version 1.0
Cellvibrio japonicus Ueda107, complete genome - 1..4576573 3754 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2340 52.26 0 2744740..2745204 + 154 192362257 - CJA_2402 - RNA methyltransferase, TrmH family, group 2 2341 57.12 0 2745171..2745704 + 177 192361452 - CJA_2403 - flavodoxin 2342 51.81 0 2745770..2746294 + 174 192360690 - CJA_2404 - flavodoxin 2343 60.39 +1 2746291..2748393 + 700 192361512 - CJA_2405 - D-amino acid oxidase family protein 2344 55.00 0 2748453..2748932 + 159 192358917 - CJA_2407 - hypothetical protein 2345 52.61 0 2748929..2749540 - 203 192360598 - CJA_2406 - hypothetical protein 2346 53.81 0 2749574..2750374 + 266 192359238 - CJA_2408 - glutaminyl-peptide cyclotransferase 2347 61.50 +1 2750400..2751212 - 270 192362234 - CJA_2409 - oxidoreductase, short chain dehydrogenase/reductase family 2348 60.15 +1 2751252..2752034 - 260 192360700 - CJA_2410 - enoyl-CoA hydratase/isomerase family protein 2349 56.09 0 2752247..2753986 + 579 192359863 - CJA_2411 - arginyl-tRNA synthetase 2350 50.11 0 2754203..2755102 + 299 192360529 - CJA_2412 - hypothetical protein 2351 47.63 0 2755171..2756205 - 344 192359676 pel3B CJA_2413 - pectate lyase, putative, pel3B 2352 53.57 0 2756717..2758861 + 714 192362023 - CJA_2414 - BNR/Asp-box repeat domain protein 2353 53.28 0 2758885..2760468 + 527 192361296 pae12A CJA_2415 - pectin acetylesterase, putative, pae12A 2354 50.30 0 2760469..2760798 - 109 192359991 - CJA_2416 - hypothetical protein 2355 55.77 0 2760870..2763008 - 712 192359490 - CJA_2417 - ATP-dependent helicase, DinG family 2356 54.93 0 2762998..2764326 - 442 192358932 - CJA_2418 - Acyltransferase domain protein 2357 55.15 0 2764341..2765885 + 514 192359770 - CJA_2420 - Response regulator 2358 56.34 0 2765882..2766898 - 338 192361045 pyrB CJA_2419 - aspartate carbamoyltransferase 2359 57.18 0 2767015..2768184 - 389 192361924 eryB CJA_2421 - NAD binding site:D-amino acid oxidase 2360 58.54 +1 2768305..2769633 - 442 192359919 - CJA_2422 - tRNA and rRNA cytosine-C5-methylase 2361 50.22 0 2769654..2770334 - 226 192362485 - CJA_2423 - hypothetical protein 2362 55.34 0 2770614..2771717 + 367 192361985 gfo CJA_2424 - glucose-fructose oxidoreductase 2363 53.06 0 2771756..2773783 - 675 192360924 uvrB CJA_2425 - excinuclease ABC, B subunit 2364 48.09 0 2774328..2775032 + 234 192361408 - CJA_2427 - PEP-CTERM putative exosortase interaction domain protein 2365 54.88 0 2775010..2776002 - 330 192359272 - CJA_2426 - transcriptional regulator, LysR family 2366 50.17 0 2776067..2776666 + 199 192361706 - CJA_2428 - Flavodoxin-like fold subfamily 2367 55.67 0 2776703..2777557 + 284 192358820 - CJA_2429 - pirin 2368 53.33 0 2777643..2778182 + 179 192359596 - CJA_2430 - NAD(P)H:quinone oxidoreductase 2369 47.22 0 2778295..2779446 - 383 192360429 - CJA_2431 - ISCja2, transposase 2370 52.14 0 2779601..2780068 - 155 192360927 - CJA_2432 - Dps family protein 2371 53.80 0 2780200..2780673 - 157 192361993 - CJA_2433 - acetyltransferase, GNAT family 2372 50.48 0 2780673..2782655 - 660 192359695 - CJA_2434 - von Willebrand factor type A domain protein 2373 54.40 0 2782793..2783281 - 162 192360312 - CJA_2435 - hypothetical protein 2374 53.15 0 2783302..2783745 - 147 192361455 - CJA_2436 - hypothetical protein 2375 48.15 0 2783759..2784055 - 98 192362227 - CJA_2437 - hypothetical protein 2376 54.44 0 2784094..2785230 - 378 192361069 rnd CJA_2438 - ribonuclease D 2377 59.76 +1 2785257..2785850 - 197 192359825 recR CJA_2439 - recombination protein RecR 2378 51.26 0 2785871..2786188 - 105 192358910 - CJA_2440 - conserved hypothetical protein TIGR00103 2379 59.52 +1 2786224..2788266 - 680 192362329 dnaX CJA_2441 - DNA polymerase III, gamma and tau subunits 2380 54.44 0 2788530..2788709 - 59 192360522 - CJA_2442 - hypothetical protein 2381 57.63 +1 2788784..2789281 + 165 192359288 - CJA_2443 - thiol peroxidase 2382 51.99 0 2789506..2790984 + 492 192362241 - CJA_2444 - histidine kinase sensor protein 2383 51.30 0 2790994..2791416 + 140 192361864 - CJA_2445 - two-component response regulator 2384 51.91 0 2791417..2793930 + 837 192361550 - CJA_2447 - MorA 2385 53.64 0 2793920..2794840 - 306 192360549 metR-1 CJA_2446 - transcriptional activator MetR 2386 58.11 +1 2795048..2797477 + 809 192359663 metE CJA_2448 - 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 2387 54.72 0 2798709..2799386 + 225 192362382 - CJA_2449 - hypothetical protein 2388 53.33 0 2800559..2800663 - 34 192360003 - CJA_2450 - hypothetical protein 2389 41.16 -2 2802455..2802748 - 97 192359050 cas2 CJA_2451 - CRISPR-associated protein Cas2 2390 44.15 -1 2802757..2803773 - 338 192359205 cas1 CJA_2452 - CRISPR-associated protein Cas1 2391 44.71 -1 2803770..2804402 - 210 192359223 cas4 CJA_2453 - CRISPR-associated protein Cas4 2392 41.25 -2 2804389..2805222 - 277 192361649 csd2 CJA_2454 - CRISPR-associated protein, Csd2 family 2393 43.20 -1 2805219..2807246 - 675 192360877 csd1 CJA_2455 - CRISPR-associated protein, Csd1 family 2394 44.40 -1 2807243..2807947 - 234 192360520 - CJA_2456 - CRISPR-associated protein Cas5, Dvulg subtype 2395 41.69 -1 2807956..2810409 - 817 192360930 cas3 CJA_2457 - CRISPR-associated helicase Cas3 domain protein 2396 52.93 0 2810616..2811452 - 278 192359976 - CJA_2458 - hypothetical protein 2397 51.95 0 2811550..2812011 - 153 192359967 - CJA_2459 - putative TonB-dependent receptor 2398 53.61 0 2811983..2814379 - 798 192360831 - CJA_2460 - EAL domain protein 2399 54.60 0 2814442..2817192 - 916 192361677 - CJA_2461 - probable sensor/response hybrid 2400 52.38 0 2817185..2817772 - 195 192359700 - CJA_2462 - hypothetical protein 2401 53.76 0 2818005..2818856 + 283 192359681 - CJA_2463 - hypothetical protein 2402 52.25 0 2818982..2819092 - 36 192360324 - CJA_2464 - hypothetical protein 2403 52.29 0 2819155..2819634 + 159 192361184 - CJA_2465 - DNA-binding protein HU family 2404 52.96 0 2819709..2820131 - 140 192362240 - CJA_2466 - histidine triad family protein 2405 55.17 0 2820157..2821992 + 611 192359534 proS CJA_2467 - prolyl-tRNA synthetase 2406 49.29 0 2822055..2822405 + 116 192362097 - CJA_2468 - hypothetical protein 2407 53.53 0 2822476..2824881 - 801 192362338 cbp2F CJA_2469 - carbohydrate binding protein, putative, cbp2F 2408 41.48 -1 2824963..2825097 - 44 192360204 - CJA_2470 - hypothetical protein 2409 52.34 0 2825087..2826922 - 611 192361596 xyn10A CJA_2471 - endo-1,4-beta-xylanase, xyn10A 2410 52.27 0 2827080..2829968 - 962 192361914 cel9A CJA_2472 - endo-1,4-beta glucanase, cel9A 2411 52.22 0 2830228..2832324 - 698 192362135 cel6A CJA_2473 - cellobiohydrolase, putative, cel6A 2412 45.37 -1 2832364..2832579 + 71 192359824 - CJA_2474 - hypothetical protein 2413 50.00 0 2832853..2834610 - 585 192361098 man5B CJA_2475 - endo-1, 4-beta mannanase, man5B 2414 48.72 0 2835013..2835129 + 38 192361291 - CJA_2476 - hypothetical protein 2415 56.22 0 2835809..2838862 + 1017 192360902 gly74A CJA_2477 - endo-1,4-beta-glucanase/xyloglucanase, putative, gly74A 2416 52.72 0 2838941..2840539 - 532 192359674 lysS CJA_2478 - lysyl-tRNA synthetase 2417 55.25 0 2840490..2841479 - 329 192358804 prfB CJA_2479 - peptide chain release factor 2 2418 56.47 0 2841845..2843305 + 486 192361333 man26B CJA_2480 - endo-1, 4-beta mannanase, man26B 2419 57.86 +1 2843373..2844212 - 279 192362364 - CJA_2481 - CobQ/CobB/MinD/ParA nucleotide binding domain protein 2420 55.92 0 2844335..2847424 - 1029 192359028 - CJA_2482 - AcrB/AcrD/AcrF family protein 2421 53.81 0 2847496..2848623 - 375 192360021 acrE CJA_2483 - efflux transporter, RND family, MFP subunit 2422 56.17 0 2848912..2849454 + 180 192360703 - CJA_2484 - hydrolase, NUDIX family 2423 53.31 0 2849476..2851002 - 508 192361749 - CJA_2485 - tryptophan halogenase 2424 54.18 0 2851002..2852843 - 613 192359116 - CJA_2486 - hypothetical protein 2425 58.87 +1 2853070..2854929 + 619 192360460 - CJA_2487 - nodulation protein 2426 56.37 0 2854933..2855340 + 135 192359302 - CJA_2488 - hypothetical protein 2427 50.98 0 2855340..2855492 + 50 192362176 - CJA_2489 - hypothetical protein 2428 58.58 +1 2855595..2856731 + 378 192361469 trmU CJA_2490 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 2429 58.65 +1 2856771..2857394 + 207 192358943 - CJA_2491 - hypothetical protein 2430 55.17 0 2857561..2858952 + 463 192361674 purB CJA_2492 - adenylosuccinate lyase 2431 54.66 0 2858987..2860177 + 396 192361020 - CJA_2493 - hypothetical protein 2432 49.89 0 2860483..2860935 + 150 192360439 - CJA_2494 - acetyltransferase, GNAT family 2433 50.30 0 2860949..2861449 + 166 192359594 - CJA_2495 - hypothetical protein 2434 53.49 0 2861483..2861740 - 85 192361889 - CJA_2496 - hypothetical protein 2435 39.80 -2 2862001..2862711 - 236 192361154 - CJA_2497 - hypothetical protein 2436 48.38 0 2864096..2864773 + 225 192361171 - CJA_2499 - putative protein encoding reversible inactivation of extracellular polysaccharide production 2437 52.21 0 2864733..2867180 - 815 192362265 - CJA_2498 - hypothetical protein 2438 43.42 -1 2867250..2867606 - 118 192361057 - CJA_2500 - hypothetical protein 2439 37.53 -2 2867612..2868397 - 261 192360096 - CJA_2501 - hypothetical protein 52.09 MEAN 5.42 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0