version 1.0
Campylobacter hominis ATCC BAA-381, complete genome - 1..1711273 1682 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1498 35.92 0 1522763..1523188 + 141 154148530 rplM CHAB381_1597 - 50S ribosomal protein L13 1499 40.77 +1 1523191..1523580 + 129 154149095 rpsI CHAB381_1598 - 30S ribosomal protein S9 1500 37.62 +1 1523676..1524677 + 333 154147928 - CHAB381_1599 - outer membrane fibronectin-binding protein 1501 29.97 0 1524744..1525397 + 217 154148355 - CHAB381_1600 - pyrophosphatase PpaX 1502 38.63 +1 1525472..1529023 + 1183 154149287 nifJ CHAB381_1601 - pyruvate:ferredoxin (flavodoxin) oxidoreductase 1503 30.34 0 1529560..1530027 + 155 154148698 - CHAB381_1602 - cytochrome c553 1504 32.58 0 1530866..1530997 - 43 154148944 - CHAB381_1603 - hypothetical protein 1505 17.95 -2 1531244..1531399 + 51 154148703 - CHAB381_1604 - hypothetical protein 1506 22.80 -1 1531594..1532058 - 154 154149513 - CHAB381_1605 - putative secy-independent transporter protein 1507 36.78 0 1532159..1532419 - 86 154148419 - CHAB381_1606 - hypothetical protein 1508 29.63 0 1532420..1532554 - 44 154149375 - CHAB381_1607 - hypothetical protein 1509 37.78 +1 1532520..1532654 - 44 154148272 - CHAB381_1608 - hypothetical protein 1510 38.62 +1 1532700..1533683 - 327 154149314 - CHAB381_1609 - thiamine biosynthesis protein:ExsB 1511 33.45 0 1533680..1535326 - 548 154148103 dnaG CHAB381_1610 - DNA primase 1512 32.75 0 1535384..1536403 + 339 154149042 - CHAB381_1611 - TPR repeat-containing protein 1513 39.67 +1 1536381..1536806 + 141 154149229 rnhA CHAB381_1612 - ribonuclease H 1514 34.67 0 1536810..1537481 + 223 154148336 rnc CHAB381_1613 - ribonuclease III 1515 18.43 -2 1537478..1537732 + 84 154149303 - CHAB381_1614 - hypothetical protein 1516 40.64 +1 1537749..1539131 + 460 154148549 glcD CHAB381_1615 - glycolate oxidase, subunit GlcD 1517 36.22 0 1539425..1540705 + 426 154149396 - CHAB381_1616 - iron-sulfur cluster-binding domain-containing protein 1518 35.02 0 1540710..1541600 + 296 154148080 - CHAB381_1617 - transporter 1519 38.11 +1 1542007..1543074 - 355 154149107 prfA CHAB381_1618 - peptide chain release factor 1 1520 35.96 0 1543075..1543341 - 88 154147916 rpsT CHAB381_1619 - 30S ribosomal protein S20 1521 38.14 +1 1543462..1545291 - 609 154148330 - CHAB381_1620 - biotin/lipoyl attachment 1522 35.32 0 1545342..1546697 - 451 154148158 - CHAB381_1621 - trap dicarboxylate transporter, dctm subunit 1523 33.15 0 1546699..1547253 - 184 154148709 - CHAB381_1622 - tripartite ATP-independent periplasmic transporter, DctQ component 1524 34.26 0 1547417..1548064 + 215 154149535 - CHAB381_1623 - disulfide bond formation protein B 1525 35.74 0 1548146..1549351 + 401 154148603 - CHAB381_1624 - NADH dehydrogenase ndh 1526 33.16 0 1549728..1550318 - 196 154149304 - CHAB381_1625 - uridine diphosphate glucose pyrophosphatase 1527 36.48 0 1550303..1551667 - 454 154149089 mgtE CHAB381_1626 - magnesium transporter 1528 31.27 0 1551678..1552838 - 386 154149492 - CHAB381_1627 - M24/M37 family peptidase 1529 36.81 0 1552960..1553679 + 239 154148922 - CHAB381_1628 - hypothetical protein 1530 33.47 0 1553682..1554437 + 251 154148197 xth CHAB381_1629 - exodeoxyribonuclease III 1531 32.74 0 1554535..1555371 + 278 154149153 - CHAB381_1630 - universal stress protein 1532 35.19 0 1555390..1556955 + 521 154148399 - CHAB381_1631 - phosphate transporter 1533 30.03 0 1557396..1557698 - 100 154148237 - CHAB381_1632 - antibiotic biosynthesis monooxygenase 1534 34.61 0 1557736..1558284 - 182 154147989 - CHAB381_1633 - protein ThiJ 1535 35.93 0 1558414..1559760 + 448 154148988 - CHAB381_1634 - malate:quinone oxidoreductase (malate dehydrogenase[acceptor]) (MQO) 1536 37.11 +1 1559865..1561319 + 484 154148203 pyk CHAB381_1635 - pyruvate kinase 1537 24.56 -1 1561605..1561718 - 37 154149035 - CHAB381_1636 - hypothetical protein 1538 35.63 0 1561919..1562527 - 202 154148124 hisG CHAB381_1637 - ATP phosphoribosyltransferase catalytic subunit 1539 32.53 0 1562527..1563147 - 206 154149430 - CHAB381_1638 - pantothenate kinase 1540 24.62 -1 1563134..1563466 - 110 154148331 - CHAB381_1639 - hypothetical protein 1541 33.53 0 1563456..1564472 - 338 154147970 - CHAB381_1640 - hypothetical protein 1542 25.94 -1 1564469..1565077 - 202 154148716 - CHAB381_1641 - hypothetical protein 1543 30.61 0 1565153..1565446 + 97 154148209 gatC CHAB381_1642 - glutamyl-tRNA(Gln) amidotransferase, C subunit 1544 36.19 0 1565458..1566543 + 361 154149111 pilT CHAB381_1643 - twitching motility protein PilT 1545 32.42 0 1566543..1567199 + 218 154149533 cvpA CHAB381_1644 - CvpA family protein 1546 29.27 0 1567209..1567676 + 155 154148571 - CHAB381_1645 - ferric uptake regulation protein (ferric uptake regulator) 1547 34.07 0 1567676..1569175 + 499 154148211 lysS CHAB381_1646 - lysyl-tRNA synthetase 1548 36.62 0 1569178..1570425 + 415 154149300 glyA CHAB381_1647 - serine hydroxymethyltransferase 1549 30.57 0 1570511..1571452 + 313 154148074 - CHAB381_1648 - hypothetical protein 1550 31.31 0 1571452..1572240 + 262 154148735 aroE CHAB381_1649 - shikimate 5-dehydrogenase 1551 34.43 0 1573814..1574362 - 182 154148590 - CHAB381_1654 - membrane protein 1552 26.51 -1 1574433..1575077 + 214 154148081 - CHAB381_1655 - hypothetical protein 1553 33.66 0 1575074..1575997 + 307 154148404 - CHAB381_1656 - permeases of the drug/metabolite transporter 1554 36.58 0 1576401..1577447 + 348 154148398 ansB CHAB381_1657 - L-asparaginase II 1555 39.21 +1 1578714..1580789 - 691 154149329 fusA CHAB381_1658 - elongation factor G 1556 35.67 0 1580799..1581269 - 156 154148658 rpsG CHAB381_1659 - 30S ribosomal protein S7 1557 39.47 +1 1581341..1581715 - 124 154148589 rpsL CHAB381_1660 - 30S ribosomal protein S12 1558 27.07 0 1581805..1582203 - 132 154149460 - CHAB381_1661 - DoxX 1559 37.33 +1 1590978..1591352 - 124 154149202 rplL CHAB381_1664 - 50S ribosomal protein L7/L12 1560 33.12 0 1591366..1591839 - 157 154148718 - CHAB381_1665 - 50S ribosomal protein L10 1561 32.62 0 1591940..1592641 - 233 154148543 rplA CHAB381_1666 - 50S ribosomal protein L1 1562 35.22 0 1592696..1593118 - 140 154149278 rplK CHAB381_1667 - 50S ribosomal protein L11 1563 34.27 0 1593138..1593668 - 176 154148460 nusG CHAB381_1668 - transcription antitermination protein NusG 1564 28.33 0 1593678..1593857 - 59 154148329 secE CHAB381_1669 - preprotein translocase subunit SecE 1565 20.47 -2 1593964..1594134 - 56 154149108 rpmG CHAB381_1671 - 50S ribosomal protein L33 1566 37.75 +1 1594183..1595382 - 399 154148153 tuf CHAB381_1672 - elongation factor Tu 1567 32.86 0 1596108..1596530 - 140 154148890 - CHAB381_1677 - hypothetical protein 1568 34.16 0 1596523..1596885 - 120 154148776 rbfA CHAB381_1678 - ribosome-binding factor A 1569 35.56 0 1596882..1599626 - 914 154147969 - CHAB381_1679 - translation initiation factor IF-2 1570 26.96 0 1599616..1599819 - 67 154148555 - CHAB381_1680 - hypothetical protein 1571 33.33 0 1599839..1600717 - 292 154149485 thrB CHAB381_1681 - homoserine kinase 1572 31.48 0 1600727..1601158 - 143 154148093 - CHAB381_1682 - hypothetical protein 1573 34.35 0 1601189..1602073 - 294 154149276 lpxC CHAB381_1683 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 1574 32.75 0 1602120..1603481 - 453 154148778 - CHAB381_1684 - peptidase M23B 1575 36.22 0 1603547..1604377 - 276 154148118 - CHAB381_1685 - prephenate dehydrogenase 1576 35.60 0 1604453..1606702 + 749 154148540 yaeT CHAB381_1686 - outer membrane protein assembly complex, YaeT protein 1577 20.63 -2 1606753..1606878 - 41 154147909 - CHAB381_1687 - hypothetical protein 1578 33.51 0 1606986..1609187 - 733 154149540 - CHAB381_1688 - recombination and DNA strand exchange inhibitor protein 1579 27.35 0 1609184..1609534 - 116 154148583 - CHAB381_1689 - hypothetical protein 1580 34.86 0 1609531..1610841 - 436 154149343 murC CHAB381_1690 - UDP-N-acetylmuramate--L-alanine ligase 1581 33.25 0 1611002..1612222 + 406 154148532 - CHAB381_1691 - hypothetical protein 1582 35.62 0 1612317..1613495 + 392 154148255 - CHAB381_1692 - hypothetical protein 1583 29.32 0 1613567..1614364 + 265 154148335 - CHAB381_1693 - putative beta-lactamase HcpC (cysteine-richprotein C) 1584 36.00 0 1614607..1614981 + 124 154148023 - CHAB381_1694 - putative endoribonuclease L-PSP 1585 33.33 0 1615299..1616657 - 452 154148980 hemN CHAB381_1695 - coproporphyrinogen III oxidase 1586 30.79 0 1616657..1617127 - 156 154148522 - CHAB381_1696 - hypothetical protein 1587 36.59 0 1617127..1618047 - 306 154149503 argF CHAB381_1697 - ornithine carbamoyltransferase 1588 39.16 +1 1618059..1619036 - 325 154148310 hemB CHAB381_1698 - delta-aminolevulinic acid dehydratase 1589 32.99 0 1619102..1619683 + 193 154149328 ribA CHAB381_1699 - GTP cyclohydrolase II 1590 31.70 0 1619664..1620215 + 183 154148362 gidB CHAB381_1700 - methyltransferase GidB 1591 29.90 0 1620205..1620408 + 67 154148985 - CHAB381_1701 - hypothetical protein 1592 29.80 0 1620405..1620857 + 150 154148483 - CHAB381_1702 - hypothetical protein 1593 28.33 0 1621139..1621258 + 39 154149495 - CHAB381_1703 - hypothetical protein 1594 34.83 0 1621455..1621922 - 155 154148601 - CHAB381_1704 - hypothetical protein 1595 28.68 0 1621919..1622047 - 42 154148077 - CHAB381_1705 - hypothetical protein 1596 30.77 0 1622152..1622385 - 77 154148808 - CHAB381_1706 - hypothetical protein 1597 35.76 0 1622462..1624435 + 657 154148242 uvrB CHAB381_1707 - excinuclease ABC subunit B 31.82 MEAN 5.24 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0