version 1.0
Cellvibrio japonicus Ueda107, complete genome - 1..4576573 3754 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1902 49.94 0 2273036..2273932 - 298 192359104 - CJA_1954 - hydrolase, alpha/beta fold family 1903 54.49 0 2273975..2274442 - 155 192360147 sixA CJA_1955 - phosphohistidine phosphatase SixA 1904 45.58 -1 2274442..2274792 - 116 192361211 - CJA_1956 - possible lipase 1905 50.64 0 2274822..2275844 - 340 192362298 - CJA_1957 - NAD-dependent glycerol-3-phosphate dehydrogenase 1906 49.80 0 2276380..2276877 - 165 192359574 - CJA_1958 - Potential flavoprotein oxygenase, DIM6/NTAB family 1907 51.90 0 2277607..2279712 + 701 192361735 - CJA_1963 - outer membrane iron(III) dicitrate receptor 1908 55.52 0 2279882..2280724 + 280 192358944 folD CJA_1964 - bifunctional protein 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase 1909 55.56 0 2280759..2281523 + 254 192359752 - CJA_1965 - RNA pseudouridine synthase family protein 1910 53.48 0 2281520..2282224 + 234 192361094 rsuA1 CJA_1966 - ribosomal small subunit pseudouridine synthase A 1911 54.00 0 2282205..2283278 + 357 192359393 - CJA_1967 - putative ribosomal RNA small subunit methyltransferase C 1912 46.81 0 2283788..2284069 + 93 192360240 - CJA_1969 - hypothetical protein 1913 51.71 0 2284173..2285750 - 525 192359387 - CJA_1970 - hydrolase, alpha/beta fold family domain protein 1914 48.85 0 2285777..2286820 - 347 192360612 - CJA_1971 - pseudouridine synthase Rlu family protein 1915 54.44 0 2286851..2287480 + 209 192359182 lacA CJA_1972 - acetyltransferase, CysE/LacA/LpxA/NodL family 1916 49.87 0 2287514..2289055 + 513 192359733 - CJA_1973 - Ferredoxin-dependent glutamate synthase 1917 47.11 0 2289083..2289670 + 195 192359652 - CJA_1974 - hypothetical protein 1918 51.96 0 2289905..2290516 + 203 192362199 - CJA_1975 - Uncharacterized protein family UPF0016 family 1919 46.90 0 2290610..2291029 - 139 192361258 - CJA_1976 - HIT-like protein 1920 50.59 0 2291056..2291901 - 281 192359951 mal77A CJA_1977 - 4-alpha-glucanotransferase, putative, mal77A 1921 55.48 0 2291990..2292445 + 151 192359163 - CJA_1978 - YaiI/YqxD family protein superfamily 1922 53.57 0 2292809..2294686 + 625 192361806 deaD-1 CJA_1979 - ATP-dependent RNA helicase DeaD 1923 45.04 -1 2294762..2295043 - 93 192362428 - CJA_1980 - hypothetical protein 1924 55.11 0 2295057..2297990 - 977 192361560 hepA CJA_1981 - RNA polymerase-associated protein HepA 1925 54.95 0 2298176..2299105 + 309 192360241 - CJA_1982 - aldose 1-epimerase family protein 1926 53.56 0 2299174..2300157 - 327 192359373 mdh CJA_1983 - malate dehydrogenase 1927 52.01 0 2300487..2302274 + 595 192360753 - CJA_1985 - sensory box/GGDEF family protein 1928 47.44 0 2302271..2302894 - 207 192360191 dut CJA_1984 - dUTPase 1929 53.36 0 2302933..2303736 - 267 192359359 - CJA_1986 - deoxyribonuclease, TatD family 1930 50.33 0 2303741..2304040 - 99 192358962 - CJA_1987 - hypothetical protein 1931 52.54 0 2304061..2304414 - 117 192361973 pilZ CJA_1988 - type 4 fimbrial biogenesis protein PilZ 1932 59.76 +1 2304546..2305559 - 337 192360743 holB CJA_1989 - DNA polymerase III, delta prime subunit 1933 53.15 0 2305563..2305673 - 36 192360430 - CJA_1990 - hypothetical protein 1934 55.87 0 2305658..2306296 + 212 192358936 - CJA_1991 - ribosomal large subunit pseudouridine synthase A 1935 53.94 0 2306477..2307631 + 384 192361643 - CJA_1992 - putative traF 1936 55.45 0 2307713..2308354 - 213 192362258 tmk CJA_1993 - thymidylate kinase 1937 47.76 0 2308439..2308930 + 163 192360620 ppiB-1 CJA_1994 - peptidyl-prolyl cis-trans isomerase B 1938 55.60 0 2308934..2309656 + 240 192361027 lpxH CJA_1995 - UDP-2,3-diacylglucosamine hydrolase 1939 48.42 0 2309673..2310083 - 136 192361902 - CJA_1996 - hypothetical protein 1940 51.89 0 2310150..2310758 - 202 192359353 miaE CJA_1997 - tRNA-(MS[2]IO[6]A)-hydroxylase subfamily 1941 47.62 0 2310770..2311252 - 160 192361092 - CJA_1998 - hypothetical protein 1942 51.72 0 2311259..2312890 - 543 192361391 tre37B CJA_1999 - trehalase, putative, tre37B 1943 52.96 0 2312901..2313929 - 342 192362307 gnl CJA_2000 - gluconolactonase precursor 1944 54.67 0 2314211..2316895 + 894 192360633 acnB CJA_2001 - aconitate hydratase 2 1945 45.55 -1 2317050..2318915 - 621 192360723 - CJA_2002 - putative peptidyl-prolyl cis-trans isomerase D 1946 49.45 0 2319146..2319418 - 90 192361790 - CJA_2003 - DNA-binding protein HU superfamily 1947 47.35 0 2319663..2322080 - 805 192359285 lon CJA_2004 - ATP-dependent protease La 1948 45.70 -1 2322219..2323520 - 433 192361200 clpX CJA_2005 - ATP-dependent Clp protease, ATP-binding subunit ClpX 1949 46.67 -1 2323645..2324289 - 214 192360657 clpP CJA_2006 - ATP-dependent Clp protease, proteolytic subunit ClpP 1950 48.63 0 2324459..2325772 - 437 192359587 tig CJA_2007 - trigger factor 1951 49.35 0 2326073..2326609 - 178 192359147 - CJA_2009 - hypothetical protein 1952 52.40 0 2326632..2329253 - 873 192360805 - CJA_2010 - putative DNA topoisomerase I 1953 52.40 0 2329608..2330315 + 235 192361380 - CJA_2013 - hypothetical protein 1954 55.21 0 2329614..2329709 - 31 192359518 - CJA_2011 - hypothetical protein 1955 53.85 0 2330302..2330847 - 181 192362453 - CJA_2012 - hypothetical protein 1956 56.36 0 2331001..2331456 + 151 192361362 - CJA_2014 - universal stress protein family 1957 53.68 0 2331460..2333361 - 633 192361001 - CJA_2015 - ABC transporter, ATP-binding protein 1958 53.33 0 2333451..2333615 - 54 192362069 - CJA_2016 - hypothetical protein 1959 54.19 0 2333644..2335671 + 675 192358879 lmt23A CJA_2017 - lytic murein transglycosylase, putative, lmt23A 1960 47.22 0 2335755..2336906 - 383 192359944 - CJA_2018 - ISCja2, transposase 1961 43.17 -1 2337048..2337413 - 121 192359855 - CJA_2019 - hypothetical protein 1962 48.96 0 2337486..2338400 - 304 192362347 - CJA_2020 - peptidyl-prolyl cis-trans isomerase, cyclophilin-type domain protein 1963 53.58 0 2338442..2339419 - 325 192359409 - CJA_2021 - HPP family 1964 47.92 0 2339456..2339551 + 31 192360192 - CJA_2022 - hypothetical protein 1965 56.81 0 2339614..2339826 + 70 192359964 - CJA_2023 - hypothetical protein 1966 54.41 0 2339798..2342089 + 763 192361277 - CJA_2024 - copper-translocating P-type ATPase 1967 53.01 0 2342103..2342600 + 165 192360943 hmrR2 CJA_2025 - MerR-family transcriptional regulator 1968 50.51 0 2343124..2344485 + 453 192361982 - CJA_2026 - outer membrane efflux protein 1969 54.44 0 2344478..2345884 + 468 192359541 - CJA_2027 - multicopper oxidase 1970 51.16 0 2345963..2346091 - 42 192360608 - CJA_2028 - hypothetical protein 1971 45.34 -1 2346119..2347609 - 496 192359736 - CJA_2029 - possible msrA, pms peptide methionine sulfoxide reductase 1972 41.77 -1 2347602..2347850 + 82 192360809 narB CJA_2030 - assimilatory nitrate reductase 1973 53.64 0 2347907..2349940 + 677 192361896 prrA CJA_2031 - TonB-dependent outer membrane receptor 1974 54.52 0 2349950..2351233 + 427 192359195 - CJA_2032 - putative regulatory lipoprotein 1975 53.13 0 2351230..2352588 + 452 192360638 - CJA_2033 - Predicted thiol oxidoreductase 1976 48.15 0 2352635..2352796 + 53 192361244 - CJA_2034 - hypothetical protein 1977 50.35 0 2352802..2354217 - 471 192361602 - CJA_2035 - putative lipoprotein 1978 53.30 0 2354217..2356961 - 914 192359989 - CJA_2036 - hypothetical protein 1979 47.21 0 2357001..2357663 - 220 192359391 - CJA_2037 - hypothetical protein 1980 55.30 0 2357811..2359226 + 471 192361619 pabB CJA_2038 - para-aminobenzoate synthase, component I 1981 54.85 0 2359290..2360042 + 250 192360836 - CJA_2039 - carboxymethylenebutenolidase 1982 53.27 0 2360120..2362060 - 646 192360162 pel10B CJA_2040 - pectate lyase, putative, pel10B 1983 49.51 0 2362251..2362868 - 205 192361644 - CJA_2041 - phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein 1984 52.07 0 2363078..2363803 + 241 192362414 cysH CJA_2042 - 3'-phosphoadenylylsulfate reductase 1985 54.82 0 2363816..2364448 - 210 192361568 - CJA_2043 - protein-methionine-S-oxide reductase 1986 48.77 0 2364514..2365608 - 364 192359025 - CJA_2044 - possible protease SohB 1987 48.62 0 2365643..2366296 - 217 192362022 - CJA_2045 - hypothetical protein 1988 53.29 0 2366346..2367227 - 293 192362038 - CJA_2046 - hydrolase, NUDIX family 1989 50.09 0 2367257..2368963 - 568 192360329 - CJA_2047 - PA1822-like protein 1990 53.36 0 2369200..2369913 - 237 192359256 dnaQ CJA_2048 - DNA polymerase III, epsilon subunit 1991 55.40 0 2369988..2370422 - 144 192361631 rnhA CJA_2049 - RNase H 1992 54.53 0 2370397..2371302 - 301 192360820 - CJA_2050 - Generic methyl-transferase 1993 48.96 0 2371390..2371485 - 31 192359473 - CJA_2051 - hypothetical protein 1994 54.25 0 2371608..2372243 + 211 192362517 - CJA_2052 - hydroxyacylglutathione hydrolase 1995 51.99 0 2372453..2374012 + 519 192361254 lmt23B CJA_2053 - lytic murein transglycosylase, putative, lmt23B 1996 51.67 0 2374082..2375695 - 537 192362004 - CJA_2054 - peptide ABC transporter, ATP-binding protein 1997 48.19 0 2375700..2376581 - 293 192359661 oppC CJA_2055 - oligopeptide ABC transporter, permease protein 1998 50.64 0 2376581..2377516 - 311 192360499 oppB CJA_2056 - oligopeptide transport system permease protein oppB 1999 47.29 0 2377528..2378265 - 245 192361776 - CJA_2057 - oligopeptide ABC transporter periplasmic oligopeptide-binding protein 2000 49.56 0 2378235..2379134 - 299 192358787 - CJA_2058 - oligopeptide ABC transporter periplasmic oligopeptide-binding protein 2001 46.87 0 2379215..2381305 - 696 192360108 - CJA_2059 - Peptidase family M3 52.09 MEAN 5.42 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0