version 1.0
Cellvibrio japonicus Ueda107, complete genome - 1..4576573 3754 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1944 54.67 0 2314211..2316895 + 894 192360633 acnB CJA_2001 - aconitate hydratase 2 1945 45.55 -1 2317050..2318915 - 621 192360723 - CJA_2002 - putative peptidyl-prolyl cis-trans isomerase D 1946 49.45 0 2319146..2319418 - 90 192361790 - CJA_2003 - DNA-binding protein HU superfamily 1947 47.35 0 2319663..2322080 - 805 192359285 lon CJA_2004 - ATP-dependent protease La 1948 45.70 -1 2322219..2323520 - 433 192361200 clpX CJA_2005 - ATP-dependent Clp protease, ATP-binding subunit ClpX 1949 46.67 -1 2323645..2324289 - 214 192360657 clpP CJA_2006 - ATP-dependent Clp protease, proteolytic subunit ClpP 1950 48.63 0 2324459..2325772 - 437 192359587 tig CJA_2007 - trigger factor 1951 49.35 0 2326073..2326609 - 178 192359147 - CJA_2009 - hypothetical protein 1952 52.40 0 2326632..2329253 - 873 192360805 - CJA_2010 - putative DNA topoisomerase I 1953 52.40 0 2329608..2330315 + 235 192361380 - CJA_2013 - hypothetical protein 1954 55.21 0 2329614..2329709 - 31 192359518 - CJA_2011 - hypothetical protein 1955 53.85 0 2330302..2330847 - 181 192362453 - CJA_2012 - hypothetical protein 1956 56.36 0 2331001..2331456 + 151 192361362 - CJA_2014 - universal stress protein family 1957 53.68 0 2331460..2333361 - 633 192361001 - CJA_2015 - ABC transporter, ATP-binding protein 1958 53.33 0 2333451..2333615 - 54 192362069 - CJA_2016 - hypothetical protein 1959 54.19 0 2333644..2335671 + 675 192358879 lmt23A CJA_2017 - lytic murein transglycosylase, putative, lmt23A 1960 47.22 0 2335755..2336906 - 383 192359944 - CJA_2018 - ISCja2, transposase 1961 43.17 -1 2337048..2337413 - 121 192359855 - CJA_2019 - hypothetical protein 1962 48.96 0 2337486..2338400 - 304 192362347 - CJA_2020 - peptidyl-prolyl cis-trans isomerase, cyclophilin-type domain protein 1963 53.58 0 2338442..2339419 - 325 192359409 - CJA_2021 - HPP family 1964 47.92 0 2339456..2339551 + 31 192360192 - CJA_2022 - hypothetical protein 1965 56.81 0 2339614..2339826 + 70 192359964 - CJA_2023 - hypothetical protein 1966 54.41 0 2339798..2342089 + 763 192361277 - CJA_2024 - copper-translocating P-type ATPase 1967 53.01 0 2342103..2342600 + 165 192360943 hmrR2 CJA_2025 - MerR-family transcriptional regulator 1968 50.51 0 2343124..2344485 + 453 192361982 - CJA_2026 - outer membrane efflux protein 1969 54.44 0 2344478..2345884 + 468 192359541 - CJA_2027 - multicopper oxidase 1970 51.16 0 2345963..2346091 - 42 192360608 - CJA_2028 - hypothetical protein 1971 45.34 -1 2346119..2347609 - 496 192359736 - CJA_2029 - possible msrA, pms peptide methionine sulfoxide reductase 1972 41.77 -1 2347602..2347850 + 82 192360809 narB CJA_2030 - assimilatory nitrate reductase 1973 53.64 0 2347907..2349940 + 677 192361896 prrA CJA_2031 - TonB-dependent outer membrane receptor 1974 54.52 0 2349950..2351233 + 427 192359195 - CJA_2032 - putative regulatory lipoprotein 1975 53.13 0 2351230..2352588 + 452 192360638 - CJA_2033 - Predicted thiol oxidoreductase 1976 48.15 0 2352635..2352796 + 53 192361244 - CJA_2034 - hypothetical protein 1977 50.35 0 2352802..2354217 - 471 192361602 - CJA_2035 - putative lipoprotein 1978 53.30 0 2354217..2356961 - 914 192359989 - CJA_2036 - hypothetical protein 1979 47.21 0 2357001..2357663 - 220 192359391 - CJA_2037 - hypothetical protein 1980 55.30 0 2357811..2359226 + 471 192361619 pabB CJA_2038 - para-aminobenzoate synthase, component I 1981 54.85 0 2359290..2360042 + 250 192360836 - CJA_2039 - carboxymethylenebutenolidase 1982 53.27 0 2360120..2362060 - 646 192360162 pel10B CJA_2040 - pectate lyase, putative, pel10B 1983 49.51 0 2362251..2362868 - 205 192361644 - CJA_2041 - phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein 1984 52.07 0 2363078..2363803 + 241 192362414 cysH CJA_2042 - 3'-phosphoadenylylsulfate reductase 1985 54.82 0 2363816..2364448 - 210 192361568 - CJA_2043 - protein-methionine-S-oxide reductase 1986 48.77 0 2364514..2365608 - 364 192359025 - CJA_2044 - possible protease SohB 1987 48.62 0 2365643..2366296 - 217 192362022 - CJA_2045 - hypothetical protein 1988 53.29 0 2366346..2367227 - 293 192362038 - CJA_2046 - hydrolase, NUDIX family 1989 50.09 0 2367257..2368963 - 568 192360329 - CJA_2047 - PA1822-like protein 1990 53.36 0 2369200..2369913 - 237 192359256 dnaQ CJA_2048 - DNA polymerase III, epsilon subunit 1991 55.40 0 2369988..2370422 - 144 192361631 rnhA CJA_2049 - RNase H 1992 54.53 0 2370397..2371302 - 301 192360820 - CJA_2050 - Generic methyl-transferase 1993 48.96 0 2371390..2371485 - 31 192359473 - CJA_2051 - hypothetical protein 1994 54.25 0 2371608..2372243 + 211 192362517 - CJA_2052 - hydroxyacylglutathione hydrolase 1995 51.99 0 2372453..2374012 + 519 192361254 lmt23B CJA_2053 - lytic murein transglycosylase, putative, lmt23B 1996 51.67 0 2374082..2375695 - 537 192362004 - CJA_2054 - peptide ABC transporter, ATP-binding protein 1997 48.19 0 2375700..2376581 - 293 192359661 oppC CJA_2055 - oligopeptide ABC transporter, permease protein 1998 50.64 0 2376581..2377516 - 311 192360499 oppB CJA_2056 - oligopeptide transport system permease protein oppB 1999 47.29 0 2377528..2378265 - 245 192361776 - CJA_2057 - oligopeptide ABC transporter periplasmic oligopeptide-binding protein 2000 49.56 0 2378235..2379134 - 299 192358787 - CJA_2058 - oligopeptide ABC transporter periplasmic oligopeptide-binding protein 2001 46.87 0 2379215..2381305 - 696 192360108 - CJA_2059 - Peptidase family M3 2002 49.84 0 2381678..2382295 + 205 192360904 - CJA_2060 - hypothetical protein 2003 47.47 0 2382309..2383277 + 322 192362269 - CJA_2061 - sensory box/GGDEF family protein 2004 40.74 -2 2383367..2383501 - 44 192359682 - CJA_2062 - hypothetical protein 2005 48.45 0 2383574..2384122 - 182 192360455 uvs015 CJA_2063 - Uvs015 2006 51.41 0 2384115..2386133 - 672 192360395 ccmF CJA_2064 - cytochrome c-type biogenesis protein CcmF 2007 51.18 0 2386123..2386587 - 154 192361384 - CJA_2065 - CycJ 2008 52.82 0 2386653..2386847 - 64 192362454 ccmD CJA_2066 - heme exporter protein CcmD 2009 52.55 0 2386851..2387615 - 254 192359499 - CJA_2067 - heme exporter protein C 2010 56.70 0 2387687..2388388 - 233 192358904 ccmB CJA_2068 - heme exporter protein CcmB 2011 54.95 0 2388388..2389053 - 221 192359720 ccmA CJA_2069 - heme ABC exporter, ATP-binding protein CcmA 2012 52.03 0 2389073..2391046 + 657 192361051 - CJA_2070 - hypothetical protein 2013 50.17 0 2391059..2391361 + 100 192361951 - CJA_2071 - FlhB domain protein 2014 50.49 0 2391383..2393917 - 844 192359360 - CJA_2072 - sensory box protein 2015 56.22 0 2393975..2395084 - 369 192360215 ald CJA_2073 - alanine dehydrogenase 2016 55.56 0 2395381..2395893 + 170 192360863 - CJA_2074 - hypothetical protein 2017 53.14 0 2395916..2396824 - 302 192359196 - CJA_2075 - hypothetical protein 2018 51.52 0 2396912..2397109 + 65 192360031 - CJA_2076 - hypothetical protein 2019 55.05 0 2397233..2398024 + 263 192361412 - CJA_2077 - hypothetical protein 2020 54.16 0 2398177..2399751 + 524 192362233 aer-2 CJA_2078 - aerotaxis receptor Aer-2 2021 52.75 0 2399827..2401155 + 442 192359441 bioA CJA_2079 - adenosylmethionine-8-amino-7-oxononanoate transaminase 2022 52.58 0 2401219..2402226 - 335 192360220 trpS CJA_2080 - tryptophanyl-tRNA synthetase 2023 52.23 0 2402317..2403348 - 343 192361025 - CJA_2081 - cyclic nucleotide-binding domain protein 2024 53.44 0 2403544..2404881 - 445 192362291 - CJA_2082 - aminopeptidase, M18 family 2025 54.77 0 2404938..2405702 - 254 192361622 - CJA_2083 - glycoprotease family protein 2026 51.22 0 2405759..2406412 - 217 192359071 adk CJA_2084 - adenylate kinase 2027 49.68 0 2406764..2407234 + 156 192362390 - CJA_2085 - transcriptional regulator, AsnC family 2028 52.69 0 2407356..2408993 - 545 192360693 - CJA_2086 - methyl-accepting chemotaxis protein 2029 52.56 0 2409059..2410525 - 488 192360334 gabD CJA_2087 - succinate-semialdehyde dehydrogenase 2030 51.10 0 2410529..2412262 - 577 192361826 - CJA_2088 - Cell volume regulation protein A homolog 2031 50.73 0 2412444..2414438 + 664 192359348 rnb CJA_2089 - exoribonuclease II 2032 47.96 0 2414463..2414927 + 154 192359197 - CJA_2090 - Family of unknown function (DUF589) superfamily 2033 33.33 -2 2414995..2415582 - 195 192361401 - CJA_2091 - hypothetical protein 2034 44.74 -1 2415572..2416816 - 414 192362239 - CJA_2092 - hypothetical protein 2035 47.69 0 2417351..2419405 - 684 192359162 - CJA_2093 - Rhs family protein 2036 52.38 0 2419478..2419792 + 104 192361898 - CJA_2094 - IS66 family element, Orf1 protein 2037 46.72 0 2419789..2420139 + 116 192361289 - CJA_2095 - IS66 family element, Orf2 protein 2038 46.81 0 2420172..2421737 + 521 192362471 - CJA_2097 - IS66 family element, transposase 2039 46.38 -1 2421591..2422640 - 349 192360639 - CJA_2096 - RHS Repeat family 2040 46.40 -1 2422576..2424159 - 527 192361425 - CJA_2098 - IS66 family element, transposase 2041 45.87 -1 2424198..2424548 - 116 192360774 - CJA_2099 - IS66 family element, Orf2 protein 2042 51.11 0 2424545..2424859 - 104 192360171 - CJA_2100 - IS66 family element, Orf1 protein 2043 42.66 -1 2424928..2428335 - 1135 192360373 - CJA_2101 - putative cytoplasmic membrane protein 52.09 MEAN 5.42 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0