version 1.0
Cellvibrio japonicus Ueda107, complete genome - 1..4576573 3754 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1412 49.76 0 1679785..1680204 - 139 192361958 holC CJA_1447 - DNA polymerase III, chi subunit 1413 59.31 +1 1680228..1681817 - 529 192360702 - CJA_1448 - cytosol aminopeptidase 1414 55.04 0 1682057..1683157 + 366 192359904 - CJA_1449 - putative permease, YjgP/YjgQ family superfamily 1415 52.22 0 1683150..1684208 + 352 192358887 - CJA_1450 - putative permease, YjgP/YjgQ family 1416 53.04 0 1684233..1684709 - 158 192362032 - CJA_1451 - putative RDD family 1417 53.85 0 1684725..1685621 - 298 192360313 - CJA_1452 - hypothetical protein 1418 53.33 0 1685618..1685722 - 34 192361660 - CJA_1453 - hypothetical protein 1419 55.89 0 1685985..1687079 + 364 192360885 queA CJA_1456 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1420 54.97 0 1687122..1688258 + 378 192360495 tgt CJA_1457 - queuine tRNA-ribosyltransferase 1421 50.59 0 1688443..1690320 + 625 192359607 secD CJA_1458 - protein-export membrane protein SecD 1422 49.23 0 1690333..1691496 + 387 192362116 secF CJA_1459 - protein-export membrane protein SecF 1423 49.70 0 1691483..1691647 + 54 192362131 - CJA_1460 - hypothetical protein 1424 48.88 0 1691666..1693672 + 668 192360040 - CJA_1461 - two-component hybrid sensor and regulator 1425 50.49 0 1694107..1696350 + 747 192359027 cel5A CJA_1462 - endo-1,4-beta glucanase, cel5A 1426 53.36 0 1696431..1697234 - 267 192361503 suhB CJA_1463 - extragenic suppressor protein SuhB 1427 56.56 0 1697479..1698339 + 286 192360664 - CJA_1464 - RNA methyltransferase, TrmH family, group 1 1428 54.60 0 1698538..1699026 + 162 192359869 iscR CJA_1465 - iron-sulfur cluster assembly transcription factor IscR 1429 57.30 0 1699047..1700210 + 387 192360188 - CJA_1466 - cysteine desulfurase used in synthesis of Fe-S cluster (tRNA 4-thiouridine sulfurtransferase ) 1430 50.94 0 1700238..1701674 + 478 192359328 sufB CJA_1467 - FeS assembly protein SufB 1431 50.98 0 1701726..1702490 + 254 192362310 sufC CJA_1468 - FeS assembly ATPase SufC 1432 53.95 0 1702494..1703798 + 434 192361506 sufD CJA_1469 - FeS assembly protein SufD 1433 53.24 0 1703795..1705060 + 421 192359601 - CJA_1470 - selenocysteine lyase 1434 53.23 0 1705075..1705446 + 123 192358912 - CJA_1471 - HesB protein 1435 54.98 0 1705519..1706040 + 173 192361887 - CJA_1472 - Domain of unknown function domain protein 1436 54.60 0 1706086..1706715 - 209 192361253 - CJA_1473 - transcriptional regulator, TetR family 1437 56.18 0 1706828..1709974 - 1048 192358947 acrB CJA_1474 - AcrB/AcrD/AcrF family protein 1438 58.01 +1 1709978..1711144 - 388 192359524 acrA CJA_1475 - multidrug resistance protein 1439 53.33 0 1711365..1711799 + 144 192361068 - CJA_1476 - Fe-S metabolism associated domain protein 1440 53.52 0 1712013..1712438 + 141 192359340 ndk CJA_1477 - nucleotide diphosphate kinase 1441 52.94 0 1712477..1713685 + 402 192359958 - CJA_1478 - radical SAM enzyme, Cfr family 1442 49.11 0 1713713..1714498 + 261 192361665 pilF CJA_1479 - type IV pilus biogenesis protein PilF 1443 51.96 0 1714554..1715498 + 314 192360405 - CJA_1480 - putative DNA-binding protein 1444 50.76 0 1715570..1716694 + 374 192358785 ispG CJA_1481 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1445 51.89 0 1716717..1717988 + 423 192360368 hisS CJA_1482 - histidyl-tRNA synthetase 1446 50.43 0 1718054..1718755 + 233 192361013 - CJA_1483 - hypothetical protein 1447 50.98 0 1718752..1719981 + 409 192361515 - CJA_1484 - PQQ enzyme repeat domain protein 1448 51.75 0 1720107..1721507 + 466 192362315 - CJA_1485 - GTP-binding protein EngA 1449 51.27 0 1721598..1722818 + 406 192359794 - CJA_1486 - response regulator 1450 48.65 0 1722815..1723297 + 160 192360609 - CJA_1487 - anti-anti-sigma factor 1451 49.67 0 1723340..1723798 - 152 192361202 - CJA_1488 - hypothetical protein 1452 51.83 0 1723788..1724744 - 318 192362065 tal CJA_1489 - transaldolase 1453 55.56 0 1724913..1725938 - 341 192359553 - CJA_1490 - tRNA-dihydrouridine synthase A 1454 53.86 0 1726076..1726567 + 163 192361857 moaC CJA_1491 - molybdenum cofactor biosynthesis protein C 1455 49.40 0 1726564..1726812 + 82 192361144 moaDE CJA_1492 - molybdenum cofactor biosynthesis protein D/E 1456 49.78 0 1726815..1727270 + 151 192359605 - CJA_1493 - molybdenum cofactor biosynthesis protein E 1457 50.57 0 1727316..1728632 - 438 192362514 - CJA_1494 - Glucose/galactose transporter 1458 51.31 0 1728881..1729987 + 368 192360127 - CJA_1495 - transcriptional regulator, LacI family 1459 50.95 0 1730045..1731043 - 332 192359017 glk CJA_1496 - glucokinase 1460 51.16 0 1731380..1733842 + 820 192359181 cel3B CJA_1497 - glucan 1,4-beta-glucosidase, putative, cel3B 1461 45.94 -1 1734298..1735503 + 401 192360915 - CJA_1498 - hypothetical protein 1462 51.76 0 1735580..1736860 - 426 192360292 gltA CJA_1499 - citrate synthase I 1463 54.47 0 1737045..1737167 + 40 192361481 - CJA_1500 - hypothetical protein 1464 49.87 0 1737437..1737823 + 128 192362455 - CJA_1501 - Succinate dehydrogenase cytochrome b subunit 1465 48.12 0 1737817..1738188 + 123 192360343 - CJA_1502 - succinate dehydrogenase hydrophobic membrane anchor protein 1466 54.15 0 1738188..1739960 + 590 192362080 sdhA CJA_1503 - succinate dehydrogenase, flavoprotein subunit 1467 50.07 0 1739975..1740679 + 234 192358883 sdhB CJA_1504 - succinate dehydrogenase, iron-sulfur protein 1468 52.05 0 1740878..1743709 + 943 192359900 sucA CJA_1505 - 2-oxoglutarate dehydrogenase, E1 component 1469 53.22 0 1743769..1744965 + 398 192359922 sucB CJA_1506 - 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase 1470 52.71 0 1745069..1746508 + 479 192361694 - CJA_1507 - dihydrolipoamide dehydrogenase 1471 52.56 0 1746583..1747794 + 403 192359200 sucC CJA_1508 - succinyl-CoA synthetase beta chain 1472 53.49 0 1747805..1748677 + 290 192360780 - CJA_1510 - succinyl-CoA synthetase alpha chain 1473 45.74 -1 1748664..1748792 - 42 192360027 - CJA_1509 - hypothetical protein 1474 49.61 0 1749054..1750976 + 640 192358903 speA CJA_1511 - arginine decarboxylase 1475 48.75 0 1751009..1752208 + 399 192359525 - CJA_1512 - saccharopine dehydrogenase 1476 49.92 0 1752186..1753409 + 407 192360578 nspC CJA_1513 - carboxynorspermidine decarboxylase 1477 51.83 0 1753438..1755075 - 545 192361197 - CJA_1514 - Na+/H+ antiporter 1478 41.38 -1 1755295..1756599 + 434 192360227 - CJA_1515 - putative membrane-fusion protein 1479 40.44 -2 1756599..1758752 + 717 192361580 - CJA_1516 - putative toxin secretion ABC transporter, ATP-binding subunit/permease protein 1480 43.14 -1 1758944..1759198 + 84 192361892 - CJA_1517 - hypothetical protein 1481 27.12 -2 1759277..1760113 + 278 192359366 - CJA_1518 - hypothetical protein 1482 28.29 -2 1760161..1761012 + 283 192359280 - CJA_1519 - hypothetical protein 1483 29.34 -2 1761060..1761911 + 283 192362441 - CJA_1520 - hypothetical protein 1484 35.64 -2 1761877..1763700 + 607 192362489 - CJA_1521 - hypothetical protein 1485 33.11 -2 1764176..1765993 + 605 192360861 amy13B CJA_1522 - alpha amylase, putative, amy13B 1486 51.83 0 1766437..1768269 - 610 192359817 - CJA_1523 - ABC-type multidrug efflux pump 1487 50.89 0 1768470..1768862 + 130 192358800 - CJA_1524 - hypothetical protein 1488 52.76 0 1768874..1769398 + 174 192360956 - CJA_1525 - hypothetical protein 1489 49.81 0 1769454..1770479 - 341 192359583 - CJA_1526 - hypothetical protein 1490 47.61 0 1770590..1771843 - 417 192362521 - CJA_1527 - hypothetical protein 1491 52.07 0 1772441..1773454 + 337 192361303 nahO CJA_1528 - acetaldehyde dehydrogenase 1492 53.42 0 1773493..1774149 - 218 192360473 - CJA_1529 - hypothetical protein 1493 49.69 0 1774603..1776864 + 753 192360072 - CJA_1530 - fatty acid cis/trans isomerase 1494 50.98 0 1776873..1777739 - 288 192362285 - CJA_1531 - hypothetical protein 1495 49.55 0 1778430..1778540 - 36 192361729 - CJA_1536 - hypothetical protein 1496 56.24 0 1778562..1779674 - 370 192359231 - CJA_1537 - hypothetical protein 1497 56.90 0 1779715..1783113 - 1132 192360562 - CJA_1538 - hypothetical protein 1498 56.50 0 1783124..1783723 - 199 192361418 - CJA_1539 - hypothetical protein 1499 56.72 0 1783723..1785210 - 495 192362220 - CJA_1540 - hypothetical protein 1500 55.31 0 1785321..1786667 - 448 192359254 - CJA_1541 - hypothetical protein 1501 57.20 0 1786664..1786927 - 87 192359188 - CJA_1542 - Putative transcriptional regulator 1502 58.72 +1 1787375..1788544 - 389 192361295 - CJA_1543 - hypothetical protein 1503 58.23 +1 1788569..1789492 - 307 192361830 - CJA_1544 - dienelactone hydrolase domain protein 1504 58.20 +1 1789627..1790547 + 306 192359615 - CJA_1545 - putative HTH-type transcriptional regulator YcjZ 1505 54.24 0 1790708..1792945 - 745 192361043 norB CJA_1546 - nitric oxide reductase qNor type 1506 58.93 +1 1793063..1793437 + 124 192361838 - CJA_1547 - hypothetical protein 1507 55.67 0 1793507..1794670 + 387 192362238 - CJA_1548 - NnrS protein superfamily 1508 49.28 0 1794654..1795136 + 160 192359950 - CJA_1549 - rrf2 family protein 1509 40.47 -2 1795167..1797899 - 910 192361152 - CJA_1550 - hypothetical protein 1510 55.34 0 1797890..1800088 - 732 192362232 - CJA_1551 - putative signaling protein 1511 49.16 0 1800312..1801259 + 315 192359502 - CJA_1552 - ABC transporter, ATP-binding protein 52.09 MEAN 5.42 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0