version 1.0
Cellvibrio japonicus Ueda107, complete genome - 1..4576573 3754 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2575 52.06 0 3103241..3103870 + 209 192362093 - CJA_2638 - carbonic anhydrase 2576 47.83 0 3103889..3106303 + 804 192360986 - CJA_2639 - PAS domain S-box protein 2577 50.46 0 3106313..3108058 - 581 192360433 - CJA_2640 - putative response regulator 2578 48.39 0 3108082..3108360 - 92 192359388 - CJA_2641 - putative SpoIIAA family protein 2579 56.87 0 3108592..3110112 - 506 192360765 - CJA_2642 - fumarate hydratase, class I 2580 57.22 0 3110245..3111027 + 260 192359289 - CJA_2644 - hypothetical protein 2581 57.27 0 3110275..3111051 - 258 192360010 - CJA_2643 - hypothetical protein 2582 50.43 0 3111223..3111807 - 194 192360362 - CJA_2645 - superoxide dismutase 2583 54.15 0 3112046..3113683 - 545 192359320 groL CJA_2646 - chaperonin GroEL 2584 51.14 0 3113746..3114273 - 175 192360354 groES CJA_2647 - GroES protein 2585 58.84 +1 3114312..3114809 - 165 192361548 fsxA CJA_2648 - fxsA protein 2586 54.18 0 3114843..3115859 - 338 192361650 - CJA_2649 - hypothetical protein 2587 62.42 +1 3116051..3116380 + 109 192360074 - CJA_2651 - MGMT family protein 2588 57.27 0 3116337..3117773 - 478 192358898 - CJA_2650 - AmpG protein 2589 50.10 0 3117793..3118275 - 160 192362145 - CJA_2652 - hypothetical protein 2590 53.23 0 3118315..3119304 - 329 192361906 - CJA_2653 - putative AmpE 2591 54.64 0 3119315..3119863 - 182 192360470 ampD CJA_2654 - N-acetyl-anhydromuramyl-L-alanine amidase AmpD 2592 57.74 +1 3119869..3121392 - 507 192361342 - CJA_2655 - probable ATPase 2593 62.04 +1 3121547..3122194 + 215 192359082 - CJA_2656 - hypothetical protein 2594 58.97 +1 3122536..3127809 + 1757 192360029 cbp32B CJA_2657 - carbohydrate binding protein, putative, cbp32B 2595 54.37 0 3127875..3128297 - 140 192358914 - CJA_2658 - OsmC/Ohr family protein 2596 52.17 0 3128597..3129196 + 199 192359726 - CJA_2659 - cyclic AMP receptor-like protein 2597 54.07 0 3129270..3130166 - 298 192361959 trpC CJA_2660 - indole-3-glycerol phosphate synthase 2598 53.68 0 3130120..3131151 - 343 192359500 trpD CJA_2661 - anthranilate phosphoribosyltransferase 2599 50.17 0 3131254..3131835 - 193 192360584 trpG CJA_2662 - anthranilate synthase component II 2600 54.92 0 3131832..3133346 - 504 192361771 trpE CJA_2663 - anthranilate synthase component I 2601 53.53 0 3133646..3134368 - 240 192359547 - CJA_2664 - rRNA methylase 2602 55.80 0 3134382..3136001 - 539 192360573 - CJA_2665 - uncharacterized FAD-dependent dehydrogenase 2603 51.14 0 3136058..3136759 - 233 192361209 rpe CJA_2666 - ribulose-phosphate 3-epimerase 2604 53.87 0 3136825..3137934 + 369 192359669 - CJA_2667 - hypothetical protein 2605 51.73 0 3138237..3139073 - 278 192360557 - CJA_2668 - DTW domain protein 2606 51.96 0 3139140..3139547 - 135 192361247 - CJA_2670 - putative preprotein translocase SecG subunit 2607 49.08 0 3139608..3140369 - 253 192362276 - CJA_2671 - triosephosphate isomerase 2608 51.05 0 3140596..3141933 - 445 192360111 glmM CJA_2672 - phosphoglucosamine mutase 2609 51.57 0 3141985..3142845 - 286 192360527 folP CJA_2673 - dihydropteroate synthase 2610 52.77 0 3142917..3144830 - 637 192361874 ftsH CJA_2674 - cell division protein FtsH 2611 52.99 0 3144878..3145513 - 211 192359469 rrmJ CJA_2675 - ribosomal RNA large subunit J 2612 48.04 0 3145644..3145949 + 101 192359755 - CJA_2676 - hypothetical protein 2613 52.40 0 3146073..3146759 - 228 192361017 - CJA_2677 - kinesin light chain-like protein 2614 52.67 0 3146743..3149157 - 804 192359004 - CJA_2678 - putative lipoprotein 2615 54.15 0 3149195..3151975 - 926 192359776 hasR CJA_2679 - HasR 2616 56.55 0 3152164..3153132 - 322 192360635 - CJA_2680 - sigma factor regulatory protein, FecR/PupR family 2617 54.53 0 3153331..3153849 - 172 192361496 - CJA_2681 - RNA polymerase sigma factor, sigma-70 family 2618 59.06 +1 3154085..3154702 + 205 192361563 - CJA_2682 - Heme oxygenase 2619 57.74 +1 3154702..3155082 + 126 192362458 - CJA_2683 - hypothetical protein 2620 57.87 +1 3155079..3155885 + 268 192360206 - CJA_2684 - possible energy transducer TonB, C-terminal region 2621 48.96 0 3155975..3156454 - 159 192360133 greA CJA_2685 - transcription elongation factor 2622 54.55 0 3156470..3159688 - 1072 192362421 carB CJA_2686 - carbamoyl-phosphate synthase, large subunit 2623 56.94 0 3159700..3160902 - 400 192361439 carA CJA_2687 - carbamoyl-phosphate synthase, small subunit 2624 57.85 +1 3161429..3162256 - 275 192359909 dapB CJA_2688 - dihydrodipicolinate reductase 2625 54.05 0 3162249..3162866 - 205 192358856 ribA CJA_2689 - GTP cyclohydrolase II 2626 54.03 0 3162907..3163539 - 210 192362077 - CJA_2690 - putative conserved hypothetical protein TIGR02281 2627 52.47 0 3163589..3164074 - 161 192360941 - CJA_2691 - Phosphatidylglycerophosphatase A 2628 57.19 0 3164077..3165057 - 326 192360501 thiL CJA_2692 - thiamine-monophosphate kinase 2629 51.08 0 3165084..3165590 - 168 192359459 nusB CJA_2693 - transcription antitermination factor NusB 2630 52.12 0 3165684..3166178 - 164 192361378 ribH CJA_2694 - 6,7-dimethyl-8-ribityllumazine synthase 2631 57.37 0 3166198..3167316 - 372 192362101 ribB/A CJA_2695 - bifunctional protein 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II 2632 52.27 0 3167353..3168012 - 219 192361915 ribE CJA_2696 - riboflavin synthase, alpha subunit 2633 55.31 0 3168021..3168566 - 181 192358975 - CJA_2697 - RDD family domain protein 2634 60.85 +1 3168651..3169802 - 383 192359452 ribD CJA_2698 - riboflavin biosynthesis protein RibD 2635 53.41 0 3169806..3170303 - 165 192362177 - CJA_2699 - conserved hypothetical protein TIGR00244 2636 52.72 0 3170351..3171196 - 281 192360101 - CJA_2700 - putative amino acid ABC transporter, periplasmic amino acid-binding portion 2637 53.23 0 3171196..3171984 - 262 192359461 - CJA_2701 - GGDEF domain protein 2638 51.41 0 3172037..3172744 - 235 192359041 - CJA_2702 - hypothetical protein 2639 54.27 0 3173003..3174268 - 421 192360731 glyA CJA_2703 - serine hydroxymethyltransferase 2640 49.02 0 3174315..3174467 - 50 192358869 - CJA_2704 - hypothetical protein 2641 49.07 0 3174749..3175288 + 179 192359610 - CJA_2705 - hypothetical protein 2642 49.58 0 3175359..3178325 - 988 192362416 xyl31A CJA_2706 - alpha-xylosidase, putative, xyl31A 2643 47.63 0 3178366..3180093 - 575 192361337 bgl35A CJA_2707 - beta-galactosidase, putative, bgl35A 2644 30.56 -2 3180130..3180237 + 35 192361737 - CJA_2708 - hypothetical protein 2645 44.23 -1 3180292..3183192 - 966 192358982 - CJA_2709 - TonB-dependent receptor 2646 50.66 0 3183280..3185628 - 782 192360052 afc95A CJA_2710 - alpha-L-fucosidase, putative, afc95A 2647 43.75 -1 3185748..3185891 + 47 192362088 - CJA_2711 - hypothetical protein 2648 47.31 0 3185897..3185989 - 30 192359259 - CJA_2712 - hypothetical protein 2649 48.52 0 3186035..3187522 - 495 192359236 - CJA_2713 - tryptophan halogenase 2650 51.95 0 3187708..3188679 + 323 192359879 - CJA_2714 - hypothetical protein 2651 50.86 0 3188746..3189852 + 368 192360942 - CJA_2715 - putative outer membrane phospholipase A precursor 2652 49.04 0 3189930..3190292 - 120 192359571 - CJA_2716 - hypothetical protein 2653 51.76 0 3190294..3192741 - 815 192360637 - CJA_2717 - hypothetical protein 2654 52.69 0 3193371..3194429 + 352 192361203 - CJA_2718 - ABC transporter, periplasmic substrate-binding protein 2655 53.36 0 3194507..3195325 + 272 192362314 - CJA_2719 - ABC transporter, permease protein 2656 56.20 0 3195398..3196171 + 257 192359042 - CJA_2720 - ABC transporter, ATP-binding protein 2657 55.28 0 3196202..3196939 + 245 192360110 - CJA_2721 - hypothetical protein 2658 56.54 0 3196957..3197598 + 213 192361957 - CJA_2722 - hypothetical protein 2659 56.58 0 3197686..3201303 + 1205 192360281 - CJA_2723 - urea amidolyase homolog 2660 50.53 0 3201370..3203835 - 821 192359401 - CJA_2724 - hypothetical protein 2661 51.53 0 3204037..3204921 + 294 192361900 nadC CJA_2725 - nicotinate-nucleotide pyrophosphorylase 2662 43.41 -1 3204955..3207981 - 1008 192360746 - CJA_2726 - spermine/spermidine synthase family protein 2663 42.61 -1 3208083..3208826 - 247 192362377 tfpZ CJA_2727 - type IV pilin accessory protein 2664 44.03 -1 3208852..3209337 - 161 192361536 pilA CJA_2728 - Fimbrial protein precursor (Pilin) 2665 43.31 -1 3209443..3209943 - 166 192360207 - CJA_2729 - pilin 2666 52.21 0 3210370..3212091 + 573 192359380 pilB CJA_2730 - PilB protein 2667 42.35 -1 3212098..3213384 + 428 192359121 pilC CJA_2731 - type IV pilus biogenesis protein PilC 2668 45.95 -1 3213438..3214364 + 308 192361521 pilD CJA_2732 - type IV pilus prepilin peptidase PilD 2669 53.56 0 3214376..3214993 + 205 192361697 coaE CJA_2733 - dephospho-CoA kinase 2670 45.50 -1 3214993..3215214 + 73 192360822 - CJA_2734 - Domain of unknown function (DUF329) family 2671 51.55 0 3215229..3216293 - 354 192360453 - CJA_2735 - hypothetical protein 2672 52.95 0 3216329..3216802 - 157 192359628 - CJA_2736 - hypothetical protein 2673 52.81 0 3216839..3217567 - 242 192362100 - CJA_2737 - putative lipoprotein 2674 56.44 0 3217795..3219612 + 605 192361322 dsbD CJA_2738 - c-type cytochrome biogenesis protein 52.09 MEAN 5.42 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0