version 1.0
Campylobacter concisus 13826, complete genome - 1..2052007 1929 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 954 48.11 +1 1031938..1032783 - 281 157164572 - CCC13826_1293 - 2-oxoglutarate-acceptor oxidoreductase subunit OorB 955 44.47 +1 1032773..1033903 - 376 157164286 - CCC13826_1294 - 2-oxoglutarate-acceptor oxidoreductase subunit OorA 956 50.32 +2 1033900..1034211 - 103 157164733 - CCC13826_1295 - 2-oxoglutarate-acceptor oxidoreductase subunit OorD 957 43.96 0 1034220..1035113 - 297 157165072 - CCC13826_2254 - malate dehydrogenase 958 41.70 0 1035117..1037291 - 724 157164999 - CCC13826_1088 - monomeric isocitrate dehydrogenase 959 42.22 0 1037343..1038287 - 314 157165543 - CCC13826_1089 - hypothetical protein 960 38.81 0 1038361..1040826 + 821 157163883 - CCC13826_1090 - hypothetical protein 961 31.64 -1 1040894..1041307 - 137 157164413 - CCC13826_1091 - ATPase 962 44.15 0 1041500..1041841 - 113 157165308 hypA CCC13826_1092 - hydrogenase nickel insertion protein HypA 963 45.82 +1 1041841..1042833 - 330 157165645 hypE CCC13826_1093 - hydrogenase expression/formation protein HypE 964 45.82 +1 1042842..1043930 - 362 157164117 hypD CCC13826_1094 - hydrogenase expression/formation protein HypD 965 44.17 0 1043930..1044169 - 79 157165680 hypC CCC13826_1095 - hydrogenase assembly chaperone HypC/HupF 966 44.65 +1 1044169..1044981 - 270 157165110 hypB CCC13826_1096 - hydrogenase accessory protein HypB 967 35.79 0 1045106..1045756 - 216 157164555 - CCC13826_1097 - hypothetical protein 968 41.81 0 1045753..1047015 - 420 157165654 - CCC13826_1098 - hypothetical protein 969 39.22 0 1047129..1047332 + 67 157164221 - CCC13826_2255 - hypothetical protein 970 40.82 0 1047378..1047791 - 137 157164777 - CCC13826_0355 - nickel responsive regulator 971 38.86 0 1047837..1050062 - 741 157165419 hypF CCC13826_0356 - [NiFe] hydrogenase maturation protein HypF 972 38.63 0 1050046..1051518 - 490 157164024 - CCC13826_0097 - hypothetical protein 973 41.62 0 1051515..1052057 - 180 157164536 - CCC13826_0098 - hydrogenase maturation protease HydD 974 43.34 0 1052747..1054465 - 572 157164490 pabC CCC13826_0100 - aminodeoxychorismate lyase 975 44.03 0 1054475..1055680 - 401 157164810 - CCC13826_0101 - putative periplasmic protein 976 43.79 0 1055962..1056669 - 235 157165376 flgH CCC13826_0102 - flagellar basal body L-ring protein 977 40.86 0 1056736..1058103 + 455 157164211 - CCC13826_0103 - hydrogenase expression/synthesis, HypA 978 46.15 +1 1058105..1059298 + 397 157164759 ackA CCC13826_0104 - acetate kinase 979 40.28 0 1059301..1060365 + 354 157165114 hypD CCC13826_0105 - hydrogenase expression/formation protein 980 39.47 0 1060412..1060639 + 75 157165637 - CCC13826_0106 - hypothetical protein 981 40.00 0 1061149..1061598 - 149 157165360 - CCC13826_0108 - hypothetical protein 982 39.51 0 1061595..1063019 - 474 157165282 - CCC13826_0109 - Mur ligase middle domain-containing protein 983 41.13 0 1063791..1064021 - 76 157165517 - CCC13826_0111 - hypothetical protein 984 43.60 0 1065138..1065692 - 184 157164589 ruvA CCC13826_0113 - holliday junction DNA helicase RuvA 985 41.72 0 1069133..1070527 + 464 157165603 cysS CCC13826_0116 - cysteinyl-tRNA synthetase 986 40.75 0 1070520..1072244 + 574 157165032 - CCC13826_0117 - lipid A export ATP-binding/permease protein MsbA 987 40.78 0 1072298..1073371 + 357 157164619 pyrD CCC13826_0118 - dihydroorotate dehydrogenase 2 988 38.73 0 1073383..1074624 + 413 157164188 - CCC13826_0119 - cytochrome c551 peroxidase (cytochrome cperoxidase) 989 43.85 0 1074627..1075520 + 297 157165445 dapA CCC13826_0120 - dihydrodipicolinate synthase 990 45.75 +1 1075520..1076308 + 262 157163926 - CCC13826_0121 - 7-alpha-hydroxysteroid dehydrogenase 991 42.33 0 1076286..1076885 + 199 157164350 pgsA CCC13826_0122 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 992 48.48 +1 1076888..1077904 + 338 157165001 - CCC13826_0123 - hypothetical protein 993 44.50 +1 1077926..1079035 + 369 157164061 rseP CCC13826_0124 - RIP metalloprotease RseP 994 40.53 0 1079032..1079670 + 212 157164475 - CCC13826_0125 - hypothetical protein 995 38.67 0 1079781..1080323 + 180 157165149 - CCC13826_0126 - putative cytochrome c-type haem-binding periplasmic protein 996 38.33 0 1080429..1081529 + 366 157165588 - CCC13826_0127 - flagellar basal-body rod protein FlgG (Distal rod protein) 997 33.04 -1 1088099..1089439 - 446 157165258 - CCC13826_1306 - hypothetical protein 998 39.47 0 1089436..1090005 - 189 157164921 yihK CCC13826_1307 - GTP-binding protein 999 43.74 0 1090608..1092125 - 505 157163995 - CCC13826_1309 - phosphodiesterase 1000 36.59 0 1092082..1092726 - 214 157164367 - CCC13826_1310 - 5,10-methenyltetrahydrofolate synthetase 1001 40.57 0 1092776..1093411 + 211 157165054 - CCC13826_1311 - transporter 1002 46.83 +1 1093411..1094277 + 288 157164288 ftsY CCC13826_1312 - signal recognition particle-docking protein FtsY 1003 36.09 0 1094270..1094632 + 120 157164718 nrfG CCC13826_1313 - TPR repeat-containing protein 1004 46.31 +1 1094607..1095947 + 446 157165585 radA CCC13826_1314 - DNA repair protein RadA 1005 30.95 -1 1095961..1096128 + 55 157165137 - CCC13826_1315 - hypothetical protein 1006 26.98 -2 1096166..1096291 - 41 157164990 - CCC13826_1316 - activator of (R)-2-hydroxyglutaryl-CoA dehydratase 1007 34.24 0 1096550..1097101 - 183 157164529 - CCC13826_1317 - 2-hydroxyglutaryl-CoA dehydratase, D-component 1008 28.96 -1 1097173..1097790 - 205 157164720 - CCC13826_1318 - hypothetical protein 1009 40.29 0 1097898..1098242 - 114 157164276 acpS CCC13826_1319 - holo-(acyl-carrier-protein) synthase 1010 39.66 0 1098239..1098775 - 178 157165347 fliL CCC13826_1320 - flagellar basal body-associated protein FliL 1011 44.51 +1 1098834..1099316 + 160 157165053 ybaK CCC13826_1378 - YbaK/ebsC protein 1012 34.95 0 1099305..1100291 - 328 157164918 - CCC13826_1377 - dihydrodipicolinate reductase (dhpr) 1013 44.83 +1 1100288..1100896 - 202 157165399 - CCC13826_1380 - thioredoxin reductase (trxr) 1014 38.59 0 1101014..1101679 + 221 157164198 - CCC13826_1381 - hypothetical protein 1015 40.48 0 1101790..1101999 - 69 157164471 - CCC13826_1382 - hypothetical protein 1016 31.77 -1 1102150..1102596 + 148 157164764 - CCC13826_1383 - FUR family transcriptional regulator 1017 33.02 -1 1102699..1103022 + 107 157165427 - CCC13826_1384 - hypothetical protein 1018 34.87 0 1103015..1103665 + 216 157165066 - CCC13826_1385 - aminotransferase 1019 35.33 0 1103658..1104008 + 116 157164660 - CCC13826_1386 - hypothetical protein 1020 41.27 0 1104018..1104332 + 104 157164455 - CCC13826_1387 - hypothetical protein 1021 39.56 0 1104332..1104652 + 106 157164086 - CCC13826_1388 - RNA methyltransferase 1022 44.56 +1 1104636..1106711 + 691 157165391 - CCC13826_1389 - tetrapyrrole methylase family protein 1023 42.64 0 1106729..1108189 + 486 157164880 - CCC13826_1390 - hypothetical protein 1024 39.92 0 1108200..1108457 + 85 157164683 - CCC13826_1391 - hypothetical protein 1025 41.37 0 1108459..1109292 + 277 157164151 modD CCC13826_1392 - ModD protein 1026 28.99 -1 1109817..1109954 + 45 157165715 - CCC13826_1393 - hypothetical protein 1027 34.04 0 1110019..1111989 - 656 157165318 - CCC13826_1394 - putative 6-pyruvoyl tetrahydrobiopterin synthase (ptps; ptp synthase) 1028 45.05 +1 1112312..1114879 - 855 157165471 - CCC13826_1395 - radical SAM domain-containing protein 1029 45.33 +1 1115124..1117631 - 835 157163991 - CCC13826_1396 - molybdenum cofactor biosynthesis protein A 1030 51.14 +2 1117787..1118005 + 72 157164546 - CCC13826_1397 - hypothetical protein 1031 42.01 0 1118231..1118806 - 191 157165180 - CCC13826_1398 - putative cytochrome C-type haem-binding periplasmic protein 1032 40.26 0 1118904..1119365 - 153 157164432 ubiA CCC13826_1399 - 4-hydroxybenzoate octaprenyltransferase 1033 42.10 0 1119378..1120301 - 307 157164957 - CCC13826_1400 - Dyp-type peroxidase 1034 38.36 0 1120325..1121020 - 231 157165146 - CCC13826_1401 - hypothetical protein 1035 42.45 0 1121077..1121910 - 277 157165612 - CCC13826_1402 - glyoxalase II 1036 44.31 0 1122003..1123214 - 403 157164582 ilvA CCC13826_1403 - threonine dehydratase 1037 40.85 0 1123236..1124339 - 367 157165225 trmA CCC13826_1404 - tRNA (uracil-5-)-methyltransferase 1038 44.31 0 1124342..1126045 - 567 157165174 - CCC13826_1405 - Na(+)/H(+) antiporter family protein 1039 43.11 0 1126055..1126801 - 248 157165617 - CCC13826_1406 - NAD-dependent epimerase/dehydratase family protein 1040 37.95 0 1126810..1128021 - 403 157164030 - CCC13826_1407 - hypothetical protein 1041 45.90 +1 1128058..1130643 - 861 157164502 acnB CCC13826_1408 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 1042 38.60 0 1130655..1131224 + 189 157164940 - CCC13826_1409 - methylated-DNA-[protein]-cysteine S-methyltransferase 1043 37.98 0 1131261..1134356 - 1031 157165392 - CCC13826_1410 - type I restriction enzyme EcoR124II R protein (R.EcoR124II) 1044 34.46 0 1134367..1135515 - 382 157164035 - CCC13826_1411 - type I restriction modification DNA specificity domain-containing protein 1045 41.63 0 1135512..1137065 - 517 157164462 hsdM CCC13826_1412 - type I restriction-modification system, M subunit 1046 43.89 0 1137076..1138089 - 337 157164935 - CCC13826_1413 - bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 1047 16.67 -2 1139091..1139210 - 39 157165343 - CCC13826_2263 - hypothetical protein 1048 34.78 0 1139203..1139895 + 230 157165727 - CCC13826_1418 - hypothetical protein 1049 34.75 0 1140066..1141832 + 588 157164308 - CCC13826_1419 - hypothetical protein 1050 37.47 0 1141843..1142784 + 313 157164626 csh CCC13826_1420 - CRISPR-associated protein, Csh2 family 1051 33.05 -1 1142786..1143496 + 236 157165168 cas CCC13826_1421 - CRISPR-associated protein Cas5 1052 34.88 0 1143474..1145675 + 733 157164437 cas CCC13826_1422 - CRISPR-associated helicase Cas3 domain-containing protein 1053 41.52 0 1145675..1146175 + 166 157164843 cas CCC13826_1423 - CRISPR-associated protein Cas4 39.18 MEAN 5.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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