version 1.0
Cellvibrio japonicus Ueda107, complete genome - 1..4576573 3754 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2382 51.99 0 2789506..2790984 + 492 192362241 - CJA_2444 - histidine kinase sensor protein 2383 51.30 0 2790994..2791416 + 140 192361864 - CJA_2445 - two-component response regulator 2384 51.91 0 2791417..2793930 + 837 192361550 - CJA_2447 - MorA 2385 53.64 0 2793920..2794840 - 306 192360549 metR-1 CJA_2446 - transcriptional activator MetR 2386 58.11 +1 2795048..2797477 + 809 192359663 metE CJA_2448 - 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 2387 54.72 0 2798709..2799386 + 225 192362382 - CJA_2449 - hypothetical protein 2388 53.33 0 2800559..2800663 - 34 192360003 - CJA_2450 - hypothetical protein 2389 41.16 -2 2802455..2802748 - 97 192359050 cas2 CJA_2451 - CRISPR-associated protein Cas2 2390 44.15 -1 2802757..2803773 - 338 192359205 cas1 CJA_2452 - CRISPR-associated protein Cas1 2391 44.71 -1 2803770..2804402 - 210 192359223 cas4 CJA_2453 - CRISPR-associated protein Cas4 2392 41.25 -2 2804389..2805222 - 277 192361649 csd2 CJA_2454 - CRISPR-associated protein, Csd2 family 2393 43.20 -1 2805219..2807246 - 675 192360877 csd1 CJA_2455 - CRISPR-associated protein, Csd1 family 2394 44.40 -1 2807243..2807947 - 234 192360520 - CJA_2456 - CRISPR-associated protein Cas5, Dvulg subtype 2395 41.69 -1 2807956..2810409 - 817 192360930 cas3 CJA_2457 - CRISPR-associated helicase Cas3 domain protein 2396 52.93 0 2810616..2811452 - 278 192359976 - CJA_2458 - hypothetical protein 2397 51.95 0 2811550..2812011 - 153 192359967 - CJA_2459 - putative TonB-dependent receptor 2398 53.61 0 2811983..2814379 - 798 192360831 - CJA_2460 - EAL domain protein 2399 54.60 0 2814442..2817192 - 916 192361677 - CJA_2461 - probable sensor/response hybrid 2400 52.38 0 2817185..2817772 - 195 192359700 - CJA_2462 - hypothetical protein 2401 53.76 0 2818005..2818856 + 283 192359681 - CJA_2463 - hypothetical protein 2402 52.25 0 2818982..2819092 - 36 192360324 - CJA_2464 - hypothetical protein 2403 52.29 0 2819155..2819634 + 159 192361184 - CJA_2465 - DNA-binding protein HU family 2404 52.96 0 2819709..2820131 - 140 192362240 - CJA_2466 - histidine triad family protein 2405 55.17 0 2820157..2821992 + 611 192359534 proS CJA_2467 - prolyl-tRNA synthetase 2406 49.29 0 2822055..2822405 + 116 192362097 - CJA_2468 - hypothetical protein 2407 53.53 0 2822476..2824881 - 801 192362338 cbp2F CJA_2469 - carbohydrate binding protein, putative, cbp2F 2408 41.48 -1 2824963..2825097 - 44 192360204 - CJA_2470 - hypothetical protein 2409 52.34 0 2825087..2826922 - 611 192361596 xyn10A CJA_2471 - endo-1,4-beta-xylanase, xyn10A 2410 52.27 0 2827080..2829968 - 962 192361914 cel9A CJA_2472 - endo-1,4-beta glucanase, cel9A 2411 52.22 0 2830228..2832324 - 698 192362135 cel6A CJA_2473 - cellobiohydrolase, putative, cel6A 2412 45.37 -1 2832364..2832579 + 71 192359824 - CJA_2474 - hypothetical protein 2413 50.00 0 2832853..2834610 - 585 192361098 man5B CJA_2475 - endo-1, 4-beta mannanase, man5B 2414 48.72 0 2835013..2835129 + 38 192361291 - CJA_2476 - hypothetical protein 2415 56.22 0 2835809..2838862 + 1017 192360902 gly74A CJA_2477 - endo-1,4-beta-glucanase/xyloglucanase, putative, gly74A 2416 52.72 0 2838941..2840539 - 532 192359674 lysS CJA_2478 - lysyl-tRNA synthetase 2417 55.25 0 2840490..2841479 - 329 192358804 prfB CJA_2479 - peptide chain release factor 2 2418 56.47 0 2841845..2843305 + 486 192361333 man26B CJA_2480 - endo-1, 4-beta mannanase, man26B 2419 57.86 +1 2843373..2844212 - 279 192362364 - CJA_2481 - CobQ/CobB/MinD/ParA nucleotide binding domain protein 2420 55.92 0 2844335..2847424 - 1029 192359028 - CJA_2482 - AcrB/AcrD/AcrF family protein 2421 53.81 0 2847496..2848623 - 375 192360021 acrE CJA_2483 - efflux transporter, RND family, MFP subunit 2422 56.17 0 2848912..2849454 + 180 192360703 - CJA_2484 - hydrolase, NUDIX family 2423 53.31 0 2849476..2851002 - 508 192361749 - CJA_2485 - tryptophan halogenase 2424 54.18 0 2851002..2852843 - 613 192359116 - CJA_2486 - hypothetical protein 2425 58.87 +1 2853070..2854929 + 619 192360460 - CJA_2487 - nodulation protein 2426 56.37 0 2854933..2855340 + 135 192359302 - CJA_2488 - hypothetical protein 2427 50.98 0 2855340..2855492 + 50 192362176 - CJA_2489 - hypothetical protein 2428 58.58 +1 2855595..2856731 + 378 192361469 trmU CJA_2490 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 2429 58.65 +1 2856771..2857394 + 207 192358943 - CJA_2491 - hypothetical protein 2430 55.17 0 2857561..2858952 + 463 192361674 purB CJA_2492 - adenylosuccinate lyase 2431 54.66 0 2858987..2860177 + 396 192361020 - CJA_2493 - hypothetical protein 2432 49.89 0 2860483..2860935 + 150 192360439 - CJA_2494 - acetyltransferase, GNAT family 2433 50.30 0 2860949..2861449 + 166 192359594 - CJA_2495 - hypothetical protein 2434 53.49 0 2861483..2861740 - 85 192361889 - CJA_2496 - hypothetical protein 2435 39.80 -2 2862001..2862711 - 236 192361154 - CJA_2497 - hypothetical protein 2436 48.38 0 2864096..2864773 + 225 192361171 - CJA_2499 - putative protein encoding reversible inactivation of extracellular polysaccharide production 2437 52.21 0 2864733..2867180 - 815 192362265 - CJA_2498 - hypothetical protein 2438 43.42 -1 2867250..2867606 - 118 192361057 - CJA_2500 - hypothetical protein 2439 37.53 -2 2867612..2868397 - 261 192360096 - CJA_2501 - hypothetical protein 2440 49.64 0 2868406..2874888 - 2160 192359584 - CJA_2502 - hypothetical protein 2441 33.33 -2 2876411..2876551 + 46 192361744 - CJA_2503 - hypothetical protein 2442 41.24 -2 2877455..2878516 - 353 192361199 - CJA_2504 - hypothetical protein 2443 48.55 0 2878537..2880573 - 678 192360571 - CJA_2505 - hypothetical protein 2444 41.92 -1 2880815..2881909 - 364 192361553 - CJA_2506 - hypothetical protein 2445 46.32 -1 2881927..2883936 - 669 192361405 - CJA_2507 - hypothetical protein 2446 40.93 -2 2884063..2885115 - 350 192362029 - CJA_2508 - hypothetical protein 2447 47.01 0 2885136..2890106 - 1656 192360970 - CJA_2509 - hypothetical protein 2448 54.65 0 2890139..2890396 - 85 192359826 - CJA_2510 - hypothetical protein 2449 42.53 -1 2890573..2891562 + 329 192361824 - CJA_2512 - Integrase core domain protein 2450 41.94 -1 2891504..2891596 - 30 192359526 - CJA_2511 - hypothetical protein 2451 48.89 0 2891767..2892126 - 119 192361194 - CJA_2513 - hypothetical protein 2452 41.61 -1 2892262..2893191 - 309 192360632 - CJA_2514 - hypothetical protein 2453 45.40 -1 2893342..2894352 - 336 192362225 - CJA_2515 - hypothetical protein 2454 48.35 0 2894349..2898176 - 1275 192359323 - CJA_2516 - hypothetical protein 2455 47.55 0 2898245..2904049 - 1934 192359477 - CJA_2517 - Thrombospondin type 3 repeat family 2456 49.47 0 2904186..2905040 - 284 192360509 - CJA_2518 - putative peptidyl-prolyl cis-trans isomerase D 2457 45.26 -1 2905041..2905853 - 270 192361586 - CJA_2519 - peptidyl-prolyl cis-trans isomerase D 2458 50.23 0 2905923..2944154 - 12743 192361760 - CJA_2520 - IPT/TIG domain protein 2459 43.92 -1 2944879..2946210 - 443 192359897 fadL CJA_2521 - Putative fatty acid transport system, membrane protein 2460 47.93 0 2946865..2947227 - 120 192360910 - CJA_2523 - transcription regulator protein 2461 49.19 0 2947208..2947516 - 102 192361986 ihfA CJA_2524 - integration host factor, alpha subunit 2462 55.10 0 2947529..2949922 - 797 192362137 pheT CJA_2525 - phenylalanyl-tRNA synthetase, beta subunit 2463 53.75 0 2950036..2951049 - 337 192362508 pheS CJA_2526 - phenylalanyl-tRNA synthetase, alpha subunit 2464 51.94 0 2951262..2951621 - 119 192360391 rplT CJA_2527 - ribosomal protein L20 2465 52.53 0 2951657..2951854 - 65 192361237 rpmI CJA_2528 - ribosomal protein L35 2466 52.31 0 2951915..2952346 - 143 192359216 infC CJA_2529 - initiation factor 3 2467 56.71 0 2952508..2954436 - 642 192360042 thrS CJA_2530 - threonyl-tRNA synthetase 2468 55.11 0 2954638..2957277 - 879 192361055 - CJA_2531 - putative sulfite reductase, flavoprotein component 2469 58.30 +1 2957362..2958759 - 465 192361636 - CJA_2532 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 2470 55.66 0 2958764..2960698 - 644 192359578 - CJA_2533 - macrolide ABC efflux protein 2471 56.99 0 2960698..2962164 - 488 192360644 - CJA_2534 - efflux transporter, RND family, MFP subunit 2472 52.94 0 2962202..2963767 - 521 192361557 cysJ CJA_2535 - sulfite reductase (NADPH) flavoprotein alpha-component 2473 51.40 0 2963897..2964715 - 272 192362283 - CJA_2536 - hypothetical protein 2474 55.31 0 2964747..2965283 - 178 192361225 - CJA_2537 - hypothetical protein 2475 49.83 0 2965293..2965892 - 199 192359246 - CJA_2538 - plasmolipin 2476 48.70 0 2965983..2968370 - 795 192360590 cirA2 CJA_2539 - exogenous ferric siderophore TonB-dependent receptor 2477 51.41 0 2968698..2969510 + 270 192362301 - CJA_2540 - hypothetical protein 2478 50.84 0 2969551..2970144 - 197 192359576 - CJA_2541 - yhgI protein 2479 53.74 0 2970439..2974182 + 1247 192361071 metH CJA_2542 - methionine synthase 2480 53.41 0 2974267..2974809 + 180 192361193 - CJA_2543 - hypothetical protein 2481 55.61 0 2974849..2975481 + 210 192358874 - CJA_2544 - hypothetical protein 52.09 MEAN 5.42 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0