version 1.0
Cellvibrio japonicus Ueda107, complete genome - 1..4576573 3754 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 151 58.06 +1 204211..205140 - 309 192362449 ubiA CJA_0151 - 4-hydroxybenzoate polyprenyl transferase 152 62.75 +1 205161..205772 - 203 192358861 ubiC CJA_0152 - chorismate--pyruvate lyase 153 54.35 0 205964..206239 + 91 192359929 hup CJA_0153 - DNA-binding protein HU 154 52.19 0 206285..207652 + 455 192358823 - CJA_0154 - proton/glutamate symporter 155 55.22 0 207682..208380 - 232 192359887 - CJA_0155 - hypothetical protein 156 54.21 0 208615..209208 + 197 192360865 hisB CJA_0156 - imidazoleglycerol-phosphate dehydratase 157 54.99 0 209230..209880 + 216 192361662 hisH CJA_0157 - imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 158 56.83 0 209938..210669 + 243 192359699 hisA CJA_0158 - phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 159 55.56 0 210683..211456 + 257 192360508 hisF CJA_0159 - imidazoleglycerol phosphate synthase, cyclase subunit 160 52.30 0 211551..212267 - 238 192359846 - CJA_0160 - hypothetical protein 161 51.78 0 212719..213450 + 243 192360773 - CJA_0161 - macrophage infectivity potentiator 162 52.14 0 213613..214080 - 155 192362153 algQ CJA_0162 - transcriptional regulator AlgQ 163 57.14 0 214176..214658 - 160 192359080 dsbH CJA_0163 - protein-disulfide reductase 164 51.07 0 214932..215399 + 155 192360424 - CJA_0165 - Flagellar basal body-associated protein FliL 165 55.56 0 215396..217006 - 536 192361486 gshA CJA_0164 - glutamate--cysteine ligase 166 51.26 0 217091..217408 - 105 192362486 - CJA_0166 - hypothetical protein 167 51.96 0 217441..218718 - 425 192361647 - CJA_0167 - transporter, small conductance mechanosensitive ion channel (MscS) family 168 49.56 0 218879..219673 - 264 192361656 - CJA_0168 - Short-chain alcohol dehydrogenase family protein 169 48.10 0 219686..220525 - 279 192360849 - CJA_0169 - 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase 170 49.49 0 220653..223214 - 853 192360542 urh105A CJA_0170 - unsaturated rhamnogalacturonyl hydrolase, putative, urh105A 171 45.10 -1 223310..226021 - 903 192359268 - CJA_0171 - TonB-dependent receptor 172 54.22 0 226264..227733 - 489 192362237 pga28A CJA_0172 - polygalacturonase, putative, pga28A 173 37.78 -2 227896..228030 - 44 192361905 - CJA_0173 - hypothetical protein 174 52.07 0 228491..230011 + 506 192359350 - CJA_0174 - dehydratase 175 55.30 0 230198..231358 + 386 192362509 - CJA_0175 - proton-translocating nicotinamide nucleotide transhydrogenase subunit PntAA 176 47.37 0 231373..231657 + 94 192361450 pntA CJA_0176 - NAD(P) transhydrogenase, alpha subunit 177 52.85 0 231673..233076 + 467 192359751 - CJA_0177 - proton-translocating nicotinamide nucleotide transhydrogenase subunit PntB 178 51.63 0 233154..233552 + 132 192359092 - CJA_0178 - glyoxylase family protein 179 53.99 0 233604..234692 - 362 192360178 kdgK CJA_0179 - ketodeoxygluconokinase 180 50.57 0 234806..236284 + 492 192360295 - CJA_0180 - D-mannonate oxidoreductase 181 52.68 0 236371..237471 + 366 192360184 pme8C CJA_0181 - pectin methylesterase, putative, pme8C 182 54.42 0 237624..239966 + 780 192359031 - CJA_0182 - putative methyl-accepting chemotaxis protein 183 56.28 0 239974..240945 - 323 192361813 fbp CJA_0183 - fructose-1,6-bisphosphatase 184 52.69 0 240961..242040 - 359 192359871 fbaA CJA_0184 - fructose-bisphosphate aldolase, class II 185 58.24 +1 242146..242916 - 256 192358825 - CJA_0185 - triosephosphate isomerase 186 52.26 0 242903..243145 - 80 192362162 - CJA_0186 - hypothetical protein 187 60.28 +1 243444..245024 - 526 192359424 - CJA_0187 - putative GGDEF domain protein 188 58.27 +1 245027..245419 - 130 192360280 - CJA_0188 - hypothetical protein 189 56.19 0 245455..246714 - 419 192361978 - CJA_0189 - hypothetical protein 190 58.15 +1 246845..247678 - 277 192359842 - CJA_0190 - response regulator 191 55.98 0 247757..248533 - 258 192361610 - CJA_0191 - hypothetical protein 192 58.13 +1 248585..248959 - 124 192362435 - CJA_0192 - hypothetical protein 193 53.06 0 248963..249109 + 48 192359529 - CJA_0193 - hypothetical protein 194 59.10 +1 249136..250404 + 422 192359214 - CJA_0194 - Peptidase family M48 family 195 58.65 +1 250575..251123 + 182 192360056 - CJA_0195 - TRAP transporter, DctQ-like membrane protein family 196 55.75 0 251117..252499 + 460 192361832 - CJA_0196 - TRAP transporter, DctM subunit 197 57.32 0 252577..252972 + 131 192360761 - CJA_0197 - acyl-CoA hydrolase 198 52.88 0 253164..253823 + 219 192359365 - CJA_0198 - Cytochrome b561 homolog 2 199 49.74 0 253895..254479 + 194 192360528 ycel3 CJA_0199 - yceI-like protein, ycel3 200 47.77 0 254812..255102 + 96 192361363 - CJA_0200 - hypothetical protein 201 46.12 -1 255099..256349 + 416 192358854 - CJA_0201 - hypothetical protein 202 59.77 +1 256425..257294 - 289 192359697 - CJA_0202 - conserved hypothetical protein TIGR00255 203 60.56 +1 257434..258153 + 239 192362066 rph CJA_0203 - ribonuclease PH 204 56.97 0 258427..261036 + 869 192361004 cel3A CJA_0204 - glucan 1,4-beta-glucosidase cel3A 205 53.36 0 261130..261978 - 282 192359927 metF CJA_0205 - 5,10-methylenetetrahydrofolate reductase 206 54.28 0 262059..263447 - 462 192360318 ahcY CJA_0206 - adenosylhomocysteinase 207 57.58 +1 263558..264712 - 384 192358797 metK CJA_0207 - S-adenosylmethionine synthetase 208 58.67 +1 264784..265821 - 345 192362087 - CJA_0208 - transcriptional regulator, ArsR family 209 60.66 +1 265919..266101 - 60 192358839 - CJA_0209 - hypothetical protein 210 57.09 0 266158..268161 + 667 192361713 tkt CJA_0210 - transketolase 211 55.16 0 268299..269471 + 390 192360860 pgk CJA_0211 - phosphoglycerate kinase 212 56.11 0 269907..271052 + 381 192361487 pel3A CJA_0212 - pectate lyase, putative, pel3A 213 51.39 0 271358..271501 - 47 192360650 - CJA_0213 - hypothetical protein 214 59.23 +1 271521..275018 + 1165 192359354 glu81A CJA_0214 - glucan endo-1,3-beta-glucanase, putative, glu81A 215 49.04 0 275369..278323 + 984 192361878 - CJA_0215 - TonB-dependent receptor 216 44.67 -1 278418..279140 + 240 192361733 - CJA_0216 - hypothetical protein 217 50.39 0 279153..280166 + 337 192360795 - CJA_0217 - Pass1-related protein 218 48.34 0 280203..281681 + 492 192360438 - CJA_0218 - tryptophan halogenase 219 50.33 0 281757..282215 - 152 192361301 - CJA_0219 - hypothetical protein 220 55.24 0 281932..282036 + 34 192359968 - CJA_0220 - hypothetical protein 221 47.91 0 282357..283049 - 230 192359593 - CJA_0221 - hypothetical protein 222 51.23 0 283112..283273 + 53 192358992 - CJA_0222 - hypothetical protein 223 55.12 0 283555..286101 + 848 192361998 cel3C CJA_0223 - glucan 1,4-beta-glucosidase, putative, cel3C 224 51.42 0 286172..287194 + 340 192360955 glu16B CJA_0224 - beta glucanase, putative, glu16B 225 51.55 0 287247..290024 + 925 192360365 glu16A CJA_0225 - beta glucanase, putative, glu16A 226 54.34 0 290265..291440 - 391 192359115 - CJA_0226 - FAD binding domain protein 227 52.90 0 291425..293479 - 684 192362055 - CJA_0227 - hypothetical protein 228 49.51 0 293497..294819 - 440 192360741 - CJA_0228 - hypothetical protein 229 50.90 0 295153..296313 - 386 192359783 - CJA_0229 - transcriptional regulator, AraC family 230 59.02 +1 296489..297469 + 326 192359056 - CJA_0230 - hydrolase, alpha/beta fold family 231 56.15 0 297542..298501 + 319 192362404 - CJA_0231 - Predicted membrane protein 232 58.37 +1 298589..299818 - 409 192360714 - CJA_0232 - D-3-phosphoglycerate dehydrogenase 233 57.33 0 300067..301308 + 413 192360214 - CJA_0233 - putative transmembrane efflux protein 234 60.03 +1 301360..302082 - 240 192359618 - CJA_0234 - putative lipoprotein 235 60.28 +1 302102..302821 - 239 192359032 - CJA_0235 - hypothetical protein 236 58.25 +1 302983..304242 + 419 192360166 man26C CJA_0236 - endo-1, 4-beta mannanase, putative, man26C 237 56.77 0 304522..305430 + 302 192360577 - CJA_0237 - PEP-CTERM putative exosortase interaction domain protein 238 57.96 +1 305486..306163 - 225 192361815 rpiA CJA_0238 - ribose 5-phosphate isomerase A 239 56.45 0 306162..307805 + 547 192361598 ilvA CJA_0239 - threonine ammonia-lyase, biosynthetic 240 58.36 +1 307862..308860 - 332 192360261 - CJA_0240 - Transcriptional regulator 241 52.30 0 309066..310931 + 621 192359748 - CJA_0241 - Na+/glucose symporter 242 53.55 0 311104..312285 + 393 192362426 unk1 CJA_0242 - hypothetical protein 243 52.32 0 312288..313535 + 415 192361142 unk2 CJA_0243 - Unk2 244 55.27 0 313546..314949 + 467 192359740 man5D CJA_0244 - putative 1,4-beta mannosidase man5D 245 33.33 -2 315023..315127 - 34 192359427 - CJA_0245 - hypothetical protein 246 51.93 0 315172..316386 + 404 192361444 aga27A CJA_0246 - putative alpha-galactosidase, aga27A 247 54.79 0 316462..317766 - 434 192361979 plt103B CJA_0247 - peptidoglycan lytic transglycosylase, putative, plt103B 248 53.25 0 319437..319682 - 81 192359659 - CJA_0248 - Modulator of Rho-dependent transcription termination (ROF) superfamily 249 53.31 0 319702..320442 - 246 192360543 algR CJA_0249 - alginate biosynthesis regulatory protein AlgR 250 56.67 0 320449..321468 - 339 192362438 algZ CJA_0250 - AlgZ 52.09 MEAN 5.42 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0