version 1.0
Candidatus Pelagibacter ubique HTCC1062, complete genome - 1..1308759 1354 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 821 28.99 0 799422..800525 + 367 71083530 metC SAR11_0829 - cystathionine beta-lyase 822 30.71 0 800522..801742 + 406 71083531 - SAR11_0830 - major facilitator transporter 823 23.02 -1 801746..802909 + 387 71083532 pabB SAR11_0831 - para-aminobenzoate synthase component I 824 25.09 -1 802906..803463 + 185 71083533 trpG SAR11_0832 - anthranilate synthase component II (glutamine amido-transferase) 825 21.33 -1 803522..804196 + 224 71083534 - SAR11_0833 - aminotransferase 826 34.25 +1 804165..804599 + 144 71083535 apaG SAR11_0834 - diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase 827 33.96 +1 804704..805498 + 264 71083536 aprM SAR11_0835 - adenylylsulfate reductase membrane anchor 828 33.33 0 805519..805989 + 156 71083537 aprB SAR11_0836 - adenylyl-sulfate reductase chain B 829 37.58 +2 805989..807848 + 619 71083538 aprA SAR11_0837 - adenylylsulfate reductase 830 33.62 +1 807867..808217 + 116 71083539 - SAR11_0838 - hypothetical protein 831 25.19 0 808285..808419 + 44 71083540 - SAR11_0839 - transmembrane protein 832 30.01 0 808448..809530 + 360 71083541 - SAR11_0840 - putative transmembrane permease 833 28.21 0 809527..810600 - 357 71083542 yeiH SAR11_0841 - putative integral membrane protein 834 34.96 +1 810619..811785 - 388 71083543 garD SAR11_0842 - galactarate dehydratase 835 31.58 0 811791..812075 - 94 71083544 - SAR11_0843 - D-galactarate dehydratase/Altronate 836 36.53 +1 812187..813971 + 594 71083545 - SAR11_0844 - sulfoacetaldehyde acetyltransferase 837 29.71 0 814011..815612 + 533 71083546 smo SAR11_0845 - steroid monooxygenase 838 30.93 0 815628..816377 + 249 71083547 - SAR11_0846 - short chain dehydrogenase 839 30.88 0 816382..817686 + 434 71083548 - SAR11_0847 - glycine/D-amino acid oxidase deaminating 840 27.20 0 817687..820215 - 842 71083549 - SAR11_0848 - ABC transporter 841 29.43 0 820208..820873 - 221 71083550 - SAR11_0850 - ABC transporter ATP-binding protein 842 29.76 0 820872..821486 + 204 71083551 - SAR11_0851 - arylesterase 843 31.17 0 821501..822793 + 430 71083552 - SAR11_0852 - homoserine dehydrogenase 844 33.85 +1 822790..823941 - 383 71083553 - SAR11_0853 - X-Pro dipeptidase 845 26.38 0 824061..824837 - 258 71083554 - SAR11_0854 - fumarylacetoacetate (FAA) hydrolase family protein 846 29.59 0 824837..825637 - 266 71083555 - SAR11_0855 - peptidase 847 30.43 0 825622..826380 - 252 71083556 - SAR11_0856 - short chain dehydrogenase 848 30.63 0 826381..826971 - 196 71083557 - SAR11_0857 - TerC family integral membrane protein 849 33.27 0 826971..828566 - 531 71083558 betA SAR11_0858 - alcohol dehydrogenase (acceptor) 850 30.79 0 828655..829401 + 248 71083559 fbp SAR11_0859 - peptidylprolyl isomerase 851 24.94 -1 829409..829825 - 138 71083560 - SAR11_0860 - transcription regulator 852 33.46 +1 829950..830726 + 258 71083561 - SAR11_0861 - short chain dehydrogenase 853 34.39 +1 830726..832246 + 506 71083562 - SAR11_0862 - aldehyde dehydrogenase 854 33.44 +1 832239..833165 + 308 71083563 - SAR11_0863 - MmsB-like protein 855 37.27 +1 833343..834434 + 363 71083564 - SAR11_0864 - hypothetical protein 856 31.32 0 834637..835182 + 181 71083565 - SAR11_0865 - TRAP-type mannitol/chloroaromatic compound transport system 857 33.56 +1 835182..836507 + 441 71083566 - SAR11_0866 - mannitol transporter 858 29.47 0 836512..837366 - 284 71083567 yyaM SAR11_0867 - transport protein yyaM 859 26.75 0 837474..838931 + 485 71083568 pucI SAR11_0868 - permease for cytosine/purines 860 33.07 0 838936..839682 + 248 71083569 - SAR11_0869 - short chain dehydrogenase 861 28.43 0 839935..840525 + 196 71083570 - SAR11_0870 - hypothetical protein 862 28.99 0 840528..840665 - 45 71083571 - SAR11_0871 - transmembrane protein 863 26.29 0 840723..841148 + 141 71083572 ybgC SAR11_0872 - 4-hydroxybenzoyl-CoA thioesterase family protein 864 24.59 -1 841141..841815 - 224 71083573 ung SAR11_0873 - uracil-DNA glycosylase 865 24.09 -1 841818..842369 + 183 71083574 - SAR11_0874 - phosphoglycerate mutase family protein 866 23.19 -1 842388..842525 + 45 71083575 - SAR11_0875 - hypothetical protein 867 28.25 0 842603..842779 - 58 71083576 - SAR11_0876 - transmembrane protein 868 28.97 0 842772..843023 - 83 71083577 - SAR11_0877 - hypothetical protein 869 27.96 0 843226..844659 + 477 71083578 tig SAR11_0879 - trigger factor 870 31.86 0 844691..845302 + 203 71083579 clpP SAR11_0880 - ATP-dependent Clp protease proteolytic subunit 871 33.33 0 845394..846662 + 422 71083580 clpX SAR11_0881 - ATP-dependent protease ATP-binding subunit 872 30.27 0 846722..849106 + 794 71083581 lon SAR11_0882 - ATP-dependent protease La 873 30.08 0 849410..849778 + 122 71083582 nuoA SAR11_0883 - NADH dehydrogenase I chain A 874 34.67 +1 849790..850311 + 173 71083583 nuoB SAR11_0884 - NADH dehydrogenase subunit B 875 27.59 0 850317..850925 + 202 71083584 nuoC SAR11_0885 - NADH dehydrogenase I chain C 876 33.33 0 850909..852084 + 391 71083585 nuoD SAR11_0886 - NADH dehydrogenase subunit D 877 32.51 0 852084..852692 + 202 71083586 nuoE SAR11_0887 - NADH dehydrogenase I chain E 878 34.53 +1 852685..854016 + 443 71083587 nuoF SAR11_0888 - NADH dehydrogenase I subunit F 879 30.29 0 854009..856048 + 679 71083588 nuoG SAR11_0889 - NADH dehydrogenase subunit G 880 32.53 0 856052..857050 + 332 71083589 nuoH SAR11_0890 - NADH dehydrogenase I chain H 881 30.86 0 857053..857538 + 161 71083590 nuoI SAR11_0891 - NADH dehydrogenase subunit I 882 29.07 0 857541..858173 + 210 71083591 nuoJ SAR11_0892 - NADH dehydrogenase I chain J 883 26.60 0 858166..858477 + 103 71083592 nuoK SAR11_0893 - NADH dehydrogenase I chain K 884 29.41 0 858479..860392 + 637 71083593 nuoL SAR11_0894 - NADH dehydrogenase I chain L 885 31.26 0 860392..861885 + 497 71083594 nuoM SAR11_0896 - NADH dehydrogenase subunit M 886 28.81 0 861885..863300 + 471 71083595 nuoN SAR11_0897 - NADH dehydrogenase subunit N 887 21.28 -1 863300..863863 + 187 71083596 birA SAR11_0898 - biotin-protein ligase 888 24.36 -1 863860..864606 + 248 71083597 yacB SAR11_0899 - Bvg accessory factor 889 32.31 0 864609..866264 + 551 71083598 - SAR11_0900 - metallo-beta-lactamase family protein 890 23.98 -1 866265..866510 + 81 71083599 - SAR11_0901 - hypothetical protein 891 29.06 0 866512..867846 + 444 71083600 proS SAR11_0902 - prolyl-tRNA synthetase 892 26.20 0 867843..869075 + 410 71083601 ycfU SAR11_0903 - ABC transporter 893 25.91 0 869068..869754 + 228 71083602 ycfV SAR11_0905 - ABC transporter ATP-binding protein 894 28.86 0 869738..873154 + 1138 71083603 dnaE SAR11_0906 - DNA polymerase III alpha subunit 895 31.02 0 873284..874105 + 273 71083604 rpsB SAR11_0907 - 30S ribosomal protein S2 896 29.93 0 874107..874958 + 283 71083605 tsf SAR11_0908 - protein translation elongation factor Ts (EF-Ts) 897 28.44 0 874959..875510 + 183 71083606 rrf SAR11_0909 - ribosome recycling factor 898 23.60 -1 875507..876184 + 225 71083607 - SAR11_0910 - putative undecaprenyl diphosphate synthase 899 24.13 -1 876184..876846 + 220 71083608 cdsA SAR11_0911 - phosphatidate cytidylyltransferase 900 21.08 -1 876848..878014 + 388 71083609 yaeM SAR11_0912 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 901 26.68 0 878022..880259 + 745 71083610 omp1 SAR11_0913 - outer membrane protein omp1 902 19.24 -2 880259..880783 + 174 71083611 ompH SAR11_0914 - Outer membrane protein (OmpH-like) 903 33.79 +1 880790..881230 + 146 71083612 fabZ SAR11_0915 - (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase 904 27.62 0 881283..882263 + 326 71083613 lpxD SAR11_0916 - glucosamine N-acyltransferase 905 31.42 0 882260..883042 + 260 71083614 lpxA SAR11_0917 - acyl-[acyl carrier protein]--UDP-N- acetylglucosamine O-acyltransferase 906 23.79 -1 883044..883829 + 261 71083615 - SAR11_0918 - hypothetical protein 907 23.31 -1 883826..884962 + 378 71083616 lpxB SAR11_0919 - lipid-A-disaccharide synthase (lpxB) 908 27.62 0 884939..886339 - 466 71083617 gltX SAR11_0920 - glutamyl-tRNA synthetase 909 33.19 0 886362..887039 - 225 71083618 lexA SAR11_0921 - LexA repressor 910 25.38 0 887128..887919 - 263 71083619 trpC SAR11_0922 - indole-3-glycerol phosphate synthase/anthranilate isomerase 911 29.41 0 887912..888904 - 330 71083620 trpD SAR11_0923 - anthranilate phosphoribosyltransferase 912 25.69 0 888901..889476 - 191 71083621 trpGD SAR11_0924 - anthranilate synthase component II 913 27.29 0 889476..890930 - 484 71083622 trpE SAR11_0925 - anthranilate synthase component I-like protein 914 22.71 -1 890930..892351 - 473 71083623 - SAR11_0926 - SurA-like protein 915 25.76 0 892423..893148 + 241 71083624 tpiA SAR11_0927 - triosephosphate isomerase (TIM) 916 33.00 0 893154..893453 + 99 71083625 secG SAR11_0928 - preprotein translocase SecG subunit 917 30.81 0 893557..895455 + 632 71083626 - SAR11_0929 - hypothetical protein 918 32.11 0 895457..895702 - 81 71083627 - SAR11_0930 - transmembrane protein 919 31.58 0 895470..895697 + 75 71084063 - SAR11_0931 - putative transmembrane protein 920 36.16 +1 895754..917707 + 7317 71083628 - SAR11_0932 - hypothetical protein 29.30 MEAN 4.13 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.