version 1.0
Cellvibrio japonicus Ueda107, complete genome - 1..4576573 3754 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2551 52.45 0 3064561..3065193 + 210 192361095 - CJA_2614 - hypothetical protein 2552 52.90 0 3065346..3066398 + 350 192361419 cbp2E CJA_2615 - carbohydrate binding protein, putative, cbp2E 2553 53.73 0 3066425..3069793 + 1122 192362498 cbp2D CJA_2616 - carbohydrate binding protein, putative, cbp2D 2554 52.27 0 3069841..3071049 + 402 192360353 - CJA_2617 - hypothetical protein 2555 44.69 -1 3071501..3073375 + 624 192359349 amy13A CJA_2618 - alpha amylase, putative, amy13A 2556 49.17 0 3073448..3074053 - 201 192360729 wapA CJA_2619 - Rhs family protein 2557 46.02 -1 3074686..3075702 - 338 192359984 - CJA_2620 - hypothetical protein 2558 45.87 -1 3076072..3076422 + 116 192359549 - CJA_2621 - IS66 family element, Orf2 protein 2559 46.91 0 3076455..3078023 + 522 192361658 - CJA_2622 - IS66 family element, transposase 2560 50.39 0 3078841..3086220 - 2459 192359575 - CJA_2623 - Rhs family protein 2561 49.22 0 3086447..3086830 - 127 192359711 gloA CJA_2624 - lactoylglutathione lyase 2562 50.47 0 3086950..3088647 - 565 192362127 - CJA_2625 - hypothetical protein 2563 59.34 +1 3088788..3089579 - 263 192362456 - CJA_2626 - TRAP transporter, DctM-like membrane protein 2564 48.15 0 3089576..3089791 - 71 192361231 ccoS CJA_2627 - cytochrome oxidase maturation protein, cbb3-type 2565 56.88 0 3089810..3092230 - 806 192360364 - CJA_2628 - cation-transporting P-type ATPase 2566 50.87 0 3092231..3092749 - 172 192360054 - CJA_2629 - hypothetical protein 2567 50.04 0 3092821..3094233 - 470 192361907 - CJA_2630 - iron-sulfur cluster-binding protein 2568 51.93 0 3094365..3095273 - 302 192361134 ccoP CJA_2631 - cytochrome c oxidase, cbb3-type, subunit III 2569 50.26 0 3095292..3095486 - 64 192359857 - CJA_2632 - cytochrome c oxidase subunit-related protein 2570 52.45 0 3095486..3096097 - 203 192359498 ccoO CJA_2633 - cytochrome c oxidase, cbb3-type, subunit II 2571 53.43 0 3096108..3097565 - 485 192359815 ccoN CJA_2634 - cytochrome c oxidase, cbb3-type, subunit I 2572 53.45 0 3097861..3099078 - 405 192358790 argG CJA_2635 - argininosuccinate synthase 2573 55.12 0 3099430..3101325 - 631 192362043 - CJA_2636 - methyl-accepting chemotaxis protein 2574 55.22 0 3101512..3103005 - 497 192360953 sbcB CJA_2637 - exodeoxyribonuclease I 2575 52.06 0 3103241..3103870 + 209 192362093 - CJA_2638 - carbonic anhydrase 2576 47.83 0 3103889..3106303 + 804 192360986 - CJA_2639 - PAS domain S-box protein 2577 50.46 0 3106313..3108058 - 581 192360433 - CJA_2640 - putative response regulator 2578 48.39 0 3108082..3108360 - 92 192359388 - CJA_2641 - putative SpoIIAA family protein 2579 56.87 0 3108592..3110112 - 506 192360765 - CJA_2642 - fumarate hydratase, class I 2580 57.22 0 3110245..3111027 + 260 192359289 - CJA_2644 - hypothetical protein 2581 57.27 0 3110275..3111051 - 258 192360010 - CJA_2643 - hypothetical protein 2582 50.43 0 3111223..3111807 - 194 192360362 - CJA_2645 - superoxide dismutase 2583 54.15 0 3112046..3113683 - 545 192359320 groL CJA_2646 - chaperonin GroEL 2584 51.14 0 3113746..3114273 - 175 192360354 groES CJA_2647 - GroES protein 2585 58.84 +1 3114312..3114809 - 165 192361548 fsxA CJA_2648 - fxsA protein 2586 54.18 0 3114843..3115859 - 338 192361650 - CJA_2649 - hypothetical protein 2587 62.42 +1 3116051..3116380 + 109 192360074 - CJA_2651 - MGMT family protein 2588 57.27 0 3116337..3117773 - 478 192358898 - CJA_2650 - AmpG protein 2589 50.10 0 3117793..3118275 - 160 192362145 - CJA_2652 - hypothetical protein 2590 53.23 0 3118315..3119304 - 329 192361906 - CJA_2653 - putative AmpE 2591 54.64 0 3119315..3119863 - 182 192360470 ampD CJA_2654 - N-acetyl-anhydromuramyl-L-alanine amidase AmpD 2592 57.74 +1 3119869..3121392 - 507 192361342 - CJA_2655 - probable ATPase 2593 62.04 +1 3121547..3122194 + 215 192359082 - CJA_2656 - hypothetical protein 2594 58.97 +1 3122536..3127809 + 1757 192360029 cbp32B CJA_2657 - carbohydrate binding protein, putative, cbp32B 2595 54.37 0 3127875..3128297 - 140 192358914 - CJA_2658 - OsmC/Ohr family protein 2596 52.17 0 3128597..3129196 + 199 192359726 - CJA_2659 - cyclic AMP receptor-like protein 2597 54.07 0 3129270..3130166 - 298 192361959 trpC CJA_2660 - indole-3-glycerol phosphate synthase 2598 53.68 0 3130120..3131151 - 343 192359500 trpD CJA_2661 - anthranilate phosphoribosyltransferase 2599 50.17 0 3131254..3131835 - 193 192360584 trpG CJA_2662 - anthranilate synthase component II 2600 54.92 0 3131832..3133346 - 504 192361771 trpE CJA_2663 - anthranilate synthase component I 2601 53.53 0 3133646..3134368 - 240 192359547 - CJA_2664 - rRNA methylase 2602 55.80 0 3134382..3136001 - 539 192360573 - CJA_2665 - uncharacterized FAD-dependent dehydrogenase 2603 51.14 0 3136058..3136759 - 233 192361209 rpe CJA_2666 - ribulose-phosphate 3-epimerase 2604 53.87 0 3136825..3137934 + 369 192359669 - CJA_2667 - hypothetical protein 2605 51.73 0 3138237..3139073 - 278 192360557 - CJA_2668 - DTW domain protein 2606 51.96 0 3139140..3139547 - 135 192361247 - CJA_2670 - putative preprotein translocase SecG subunit 2607 49.08 0 3139608..3140369 - 253 192362276 - CJA_2671 - triosephosphate isomerase 2608 51.05 0 3140596..3141933 - 445 192360111 glmM CJA_2672 - phosphoglucosamine mutase 2609 51.57 0 3141985..3142845 - 286 192360527 folP CJA_2673 - dihydropteroate synthase 2610 52.77 0 3142917..3144830 - 637 192361874 ftsH CJA_2674 - cell division protein FtsH 2611 52.99 0 3144878..3145513 - 211 192359469 rrmJ CJA_2675 - ribosomal RNA large subunit J 2612 48.04 0 3145644..3145949 + 101 192359755 - CJA_2676 - hypothetical protein 2613 52.40 0 3146073..3146759 - 228 192361017 - CJA_2677 - kinesin light chain-like protein 2614 52.67 0 3146743..3149157 - 804 192359004 - CJA_2678 - putative lipoprotein 2615 54.15 0 3149195..3151975 - 926 192359776 hasR CJA_2679 - HasR 2616 56.55 0 3152164..3153132 - 322 192360635 - CJA_2680 - sigma factor regulatory protein, FecR/PupR family 2617 54.53 0 3153331..3153849 - 172 192361496 - CJA_2681 - RNA polymerase sigma factor, sigma-70 family 2618 59.06 +1 3154085..3154702 + 205 192361563 - CJA_2682 - Heme oxygenase 2619 57.74 +1 3154702..3155082 + 126 192362458 - CJA_2683 - hypothetical protein 2620 57.87 +1 3155079..3155885 + 268 192360206 - CJA_2684 - possible energy transducer TonB, C-terminal region 2621 48.96 0 3155975..3156454 - 159 192360133 greA CJA_2685 - transcription elongation factor 2622 54.55 0 3156470..3159688 - 1072 192362421 carB CJA_2686 - carbamoyl-phosphate synthase, large subunit 2623 56.94 0 3159700..3160902 - 400 192361439 carA CJA_2687 - carbamoyl-phosphate synthase, small subunit 2624 57.85 +1 3161429..3162256 - 275 192359909 dapB CJA_2688 - dihydrodipicolinate reductase 2625 54.05 0 3162249..3162866 - 205 192358856 ribA CJA_2689 - GTP cyclohydrolase II 2626 54.03 0 3162907..3163539 - 210 192362077 - CJA_2690 - putative conserved hypothetical protein TIGR02281 2627 52.47 0 3163589..3164074 - 161 192360941 - CJA_2691 - Phosphatidylglycerophosphatase A 2628 57.19 0 3164077..3165057 - 326 192360501 thiL CJA_2692 - thiamine-monophosphate kinase 2629 51.08 0 3165084..3165590 - 168 192359459 nusB CJA_2693 - transcription antitermination factor NusB 2630 52.12 0 3165684..3166178 - 164 192361378 ribH CJA_2694 - 6,7-dimethyl-8-ribityllumazine synthase 2631 57.37 0 3166198..3167316 - 372 192362101 ribB/A CJA_2695 - bifunctional protein 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II 2632 52.27 0 3167353..3168012 - 219 192361915 ribE CJA_2696 - riboflavin synthase, alpha subunit 2633 55.31 0 3168021..3168566 - 181 192358975 - CJA_2697 - RDD family domain protein 2634 60.85 +1 3168651..3169802 - 383 192359452 ribD CJA_2698 - riboflavin biosynthesis protein RibD 2635 53.41 0 3169806..3170303 - 165 192362177 - CJA_2699 - conserved hypothetical protein TIGR00244 2636 52.72 0 3170351..3171196 - 281 192360101 - CJA_2700 - putative amino acid ABC transporter, periplasmic amino acid-binding portion 2637 53.23 0 3171196..3171984 - 262 192359461 - CJA_2701 - GGDEF domain protein 2638 51.41 0 3172037..3172744 - 235 192359041 - CJA_2702 - hypothetical protein 2639 54.27 0 3173003..3174268 - 421 192360731 glyA CJA_2703 - serine hydroxymethyltransferase 2640 49.02 0 3174315..3174467 - 50 192358869 - CJA_2704 - hypothetical protein 2641 49.07 0 3174749..3175288 + 179 192359610 - CJA_2705 - hypothetical protein 2642 49.58 0 3175359..3178325 - 988 192362416 xyl31A CJA_2706 - alpha-xylosidase, putative, xyl31A 2643 47.63 0 3178366..3180093 - 575 192361337 bgl35A CJA_2707 - beta-galactosidase, putative, bgl35A 2644 30.56 -2 3180130..3180237 + 35 192361737 - CJA_2708 - hypothetical protein 2645 44.23 -1 3180292..3183192 - 966 192358982 - CJA_2709 - TonB-dependent receptor 2646 50.66 0 3183280..3185628 - 782 192360052 afc95A CJA_2710 - alpha-L-fucosidase, putative, afc95A 2647 43.75 -1 3185748..3185891 + 47 192362088 - CJA_2711 - hypothetical protein 2648 47.31 0 3185897..3185989 - 30 192359259 - CJA_2712 - hypothetical protein 2649 48.52 0 3186035..3187522 - 495 192359236 - CJA_2713 - tryptophan halogenase 2650 51.95 0 3187708..3188679 + 323 192359879 - CJA_2714 - hypothetical protein 52.09 MEAN 5.42 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0