version 1.0
Cellvibrio japonicus Ueda107, complete genome - 1..4576573 3754 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1379 52.31 0 1650364..1651143 + 259 192359565 - CJA_1414 - putative outer membrane protein 1380 58.17 +1 1651218..1652135 + 305 192360556 - CJA_1415 - lipid A biosynthesis lauroyl acyltransferase 1381 35.02 -2 1653154..1653390 - 78 192361162 - CJA_1416 - hypothetical protein 1382 42.09 -1 1653472..1654008 + 178 192362254 - CJA_1417 - hypothetical protein 1383 40.00 -2 1654071..1654175 + 34 192361846 - CJA_1418 - hypothetical protein 1384 45.79 -1 1654208..1655764 + 518 192359156 - CJA_1419 - Transposase IS4 family 1385 36.65 -2 1655933..1656775 + 280 192359901 - CJA_1420 - hypothetical protein 1386 52.70 0 1656785..1657579 - 264 192360835 - CJA_1421 - IS3 family element, transposase orfB 1387 41.06 -2 1657839..1659029 - 396 192361126 - CJA_1422 - relative of glycosyl transferase family GT1, gt*A 1388 40.09 -2 1659042..1659899 - 285 192362134 - CJA_1423 - hypothetical protein 1389 43.64 -1 1660182..1660928 + 248 192359533 - CJA_1424 - SapC family protein 1390 46.46 -1 1660934..1661032 + 32 192360567 - CJA_1425 - hypothetical protein 1391 51.11 0 1661036..1661350 - 104 192361732 - CJA_1426 - putative sigma 54 modulation protein 1392 50.88 0 1661561..1662415 - 284 192359039 - CJA_1427 - transposase 1393 46.33 -1 1662412..1662711 - 99 192360140 - CJA_1428 - transposase 1394 53.76 0 1662869..1663798 + 309 192361213 - CJA_1429 - conserved hypothetical protein TIGR01777 1395 47.50 0 1663946..1664425 + 159 192362218 - CJA_1430 - 16 kDa heat shock protein A 1396 49.70 0 1664476..1665483 - 335 192359511 - CJA_1431 - transcriptional regulator, AraC family 1397 53.78 0 1665609..1667525 + 638 192359688 - CJA_1432 - probable beta-ketoacyl synthase 1398 52.04 0 1667659..1667952 + 97 192360102 rpsP CJA_1433 - ribosomal protein S16 1399 50.65 0 1667967..1668503 + 178 192360672 rimM CJA_1434 - 16S rRNA processing protein RimM 1400 54.70 0 1668500..1669276 + 258 192359118 trmD CJA_1435 - tRNA (guanine-N1)-methyltransferase 1401 49.29 0 1669309..1669659 + 116 192360163 rplS CJA_1436 - ribosomal protein L19 1402 52.67 0 1669735..1670634 + 299 192360546 xerD CJA_1437 - tyrosine recombinase XerD 1403 52.70 0 1670670..1671485 + 271 192361175 dsbC CJA_1438 - thiol:disulfide interchange protein DsbC 1404 51.30 0 1671635..1672942 + 435 192358857 hom CJA_1439 - homoserine dehydrogenase 1405 53.65 0 1672964..1674361 + 465 192361770 thrC CJA_1440 - threonine synthase 1406 51.83 0 1674447..1675295 + 282 192360534 - CJA_1441 - thioredoxin-like protein 1407 51.69 0 1675573..1676373 + 266 192361897 - CJA_1442 - hypothetical protein 1408 55.70 0 1676525..1677463 - 312 192362386 - CJA_1443 - predicted GTPase 1409 51.26 0 1677470..1677787 - 105 192361173 - CJA_1444 - hypothetical protein 1410 56.33 0 1677916..1679124 + 402 192359520 - CJA_1446 - Sugar efflux transporter A 1411 55.35 0 1679105..1679767 - 220 192359777 - CJA_1445 - hypothetical protein 1412 49.76 0 1679785..1680204 - 139 192361958 holC CJA_1447 - DNA polymerase III, chi subunit 1413 59.31 +1 1680228..1681817 - 529 192360702 - CJA_1448 - cytosol aminopeptidase 1414 55.04 0 1682057..1683157 + 366 192359904 - CJA_1449 - putative permease, YjgP/YjgQ family superfamily 1415 52.22 0 1683150..1684208 + 352 192358887 - CJA_1450 - putative permease, YjgP/YjgQ family 1416 53.04 0 1684233..1684709 - 158 192362032 - CJA_1451 - putative RDD family 1417 53.85 0 1684725..1685621 - 298 192360313 - CJA_1452 - hypothetical protein 1418 53.33 0 1685618..1685722 - 34 192361660 - CJA_1453 - hypothetical protein 1419 55.89 0 1685985..1687079 + 364 192360885 queA CJA_1456 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1420 54.97 0 1687122..1688258 + 378 192360495 tgt CJA_1457 - queuine tRNA-ribosyltransferase 1421 50.59 0 1688443..1690320 + 625 192359607 secD CJA_1458 - protein-export membrane protein SecD 1422 49.23 0 1690333..1691496 + 387 192362116 secF CJA_1459 - protein-export membrane protein SecF 1423 49.70 0 1691483..1691647 + 54 192362131 - CJA_1460 - hypothetical protein 1424 48.88 0 1691666..1693672 + 668 192360040 - CJA_1461 - two-component hybrid sensor and regulator 1425 50.49 0 1694107..1696350 + 747 192359027 cel5A CJA_1462 - endo-1,4-beta glucanase, cel5A 1426 53.36 0 1696431..1697234 - 267 192361503 suhB CJA_1463 - extragenic suppressor protein SuhB 1427 56.56 0 1697479..1698339 + 286 192360664 - CJA_1464 - RNA methyltransferase, TrmH family, group 1 1428 54.60 0 1698538..1699026 + 162 192359869 iscR CJA_1465 - iron-sulfur cluster assembly transcription factor IscR 1429 57.30 0 1699047..1700210 + 387 192360188 - CJA_1466 - cysteine desulfurase used in synthesis of Fe-S cluster (tRNA 4-thiouridine sulfurtransferase ) 1430 50.94 0 1700238..1701674 + 478 192359328 sufB CJA_1467 - FeS assembly protein SufB 1431 50.98 0 1701726..1702490 + 254 192362310 sufC CJA_1468 - FeS assembly ATPase SufC 1432 53.95 0 1702494..1703798 + 434 192361506 sufD CJA_1469 - FeS assembly protein SufD 1433 53.24 0 1703795..1705060 + 421 192359601 - CJA_1470 - selenocysteine lyase 1434 53.23 0 1705075..1705446 + 123 192358912 - CJA_1471 - HesB protein 1435 54.98 0 1705519..1706040 + 173 192361887 - CJA_1472 - Domain of unknown function domain protein 1436 54.60 0 1706086..1706715 - 209 192361253 - CJA_1473 - transcriptional regulator, TetR family 1437 56.18 0 1706828..1709974 - 1048 192358947 acrB CJA_1474 - AcrB/AcrD/AcrF family protein 1438 58.01 +1 1709978..1711144 - 388 192359524 acrA CJA_1475 - multidrug resistance protein 1439 53.33 0 1711365..1711799 + 144 192361068 - CJA_1476 - Fe-S metabolism associated domain protein 1440 53.52 0 1712013..1712438 + 141 192359340 ndk CJA_1477 - nucleotide diphosphate kinase 1441 52.94 0 1712477..1713685 + 402 192359958 - CJA_1478 - radical SAM enzyme, Cfr family 1442 49.11 0 1713713..1714498 + 261 192361665 pilF CJA_1479 - type IV pilus biogenesis protein PilF 1443 51.96 0 1714554..1715498 + 314 192360405 - CJA_1480 - putative DNA-binding protein 1444 50.76 0 1715570..1716694 + 374 192358785 ispG CJA_1481 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1445 51.89 0 1716717..1717988 + 423 192360368 hisS CJA_1482 - histidyl-tRNA synthetase 1446 50.43 0 1718054..1718755 + 233 192361013 - CJA_1483 - hypothetical protein 1447 50.98 0 1718752..1719981 + 409 192361515 - CJA_1484 - PQQ enzyme repeat domain protein 1448 51.75 0 1720107..1721507 + 466 192362315 - CJA_1485 - GTP-binding protein EngA 1449 51.27 0 1721598..1722818 + 406 192359794 - CJA_1486 - response regulator 1450 48.65 0 1722815..1723297 + 160 192360609 - CJA_1487 - anti-anti-sigma factor 1451 49.67 0 1723340..1723798 - 152 192361202 - CJA_1488 - hypothetical protein 1452 51.83 0 1723788..1724744 - 318 192362065 tal CJA_1489 - transaldolase 1453 55.56 0 1724913..1725938 - 341 192359553 - CJA_1490 - tRNA-dihydrouridine synthase A 1454 53.86 0 1726076..1726567 + 163 192361857 moaC CJA_1491 - molybdenum cofactor biosynthesis protein C 1455 49.40 0 1726564..1726812 + 82 192361144 moaDE CJA_1492 - molybdenum cofactor biosynthesis protein D/E 1456 49.78 0 1726815..1727270 + 151 192359605 - CJA_1493 - molybdenum cofactor biosynthesis protein E 1457 50.57 0 1727316..1728632 - 438 192362514 - CJA_1494 - Glucose/galactose transporter 1458 51.31 0 1728881..1729987 + 368 192360127 - CJA_1495 - transcriptional regulator, LacI family 1459 50.95 0 1730045..1731043 - 332 192359017 glk CJA_1496 - glucokinase 1460 51.16 0 1731380..1733842 + 820 192359181 cel3B CJA_1497 - glucan 1,4-beta-glucosidase, putative, cel3B 1461 45.94 -1 1734298..1735503 + 401 192360915 - CJA_1498 - hypothetical protein 1462 51.76 0 1735580..1736860 - 426 192360292 gltA CJA_1499 - citrate synthase I 1463 54.47 0 1737045..1737167 + 40 192361481 - CJA_1500 - hypothetical protein 1464 49.87 0 1737437..1737823 + 128 192362455 - CJA_1501 - Succinate dehydrogenase cytochrome b subunit 1465 48.12 0 1737817..1738188 + 123 192360343 - CJA_1502 - succinate dehydrogenase hydrophobic membrane anchor protein 1466 54.15 0 1738188..1739960 + 590 192362080 sdhA CJA_1503 - succinate dehydrogenase, flavoprotein subunit 1467 50.07 0 1739975..1740679 + 234 192358883 sdhB CJA_1504 - succinate dehydrogenase, iron-sulfur protein 1468 52.05 0 1740878..1743709 + 943 192359900 sucA CJA_1505 - 2-oxoglutarate dehydrogenase, E1 component 1469 53.22 0 1743769..1744965 + 398 192359922 sucB CJA_1506 - 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase 1470 52.71 0 1745069..1746508 + 479 192361694 - CJA_1507 - dihydrolipoamide dehydrogenase 1471 52.56 0 1746583..1747794 + 403 192359200 sucC CJA_1508 - succinyl-CoA synthetase beta chain 1472 53.49 0 1747805..1748677 + 290 192360780 - CJA_1510 - succinyl-CoA synthetase alpha chain 1473 45.74 -1 1748664..1748792 - 42 192360027 - CJA_1509 - hypothetical protein 1474 49.61 0 1749054..1750976 + 640 192358903 speA CJA_1511 - arginine decarboxylase 1475 48.75 0 1751009..1752208 + 399 192359525 - CJA_1512 - saccharopine dehydrogenase 1476 49.92 0 1752186..1753409 + 407 192360578 nspC CJA_1513 - carboxynorspermidine decarboxylase 1477 51.83 0 1753438..1755075 - 545 192361197 - CJA_1514 - Na+/H+ antiporter 1478 41.38 -1 1755295..1756599 + 434 192360227 - CJA_1515 - putative membrane-fusion protein 52.09 MEAN 5.42 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0