361893 - CJA_3011 - transcriptional regulator, AraC family domain protein 2943 54.70 0 3567963..3568931 - 322 192358906 abf43K CJA_3012 - alpha-L-arabinfuranosidase, putative, abf43K 2944 51.98 0 3568956..3570296 - 446 192359765 - CJA_3013 - YicJ-like protein 2945 54.50 0 3570437..3571036 - 199 192360595 - CJA_3014 - hypothetical protein 2946 53.96 0 3571088..3572590 - 500 192360687 - CJA_3015 - L-arabinose isomerase 2947 52.79 0 3572609..3573307 - 232 192362148 - CJA_3016 - putative L-ribulose-5-phosphate 4-epimerase 2948 57.21 0 3573304..3574974 - 556 192359667 araB CJA_3017 - L-ribulokinase 2949 55.82 0 3575088..3576092 - 334 192360043 gly43N CJA_3018 - beta-xylosidase/alpha-L-arabinfuranosidase, putative, gly43N 2950 54.29 0 3576459..3577403 + 314 192359233 - CJA_3019 - ABC transporter periplasmic binding protein 2951 56.38 0 3577516..3579012 + 498 192360047 - CJA_3020 - sugar ABC transporter ATP-binding protein 2952 55.16 0 3579027..3580043 + 338 192360673 - CJA_3021 - sugar ABC transporter permease protein 2953 52.66 0 3580036..3580992 + 318 192359503 - CJA_3022 - putative ABC transporter permease protein 2954 51.66 0 3581135..3582040 + 301 192360530 - CJA_3023 - hypothetical protein 2955 60.96 +1 3582218..3583462 + 414 192361163 - CJA_3024 - RNA polymerase sigma factor, sigma-70 family 2956 53.74 0 3583464..3583811 - 115 192359159 - CJA_3025 - hypothetical protein 2957 53.72 0 3584065..3584427 + 120 192360115 - CJA_3026 - hypothetical protein 2958 49.39 0 3584479..3584889 + 136 192360730 - CJA_3027 - hypothetical protein 2959 54.26 0 3584921..3585307 + 128 192359252 - CJA_3028 - DGPF domain superfamily 2960 51.83 0 3585279..3585797 + 172 192362516 - CJA_3029 - transcriptional regulatory protein 2961 50.86 0 3585856..3588063 - 735 192360015 - CJA_3030 - hypothetical protein 2962 57.79 +1 3588189..3590429 - 746 192359326 - CJA_3031 - cell wall degradation protein 2963 54.95 0 3590466..3591233 + 255 192361645 - CJA_3032 - hypothetical protein 2964 49.41 0 3591530..3593059 - 509 192361048 - CJA_3033 - Peptidase family S41B family 2965 51.07 0 3594429..3603770 - 3113 192360205 - CJA_3034 - hypothetical protein 2966 43.86 -1 3594517..3594630 + 37 192359112 - CJA_3035 - hypothetical protein 2967 54.87 0 3603508..3603702 + 64 192361300 - CJA_3037 - hypothetical protein 2968 49.84 0 3603692..3604636 - 314 192362367 - CJA_3036 - hypothetical protein 2969 54.06 0 3604695..3606701 - 668 192362463 - CJA_3038 - putative AAA family ATPase 2970 53.82 0 3606698..3608449 - 583 192361170 - CJA_3039 - hypothetical protein 2971 57.57 +1 3608463..3612464 - 1333 192360393 - CJA_3040 - hypothetical protein 2972 62.83 +1 3612555..3614276 - 573 192360026 - CJA_3041 - hypothetical protein 2973 64.40 +2 3614315..3615241 - 308 192361934 - CJA_3042 - hypothetical protein 2974 63.93 +2 3615270..3617756 - 828 192360695 - CJA_3043 - hypothetical protein 2975 63.38 +2 3617769..3619931 - 720 192359888 - CJA_3044 - hypothetical protein 2976 60.49 +1 3619959..3620363 - 134 192358799 - CJA_3045 - hypothetical protein 2977 59.42 +1 3620369..3622078 - 569 192361842 - CJA_3046 - hypothetical protein 2978 61.97 +1 3622078..3622737 - 219 192360310 - CJA_3047 - hypothetical protein 2979 59.60 +1 3622725..3623771 - 348 192360195 - CJA_3048 - hypothetical protein 2980 53.57 0 3623781..3623948 - 55 192361019 - CJA_3049 - hypothetical protein 2981 56.84 0 3623969..3625036 - 355 192361886 - CJA_3050 - hypothetical protein 2982 56.26 0 3625140..3625610 - 156 192359889 - CJA_3051 - conserved hypothetical phage tail region protein subfamily 2983 59.20 +1 3625603..3627168 - 521 192360874 - CJA_3052 - hypothetical protein 2984 53.03 0 3627207..3627668 - 153 192361672 - CJA_3053 - conserved hypothetical phage tail region protein subfamily 2985 58.08 +1 3627712..3629295 - 527 192362398 - CJA_3054 - Phage tail sheath protein 2986 57.23 0 3629338..3630153 - 271 192361577 - CJA_3055 - hypothetical protein 2987 55.45 0 3630203..3630817 - 204 192362141 - CJA_3056 - hypothetical protein 2988 56.88 0 3630821..3631147 - 108 192359073 - CJA_3057 - hypothetical protein 2989 49.49 0 3631154..3631252 - 32 192361634 - CJA_3058 - hypothetical protein 2990 46.76 0 3631300..3631515 - 71 192359297 - CJA_3059 - hypothetical protein 2991 52.08 0 3631675..3633162 + 495 192360302 mopR CJA_3060 - MopR 2992 53.00 0 3633292..3634623 - 443 192360940 xylA CJA_3061 - xylose isomerase 2993 55.20 0 3634666..3636147 - 493 192362034 - CJA_3062 - xylulose kinase (xylulokinase) 2994 54.59 0 3636343..3637203 + 286 192358846 nuhA CJA_3063 - Nudix hydrolase 2995 54.76 0 3637320..3638873 + 517 192360007 xylE CJA_3064 - MFS transporter 2996 52.80 0 3639042..3639380 - 112 192359899 - CJA_3065 - hypothetical protein 2997 52.00 0 3639064..3640884 + 606 192360972 xyn10C CJA_3066 - endo-beta-1,4-xylanase, xyn10C 2998 55.24 0 3640913..3642619 + 568 192361726 gly43J CJA_3067 - beta-xylosidase/alpha-L-arabinfuranosidase, putative, gly43J 2999 54.49 0 3642600..3645548 + 982 192361118 - CJA_3068 - hypothetical protein 3000 53.43 0 3645577..3646785 + 402 192362413 rspA CJA_3069 - Starvation sensing protein rspA 3001 51.42 0 3646845..3647972 + 375 192358849 gly43G CJA_3070 - beta-xylosidase/alpha-L-arabinfuranosidase, putative, gly43G 3002 49.23 0 3648182..3648766 + 194 192360928 - CJA_3071 - putative module of glucan-glucohydrolase 3003 42.04 -1 3648886..3652353 - 1155 192362075 - CJA_3072 - TonB-dependent receptor 3004 52.47 0 3652659..3653996 - 445 192359362 purA CJA_3073 - adenylosuccinate synthetase 3005 54.58 0 3654004..3655194 - 396 192358954 hisZ CJA_3074 - ATP phosphoribosyltransferase, regulatory subunit 3006 53.25 0 3655200..3655445 - 81 192360416 - CJA_3075 - hypothetical protein 3007 50.80 0 3655548..3656423 - 291 192360991 hflC CJA_3076 - HflC protein 3008 54.76 0 3656423..3657556 - 377 192360411 hflK CJA_3077 - HflK protein 52.09 MEAN 5.42 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0