version 1.0
Cellvibrio japonicus Ueda107, complete genome - 1..4576573 3754 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1346 44.17 -1 1605847..1606215 - 122 192360848 - CJA_1381 - hypothetical protein 1347 48.34 0 1606330..1607628 - 432 192361221 - CJA_1382 - methyl-accepting chemotaxis protein 1348 33.33 -2 1607797..1607967 + 56 192362275 - CJA_1383 - hypothetical protein 1349 47.90 0 1608083..1609579 + 498 192359161 - CJA_1384 - hypothetical protein 1350 53.15 0 1609634..1610617 + 327 192359741 - CJA_1385 - hypothetical protein 1351 56.73 0 1610625..1611590 - 321 192360796 - CJA_1386 - dihydrouridine synthase family protein 1352 53.37 0 1611683..1613164 + 493 192359487 - CJA_1387 - ATP-dependent RNA helicase, DEAD box family 1353 43.14 -1 1613475..1613576 + 33 192360458 - CJA_1388 - hypothetical protein 1354 50.56 0 1613548..1614348 + 266 192361208 phoH CJA_1389 - PhoH-like protein 1355 42.34 -1 1614332..1614442 + 36 192362273 - CJA_1390 - hypothetical protein 1356 52.38 0 1614494..1615354 + 286 192359084 rrmA CJA_1391 - rRNA guanine-N1-methyltransferase 1357 53.94 0 1615603..1617402 + 599 192358872 - CJA_1392 - probable agglutination protein 1358 53.30 0 1617512..1619665 + 717 192362507 - CJA_1393 - toxin secretion ATP-binding protein 1359 54.29 0 1619665..1621110 + 481 192361457 - CJA_1394 - HlyD-family secretion protein 1360 56.51 0 1621107..1621697 + 196 192359096 - CJA_1395 - putative two-component response regulator 1361 53.32 0 1621911..1629059 + 2382 192359277 - CJA_1396 - putative hemolysin 1362 52.34 0 1629078..1629440 + 120 192360727 - CJA_1397 - hypothetical protein 1363 51.84 0 1629449..1631350 - 633 192360164 - CJA_1398 - EAL domain protein 1364 55.86 0 1631353..1632120 - 255 192360105 - CJA_1399 - hypothetical protein 1365 50.05 0 1632245..1634320 - 691 192360410 - CJA_1400 - GGDEF domain protein 1366 50.12 0 1634343..1635599 - 418 192361769 - CJA_1401 - Bacterial extracellular solute-binding protein domain protein 1367 51.47 0 1635938..1638154 + 738 192362533 amy13C CJA_1402 - alpha amylase, putative, amy13C 1368 52.74 0 1638287..1639636 + 449 192359313 - CJA_1403 - alkaline phosphatase III 1369 54.26 0 1639642..1641753 - 703 192360298 - CJA_1404 - oxidoreductase alpha (molybdopterin) subunit 1370 61.90 +1 1641794..1641982 + 62 192360946 - CJA_1405 - regulator protein PecM 1371 58.09 +1 1642054..1642776 + 240 192362017 - CJA_1406 - two-component response regulator CreB 1372 54.48 0 1642773..1644200 + 475 192358981 creC CJA_1407 - two-component sensor CreC 1373 52.19 0 1644275..1645621 + 448 192359931 creD CJA_1408 - inner membrane protein CreD 1374 54.41 0 1645888..1646907 - 339 192360126 - CJA_1409 - oxidoreductase, aldo/keto reductase family 1375 49.64 0 1647008..1647418 - 136 192361166 - CJA_1410 - hypothetical protein 1376 53.78 0 1647591..1648832 + 413 192361691 - CJA_1411 - Short-chain alcohol dehydrogenase superfamily 1377 52.21 0 1648897..1649802 + 301 192360768 - CJA_1412 - acyltransferase family protein 1378 56.00 0 1649913..1650137 + 74 192361758 - CJA_1413 - hypothetical protein 1379 52.31 0 1650364..1651143 + 259 192359565 - CJA_1414 - putative outer membrane protein 1380 58.17 +1 1651218..1652135 + 305 192360556 - CJA_1415 - lipid A biosynthesis lauroyl acyltransferase 1381 35.02 -2 1653154..1653390 - 78 192361162 - CJA_1416 - hypothetical protein 1382 42.09 -1 1653472..1654008 + 178 192362254 - CJA_1417 - hypothetical protein 1383 40.00 -2 1654071..1654175 + 34 192361846 - CJA_1418 - hypothetical protein 1384 45.79 -1 1654208..1655764 + 518 192359156 - CJA_1419 - Transposase IS4 family 1385 36.65 -2 1655933..1656775 + 280 192359901 - CJA_1420 - hypothetical protein 1386 52.70 0 1656785..1657579 - 264 192360835 - CJA_1421 - IS3 family element, transposase orfB 1387 41.06 -2 1657839..1659029 - 396 192361126 - CJA_1422 - relative of glycosyl transferase family GT1, gt*A 1388 40.09 -2 1659042..1659899 - 285 192362134 - CJA_1423 - hypothetical protein 1389 43.64 -1 1660182..1660928 + 248 192359533 - CJA_1424 - SapC family protein 1390 46.46 -1 1660934..1661032 + 32 192360567 - CJA_1425 - hypothetical protein 1391 51.11 0 1661036..1661350 - 104 192361732 - CJA_1426 - putative sigma 54 modulation protein 1392 50.88 0 1661561..1662415 - 284 192359039 - CJA_1427 - transposase 1393 46.33 -1 1662412..1662711 - 99 192360140 - CJA_1428 - transposase 1394 53.76 0 1662869..1663798 + 309 192361213 - CJA_1429 - conserved hypothetical protein TIGR01777 1395 47.50 0 1663946..1664425 + 159 192362218 - CJA_1430 - 16 kDa heat shock protein A 1396 49.70 0 1664476..1665483 - 335 192359511 - CJA_1431 - transcriptional regulator, AraC family 1397 53.78 0 1665609..1667525 + 638 192359688 - CJA_1432 - probable beta-ketoacyl synthase 1398 52.04 0 1667659..1667952 + 97 192360102 rpsP CJA_1433 - ribosomal protein S16 1399 50.65 0 1667967..1668503 + 178 192360672 rimM CJA_1434 - 16S rRNA processing protein RimM 1400 54.70 0 1668500..1669276 + 258 192359118 trmD CJA_1435 - tRNA (guanine-N1)-methyltransferase 1401 49.29 0 1669309..1669659 + 116 192360163 rplS CJA_1436 - ribosomal protein L19 1402 52.67 0 1669735..1670634 + 299 192360546 xerD CJA_1437 - tyrosine recombinase XerD 1403 52.70 0 1670670..1671485 + 271 192361175 dsbC CJA_1438 - thiol:disulfide interchange protein DsbC 1404 51.30 0 1671635..1672942 + 435 192358857 hom CJA_1439 - homoserine dehydrogenase 1405 53.65 0 1672964..1674361 + 465 192361770 thrC CJA_1440 - threonine synthase 1406 51.83 0 1674447..1675295 + 282 192360534 - CJA_1441 - thioredoxin-like protein 1407 51.69 0 1675573..1676373 + 266 192361897 - CJA_1442 - hypothetical protein 1408 55.70 0 1676525..1677463 - 312 192362386 - CJA_1443 - predicted GTPase 1409 51.26 0 1677470..1677787 - 105 192361173 - CJA_1444 - hypothetical protein 1410 56.33 0 1677916..1679124 + 402 192359520 - CJA_1446 - Sugar efflux transporter A 1411 55.35 0 1679105..1679767 - 220 192359777 - CJA_1445 - hypothetical protein 1412 49.76 0 1679785..1680204 - 139 192361958 holC CJA_1447 - DNA polymerase III, chi subunit 1413 59.31 +1 1680228..1681817 - 529 192360702 - CJA_1448 - cytosol aminopeptidase 1414 55.04 0 1682057..1683157 + 366 192359904 - CJA_1449 - putative permease, YjgP/YjgQ family superfamily 1415 52.22 0 1683150..1684208 + 352 192358887 - CJA_1450 - putative permease, YjgP/YjgQ family 1416 53.04 0 1684233..1684709 - 158 192362032 - CJA_1451 - putative RDD family 1417 53.85 0 1684725..1685621 - 298 192360313 - CJA_1452 - hypothetical protein 1418 53.33 0 1685618..1685722 - 34 192361660 - CJA_1453 - hypothetical protein 1419 55.89 0 1685985..1687079 + 364 192360885 queA CJA_1456 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1420 54.97 0 1687122..1688258 + 378 192360495 tgt CJA_1457 - queuine tRNA-ribosyltransferase 1421 50.59 0 1688443..1690320 + 625 192359607 secD CJA_1458 - protein-export membrane protein SecD 1422 49.23 0 1690333..1691496 + 387 192362116 secF CJA_1459 - protein-export membrane protein SecF 1423 49.70 0 1691483..1691647 + 54 192362131 - CJA_1460 - hypothetical protein 1424 48.88 0 1691666..1693672 + 668 192360040 - CJA_1461 - two-component hybrid sensor and regulator 1425 50.49 0 1694107..1696350 + 747 192359027 cel5A CJA_1462 - endo-1,4-beta glucanase, cel5A 1426 53.36 0 1696431..1697234 - 267 192361503 suhB CJA_1463 - extragenic suppressor protein SuhB 1427 56.56 0 1697479..1698339 + 286 192360664 - CJA_1464 - RNA methyltransferase, TrmH family, group 1 1428 54.60 0 1698538..1699026 + 162 192359869 iscR CJA_1465 - iron-sulfur cluster assembly transcription factor IscR 1429 57.30 0 1699047..1700210 + 387 192360188 - CJA_1466 - cysteine desulfurase used in synthesis of Fe-S cluster (tRNA 4-thiouridine sulfurtransferase ) 1430 50.94 0 1700238..1701674 + 478 192359328 sufB CJA_1467 - FeS assembly protein SufB 1431 50.98 0 1701726..1702490 + 254 192362310 sufC CJA_1468 - FeS assembly ATPase SufC 1432 53.95 0 1702494..1703798 + 434 192361506 sufD CJA_1469 - FeS assembly protein SufD 1433 53.24 0 1703795..1705060 + 421 192359601 - CJA_1470 - selenocysteine lyase 1434 53.23 0 1705075..1705446 + 123 192358912 - CJA_1471 - HesB protein 1435 54.98 0 1705519..1706040 + 173 192361887 - CJA_1472 - Domain of unknown function domain protein 1436 54.60 0 1706086..1706715 - 209 192361253 - CJA_1473 - transcriptional regulator, TetR family 1437 56.18 0 1706828..1709974 - 1048 192358947 acrB CJA_1474 - AcrB/AcrD/AcrF family protein 1438 58.01 +1 1709978..1711144 - 388 192359524 acrA CJA_1475 - multidrug resistance protein 1439 53.33 0 1711365..1711799 + 144 192361068 - CJA_1476 - Fe-S metabolism associated domain protein 1440 53.52 0 1712013..1712438 + 141 192359340 ndk CJA_1477 - nucleotide diphosphate kinase 1441 52.94 0 1712477..1713685 + 402 192359958 - CJA_1478 - radical SAM enzyme, Cfr family 1442 49.11 0 1713713..1714498 + 261 192361665 pilF CJA_1479 - type IV pilus biogenesis protein PilF 1443 51.96 0 1714554..1715498 + 314 192360405 - CJA_1480 - putative DNA-binding protein 1444 50.76 0 1715570..1716694 + 374 192358785 ispG CJA_1481 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1445 51.89 0 1716717..1717988 + 423 192360368 hisS CJA_1482 - histidyl-tRNA synthetase 52.09 MEAN 5.42 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0