version 1.0
Cellvibrio japonicus Ueda107, complete genome - 1..4576573 3754 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1466 54.15 0 1738188..1739960 + 590 192362080 sdhA CJA_1503 - succinate dehydrogenase, flavoprotein subunit 1467 50.07 0 1739975..1740679 + 234 192358883 sdhB CJA_1504 - succinate dehydrogenase, iron-sulfur protein 1468 52.05 0 1740878..1743709 + 943 192359900 sucA CJA_1505 - 2-oxoglutarate dehydrogenase, E1 component 1469 53.22 0 1743769..1744965 + 398 192359922 sucB CJA_1506 - 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase 1470 52.71 0 1745069..1746508 + 479 192361694 - CJA_1507 - dihydrolipoamide dehydrogenase 1471 52.56 0 1746583..1747794 + 403 192359200 sucC CJA_1508 - succinyl-CoA synthetase beta chain 1472 53.49 0 1747805..1748677 + 290 192360780 - CJA_1510 - succinyl-CoA synthetase alpha chain 1473 45.74 -1 1748664..1748792 - 42 192360027 - CJA_1509 - hypothetical protein 1474 49.61 0 1749054..1750976 + 640 192358903 speA CJA_1511 - arginine decarboxylase 1475 48.75 0 1751009..1752208 + 399 192359525 - CJA_1512 - saccharopine dehydrogenase 1476 49.92 0 1752186..1753409 + 407 192360578 nspC CJA_1513 - carboxynorspermidine decarboxylase 1477 51.83 0 1753438..1755075 - 545 192361197 - CJA_1514 - Na+/H+ antiporter 1478 41.38 -1 1755295..1756599 + 434 192360227 - CJA_1515 - putative membrane-fusion protein 1479 40.44 -2 1756599..1758752 + 717 192361580 - CJA_1516 - putative toxin secretion ABC transporter, ATP-binding subunit/permease protein 1480 43.14 -1 1758944..1759198 + 84 192361892 - CJA_1517 - hypothetical protein 1481 27.12 -2 1759277..1760113 + 278 192359366 - CJA_1518 - hypothetical protein 1482 28.29 -2 1760161..1761012 + 283 192359280 - CJA_1519 - hypothetical protein 1483 29.34 -2 1761060..1761911 + 283 192362441 - CJA_1520 - hypothetical protein 1484 35.64 -2 1761877..1763700 + 607 192362489 - CJA_1521 - hypothetical protein 1485 33.11 -2 1764176..1765993 + 605 192360861 amy13B CJA_1522 - alpha amylase, putative, amy13B 1486 51.83 0 1766437..1768269 - 610 192359817 - CJA_1523 - ABC-type multidrug efflux pump 1487 50.89 0 1768470..1768862 + 130 192358800 - CJA_1524 - hypothetical protein 1488 52.76 0 1768874..1769398 + 174 192360956 - CJA_1525 - hypothetical protein 1489 49.81 0 1769454..1770479 - 341 192359583 - CJA_1526 - hypothetical protein 1490 47.61 0 1770590..1771843 - 417 192362521 - CJA_1527 - hypothetical protein 1491 52.07 0 1772441..1773454 + 337 192361303 nahO CJA_1528 - acetaldehyde dehydrogenase 1492 53.42 0 1773493..1774149 - 218 192360473 - CJA_1529 - hypothetical protein 1493 49.69 0 1774603..1776864 + 753 192360072 - CJA_1530 - fatty acid cis/trans isomerase 1494 50.98 0 1776873..1777739 - 288 192362285 - CJA_1531 - hypothetical protein 1495 49.55 0 1778430..1778540 - 36 192361729 - CJA_1536 - hypothetical protein 1496 56.24 0 1778562..1779674 - 370 192359231 - CJA_1537 - hypothetical protein 1497 56.90 0 1779715..1783113 - 1132 192360562 - CJA_1538 - hypothetical protein 1498 56.50 0 1783124..1783723 - 199 192361418 - CJA_1539 - hypothetical protein 1499 56.72 0 1783723..1785210 - 495 192362220 - CJA_1540 - hypothetical protein 1500 55.31 0 1785321..1786667 - 448 192359254 - CJA_1541 - hypothetical protein 1501 57.20 0 1786664..1786927 - 87 192359188 - CJA_1542 - Putative transcriptional regulator 1502 58.72 +1 1787375..1788544 - 389 192361295 - CJA_1543 - hypothetical protein 1503 58.23 +1 1788569..1789492 - 307 192361830 - CJA_1544 - dienelactone hydrolase domain protein 1504 58.20 +1 1789627..1790547 + 306 192359615 - CJA_1545 - putative HTH-type transcriptional regulator YcjZ 1505 54.24 0 1790708..1792945 - 745 192361043 norB CJA_1546 - nitric oxide reductase qNor type 1506 58.93 +1 1793063..1793437 + 124 192361838 - CJA_1547 - hypothetical protein 1507 55.67 0 1793507..1794670 + 387 192362238 - CJA_1548 - NnrS protein superfamily 1508 49.28 0 1794654..1795136 + 160 192359950 - CJA_1549 - rrf2 family protein 1509 40.47 -2 1795167..1797899 - 910 192361152 - CJA_1550 - hypothetical protein 1510 55.34 0 1797890..1800088 - 732 192362232 - CJA_1551 - putative signaling protein 1511 49.16 0 1800312..1801259 + 315 192359502 - CJA_1552 - ABC transporter, ATP-binding protein 1512 46.64 -1 1801256..1802029 + 257 192359063 - CJA_1553 - ABC-type multidrug transport system, permease component 1513 51.76 0 1802064..1802888 + 274 192361267 - CJA_1554 - GTP cyclohydrolase I family protein 1514 49.39 0 1802896..1804278 - 460 192360627 - CJA_1555 - probable adenylate cyclase 1515 45.68 -1 1804257..1804418 + 53 192361820 - CJA_1557 - hypothetical protein 1516 50.93 0 1804275..1804382 - 35 192359570 - CJA_1556 - hypothetical protein 1517 48.08 0 1804420..1805667 - 415 192360668 - CJA_1558 - hypothetical protein 1518 54.12 0 1805853..1806410 + 185 192362331 - CJA_1559 - nitroreductase family protein 1519 50.71 0 1806988..1807338 - 116 192361525 - CJA_1562 - hypothetical protein 1520 54.65 0 1807398..1808396 - 332 192360246 - CJA_1563 - Luciferase-like monooxygenase 1521 44.63 -1 1808585..1808761 - 58 192361336 - CJA_1564 - hypothetical protein 1522 51.14 0 1808775..1810925 + 716 192360057 - CJA_1565 - hypothetical protein 1523 46.41 -1 1810993..1811451 - 152 192359242 - CJA_1566 - putative lipoprotein 1524 50.00 0 1811646..1812065 - 139 192361624 - CJA_1567 - hypothetical protein 1525 57.21 0 1812330..1813619 - 429 192360823 nrdB CJA_1568 - ribonucleoside reductase, beta subunit 1526 57.17 0 1813771..1816707 - 978 192361574 nrdA CJA_1569 - ribonucleoside reductase, large chain 1527 57.88 +1 1817548..1819584 - 678 192360282 - CJA_1570 - Tat (twin-arginine translocation) pathway signal sequence domain protein 1528 49.77 0 1819788..1820663 + 291 192359376 - CJA_1571 - hypothetical protein 1529 52.62 0 1821023..1823842 + 939 192361961 - CJA_1572 - putative TonB dependent receptor 1530 53.13 0 1823913..1825301 + 462 192361125 - CJA_1573 - Ser/Thr protein phosphatase family protein family 1531 60.09 +1 1825438..1826349 + 303 192359397 - CJA_1574 - ABC transporter substrate binding protein 1532 53.61 0 1826485..1827426 - 313 192360232 - CJA_1575 - polyphosphate kinase family protein 1533 52.67 0 1827946..1828338 + 130 192359867 - CJA_1576 - PIN (PilT N terminus) domain 1534 53.68 0 1828473..1829612 + 379 192361471 - CJA_1577 - fic family protein 1535 47.76 0 1829819..1831003 + 394 192361977 - CJA_1578 - putative ATP-dependent DNA helicase 1536 49.04 0 1831000..1831986 + 328 192359043 - CJA_1579 - phage-related regulatory protein cII 1537 45.08 -1 1832390..1833232 + 280 192360125 - CJA_1580 - hypothetical protein 1538 47.31 0 1833421..1834257 + 278 192362123 mod CJA_1581 - type III restriction-modification system methyltransferase 1539 51.20 0 1834257..1837268 + 1003 192359394 res CJA_1582 - type III restriction system endonuclease 1540 45.95 -1 1837439..1838104 - 221 192360267 csm2 CJA_1583 - CRISPR-associated protein, Csm2 family 1541 49.18 0 1838117..1839397 - 426 192361329 rloA CJA_1584 - RloA protein 1542 60.10 +1 1839659..1841197 + 512 192359002 - CJA_1585 - hypothetical protein 1543 61.42 +1 1841200..1841961 + 253 192359586 - CJA_1586 - hypothetical protein 1544 56.87 0 1841958..1845263 + 1101 192361080 - CJA_1587 - ATP synthase, Delta/Epsilon chain, long alpha-helix domain 1545 56.81 0 1845247..1846392 + 381 192361667 - CJA_1588 - hypothetical protein 1546 41.64 -1 1846479..1847549 + 356 192359305 - CJA_1589 - hypothetical protein 1547 66.89 +2 1847583..1849370 - 595 192360359 afuB_2 CJA_1590 - ABC transporter permease protein 1548 63.70 +2 1849437..1850414 - 325 192361403 - CJA_1591 - ABC transporter, substrate binding protein 1549 57.52 +1 1850748..1851884 - 378 192361106 - CJA_1592 - ABC transporter ATP-binding protein 1550 58.51 +1 1852020..1853894 - 624 192361654 - CJA_1593 - hypothetical protein 1551 52.29 0 1853929..1854081 + 50 192359414 - CJA_1594 - hypothetical protein 1552 51.18 0 1854362..1855504 - 380 192360288 - CJA_1595 - hypothetical protein 1553 58.82 +1 1855605..1856636 - 343 192361606 - CJA_1596 - hypothetical protein 1554 51.04 0 1856652..1857131 - 159 192362431 - CJA_1597 - hypothetical protein 1555 52.53 0 1857253..1858143 + 296 192361406 - CJA_1598 - Auxin Efflux Carrier superfamily 1556 56.51 0 1858157..1858747 - 196 192362440 cysC CJA_1599 - adenylylsulfate kinase 1557 52.38 0 1859053..1859703 + 216 192359926 - CJA_1600 - Aspartyl/Asparaginyl beta-hydroxylase family 1558 49.03 0 1859748..1860881 + 377 192362028 - CJA_1601 - hypothetical protein 1559 51.22 0 1861175..1862035 + 286 192360988 purU CJA_1602 - formyltetrahydrofolate deformylase 1560 58.31 +1 1862047..1863231 - 394 192362042 - CJA_1603 - transporter, major facilitator family 1561 54.40 0 1863505..1865118 + 537 192360301 lctP CJA_1604 - L-lactate permease 1562 55.86 0 1865189..1867705 - 838 192361441 gt35A CJA_1605 - carbohydrate phosphosrylase, putative, gt35A 1563 51.86 0 1867766..1868758 - 330 192362477 - CJA_1606 - D-lactate dehydrogenase 1564 52.45 0 1868860..1869471 - 203 192361811 - CJA_1607 - putative lipoprotein 1565 49.23 0 1869440..1870414 - 324 192359021 - CJA_1608 - hypothetical protein 52.09 MEAN 5.42 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0