version 1.0
Cellvibrio japonicus Ueda107, complete genome - 1..4576573 3754 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1016 53.26 0 1226046..1227074 - 342 192361251 hda CJA_1043 - histone deacetylase family protein 1017 53.59 0 1227045..1229216 + 723 192359127 - CJA_1045 - sulfatase 1018 51.56 0 1229290..1231023 + 577 192359959 - CJA_1046 - hypothetical protein 1019 49.67 0 1231115..1231420 + 101 192360828 - CJA_1047 - hypothetical protein 1020 52.99 0 1231469..1232221 + 250 192361652 - CJA_1048 - hypothetical protein 1021 52.12 0 1232236..1233747 - 503 192359141 rebH CJA_1049 - tryptophan halogenase 1022 53.47 0 1233842..1236568 - 908 192361210 - CJA_1050 - TonB-dependent receptor 1023 54.93 0 1236852..1238300 - 482 192358817 - CJA_1051 - amino acid permease 1024 50.03 0 1238613..1240043 - 476 192359949 - CJA_1052 - hypothetical protein 1025 47.06 0 1240264..1240365 - 33 192360978 - CJA_1053 - hypothetical protein 1026 59.12 +1 1240385..1242862 + 825 192362001 - CJA_1054 - hypothetical protein 1027 59.59 +1 1242834..1244189 + 451 192359298 - CJA_1055 - hypothetical protein 1028 57.53 +1 1244265..1245566 + 433 192360434 - CJA_1056 - putative ankyrin G 1029 49.00 0 1245563..1246060 + 165 192361513 cycP CJA_1057 - cytochrome c'' 1030 52.65 0 1246064..1246741 + 225 192360713 cybP CJA_1058 - CybP 1031 55.52 0 1246757..1247635 + 292 192361917 - CJA_1059 - putative hydrolase 1032 54.44 0 1247737..1249830 - 697 192360734 - CJA_1060 - translation elongation factor G 1033 57.04 0 1250068..1252977 - 969 192360628 gcvP CJA_1061 - glycine dehydrogenase 1034 57.97 +1 1253177..1254361 + 394 192358921 - CJA_1062 - metabolite transport protein-like protein 1035 50.91 0 1254399..1256162 + 587 192361798 gspA CJA_1063 - general secretion pathway protein a 1036 54.79 0 1256162..1257028 + 288 192361081 - CJA_1064 - hypothetical protein 1037 49.27 0 1257058..1257534 - 158 192360041 bfr CJA_1065 - bacterioferritin 1038 49.22 0 1257688..1257945 - 85 192362318 - CJA_1066 - bacterioferritin-associated ferredoxin-related protein 1039 53.07 0 1258249..1258851 + 200 192361205 - CJA_1067 - probable peroxidase 1040 51.72 0 1259032..1259640 + 202 192360624 ung CJA_1068 - uracil-DNA glycosylase 1041 47.72 0 1259961..1263080 + 1039 192359564 - CJA_1069 - putative TonB-dependent receptor 1042 46.47 -1 1263166..1264665 + 499 192361347 - CJA_1070 - tryptophan halogenase 1043 54.82 0 1265164..1266294 + 376 192360540 - CJA_1071 - phosphoserine aminotransferase 1044 51.45 0 1266400..1267575 + 391 192359656 - CJA_1072 - D-isomer specific 2-hydroxyacid dehydrogenase 1045 55.56 0 1267580..1267894 + 104 192361313 - CJA_1073 - hypothetical protein 1046 54.83 0 1267866..1268507 + 213 192359075 - CJA_1074 - hydrolase, NUDIX family 1047 48.13 0 1268838..1270466 + 542 192362139 fadD1 CJA_1075 - long-chain-fatty-acid--CoA ligase 1048 49.57 0 1270552..1271481 + 309 192360756 - CJA_1076 - hypothetical protein 1049 49.69 0 1271490..1271966 + 158 192359952 - CJA_1077 - hypothetical protein 1050 53.95 0 1271979..1273118 + 379 192361705 uvs083 CJA_1078 - Uvs083 1051 54.96 0 1273187..1273690 - 167 192360436 - CJA_1079 - hypothetical protein 1052 55.18 0 1273674..1275440 - 588 192359000 cysI CJA_1080 - sulphite reductase 1053 45.83 -1 1275443..1275562 + 39 192359821 - CJA_1081 - hypothetical protein 1054 56.31 0 1275607..1276272 + 221 192361541 - CJA_1082 - ribosomal large subunit pseudouridine synthase A 1055 53.97 0 1276334..1277467 + 377 192362394 - CJA_1083 - hypothetical protein 1056 51.10 0 1277531..1278391 - 286 192359444 - CJA_1084 - Integral membrane protein DUF6 domain protein 1057 55.84 0 1278624..1280276 - 550 192360277 - CJA_1085 - sodium:solute symporter family protein 1058 57.01 0 1280276..1280596 - 106 192359757 - CJA_1086 - hypothetical protein 1059 55.44 0 1280780..1281376 - 198 192361059 - CJA_1087 - DNA-binding response regulator, LuxR family 1060 54.41 0 1281386..1282486 - 366 192362474 - CJA_1088 - two-component system sensor protein 1061 49.12 0 1282685..1283197 + 170 192362209 - CJA_1089 - conserved hypothetical protein TIGR00645 1062 56.59 0 1283277..1285151 - 624 192359192 - CJA_1090 - FAD binding domain protein 1063 55.81 0 1285352..1286512 - 386 192362295 dapE CJA_1091 - succinyl-diaminopimelate desuccinylase 1064 54.15 0 1286658..1287248 - 196 192359029 hspC2 CJA_1092 - small heat shock protein 1065 55.13 0 1287348..1287815 - 155 192360651 - CJA_1093 - 16 kDa heat shock protein A 1066 54.75 0 1288298..1289254 + 318 192361190 - CJA_1094 - ABC transporter domain protein 1067 54.32 0 1289244..1292135 + 963 192360856 - CJA_1095 - hypothetical protein 1068 52.35 0 1292151..1293149 + 332 192361740 - CJA_1096 - hypothetical protein 1069 43.88 -1 1293198..1293434 - 78 192359210 - CJA_1097 - hypothetical protein 1070 44.36 -1 1293431..1293811 - 126 192360035 - CJA_1098 - hypothetical protein 1071 55.27 0 1293996..1294697 - 233 192361072 - CJA_1099 - conserved hypothetical protein TIGR01033 1072 58.24 +1 1294762..1295793 - 343 192359735 dapD CJA_1100 - tetrahydrodipicolinate N-succinyltransferase 1073 48.99 0 1295832..1296176 - 114 192360728 - CJA_1101 - Protein yffB 1074 52.58 0 1296173..1296889 - 238 192360120 - CJA_1102 - endonuclease III 1075 55.08 0 1296841..1298040 - 399 192359079 - CJA_1103 - aminotransferase, class I 1076 52.65 0 1298071..1300788 - 905 192362270 glnD CJA_1104 - protein-P-II uridylyltransferase 1077 54.67 0 1300861..1301652 - 263 192361188 map CJA_1105 - methionine aminopeptidase, type I 1078 53.37 0 1301943..1302431 + 162 192360565 - CJA_1106 - hypothetical protein 1079 55.50 0 1302483..1303109 + 208 192361632 - CJA_1107 - superoxide dismutase 1080 53.75 0 1303109..1304029 + 306 192360798 - CJA_1108 - gufA protein 1081 60.34 +1 1304097..1305314 - 405 192362286 uxuA CJA_1109 - mannonate dehydratase 1082 52.09 0 1305699..1306439 + 246 192361500 rpsB CJA_1110 - ribosomal protein S2 1083 53.38 0 1306564..1307436 + 290 192361153 tsf CJA_1111 - translation elongation factor Ts 1084 55.58 0 1307571..1309094 + 507 192362481 - CJA_1112 - hypothetical protein 1085 56.48 0 1309151..1309690 + 179 192359646 - CJA_1113 - hypothetical protein 1086 53.74 0 1309813..1310547 + 244 192360684 pyrH CJA_1114 - uridylate kinase 1087 53.64 0 1310652..1311104 + 150 192360685 frr CJA_1115 - ribosome recycling factor 1088 55.60 0 1311223..1311972 + 249 192361948 uppS CJA_1116 - undecaprenyl diphosphate synthase 1089 56.31 0 1311965..1312804 + 279 192359237 cdsA CJA_1117 - phosphatidate cytidylyltransferase 1090 56.64 0 1312813..1314009 + 398 192360022 dxr CJA_1118 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1091 52.77 0 1314036..1315409 + 457 192359199 - CJA_1119 - putative membrane-associated zinc metalloprotease 1092 48.77 0 1315480..1318122 + 880 192359801 - CJA_1120 - outer membrane protein, bacterial surface antigen family 1093 48.62 0 1318239..1318709 + 156 192359665 - CJA_1121 - putative outer membrane protein OmpH 1094 54.09 0 1318728..1319753 + 341 192360259 lpxD CJA_1122 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1095 46.80 0 1319788..1320225 + 145 192359935 fabZ CJA_1123 - beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 1096 49.16 0 1320300..1321070 + 256 192362392 lpxA CJA_1124 - acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 1097 50.91 0 1321138..1322292 + 384 192362074 lpx19A CJA_1125 - lipid-A-disaccharide synthase, putative, lpx19A 1098 52.36 0 1322289..1322903 + 204 192358895 rnhB CJA_1126 - ribonuclease HII 1099 53.03 0 1322930..1326463 + 1177 192360327 dnaE CJA_1127 - DNA polymerase III, alpha subunit 1100 45.61 -1 1326631..1327086 + 151 192360989 - CJA_1128 - CBS domain protein 1101 54.01 0 1327453..1328400 + 315 192361884 accA CJA_1129 - acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 1102 33.33 -2 1328634..1328726 + 30 192358980 - CJA_1130 - hypothetical protein 1103 57.88 +1 1328865..1330025 - 386 192359218 lldD CJA_1131 - L-lactate dehydrogenase 1104 56.06 0 1330234..1331544 + 436 192361229 fucP CJA_1132 - L-fucose permease 1105 60.30 +1 1331541..1332419 + 292 192362289 - CJA_1133 - Amidohydrolase family superfamily 1106 56.24 0 1332517..1333341 + 274 192359551 kdgR CJA_1134 - transcriptional regulator kdgR 1107 59.75 +1 1333537..1334649 + 370 192359521 - CJA_1135 - D-threo-aldose 1-dehydrogenase-like protein 1108 53.74 0 1334646..1334993 + 115 192360589 - CJA_1136 - hydrolase, UxaA family 1109 55.01 0 1334990..1336207 + 405 192360842 uxaA CJA_1137 - hydrolase, UxaA family 1110 52.40 0 1336281..1337009 + 242 192361927 - CJA_1138 - oxidoreductase UCPA 1111 52.72 0 1337034..1337879 + 281 192362262 - CJA_1139 - putative fumarylacetoacetate hydrolase family protein 1112 51.87 0 1337925..1341134 + 1069 192359054 cel3D CJA_1140 - putative 1,4-beta-D-glucan glucohydrolase cel3D 1113 47.15 0 1341418..1341909 + 163 192359038 - CJA_1141 - hypothetical protein 1114 49.62 0 1342050..1343780 + 576 192360106 - CJA_1142 - OmpA family protein 1115 45.97 -1 1343825..1344196 - 123 192361218 - CJA_1143 - hypothetical protein 52.09 MEAN 5.42 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0