version 1.0
Candidatus Pelagibacter ubique HTCC1062, complete genome - 1..1308759 1354 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 766 31.50 0 749914..750675 + 253 71083475 - SAR11_0773 - short chain dehydrogenase 767 34.57 +1 750690..752465 + 591 71083476 edd SAR11_0774 - dihydroxy-acid dehydratase 768 33.06 0 752477..753220 + 247 71083477 ucpA SAR11_0775 - oxidoreductase 769 30.96 0 753242..754084 + 280 71083478 hpcE SAR11_0776 - 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase/5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioate decarboxy 770 25.06 -1 754086..754967 + 293 71083479 gnl SAR11_0777 - gluconolactonase 771 32.64 0 755023..755892 + 289 71083480 gnd SAR11_0778 - 6-phosphogluconate dehydrogenase 772 30.85 0 755889..756734 + 281 71083481 hpaG SAR11_0779 - fumarylacetoacetate hydrolase family protein 773 28.53 0 756745..759432 + 895 71083482 ppc SAR11_0780 - phosphoenolpyruvate carboxylase 774 26.55 0 759434..760141 + 235 71083483 ccdA SAR11_0781 - holocytochrome-c synthase ccdA 775 29.21 0 760165..760746 + 193 71083484 azoR SAR11_0782 - [acyl-carrier-protein] phosphodiesterase 776 27.51 0 760746..761552 + 268 71083485 - SAR11_0783 - inositol monophosphatase family protein 777 30.12 0 761553..762113 + 186 71083486 - SAR11_0784 - hypothetical protein 778 28.12 0 762333..762677 + 114 71083487 - SAR11_0785 - hypothetical protein 779 32.73 0 763013..763345 - 110 71083488 qacH SAR11_0786 - multidrug resistance protein 780 30.65 0 763345..763680 - 111 71083489 qacH2 SAR11_0787 - quaternary ammonium compound-resistance protein qacH 781 35.24 +1 763730..763939 - 69 71083490 - SAR11_0788 - transmembrane protein 782 32.84 0 763955..764959 - 334 71083491 cysK SAR11_0789 - cysteine synthase A 783 34.54 +1 764959..765537 - 192 71083492 cysE SAR11_0790 - serine O-acetyltransferase 784 31.87 0 765612..766022 + 136 71083493 - SAR11_0791 - ring-cleaving dioxygenase 785 24.63 -1 766031..766501 + 156 71083494 - SAR11_0792 - hypothetical protein 786 30.14 0 766600..767475 + 291 71083495 - SAR11_0793 - hypothetical protein 787 40.10 +2 767594..768199 + 201 71083496 - SAR11_0794 - hypothetical protein 788 30.40 0 768206..769159 + 317 71083497 - SAR11_0795 - hypothetical protein 789 33.60 +1 769202..770683 + 493 71083498 aldH SAR11_0796 - aldehyde dehydrogenase (NAD) 790 36.03 +1 770785..771747 + 320 71083499 proX SAR11_0797 - hypothetical protein 791 31.24 0 771830..772879 + 349 71083500 proV SAR11_0798 - glycine betaine/L-proline transport ATP-binding protein 792 32.47 0 772872..774377 + 501 71083501 proW SAR11_0799 - glycine betaine/L-proline transport system permease protein 793 23.60 -1 774387..774992 + 201 71083502 yggA SAR11_0800 - lysine efflux pump 794 35.04 +1 774994..776280 - 428 71083503 hisD SAR11_0801 - histidinol dehydrogenase 795 31.23 0 776343..777149 - 268 71083504 pta SAR11_0802 - phosphate acetyltransferase (phosphotransacetylase) 796 33.95 +1 777304..778446 + 380 71083505 ephX1 SAR11_0803 - epoxide hydrolase 797 31.06 0 778447..779457 - 336 71083506 comC SAR11_0804 - malate/L-sulfolactate dehydrogenase multifunction enzyme 798 31.66 0 779476..781389 - 637 71083507 tauC SAR11_0805 - taurine uptake ABC transporter permease protein 799 33.96 +1 781391..782188 - 265 71083508 tauB SAR11_0806 - taurin uptake ABC transporter ATP-binding protein 800 35.56 +1 782276..783217 - 313 71083509 tauA SAR11_0807 - taurine transport system periplasmic protein 801 35.19 +1 783435..784781 + 448 71083510 bioA SAR11_0808 - beta alanine--pyruvate transaminase 802 36.21 +1 784825..785937 + 370 71083511 ald SAR11_0809 - alanine dehydrogenase 803 28.68 0 785951..786466 + 171 71083512 - SAR11_0810 - hypothetical protein 804 29.12 0 786575..788023 + 482 71083513 - SAR11_0811 - sodium/solute transporter family 805 30.24 0 788073..789008 + 311 71083514 yadG SAR11_0812 - ATP-binding component of ABC transporter 806 30.86 0 788998..789765 + 255 71083515 yadH SAR11_0813 - permease 807 28.12 0 789794..790177 - 127 71083516 cynT SAR11_0815 - carbonic anhydrase 808 31.75 0 790317..791450 + 377 71083517 - SAR11_0816 - membrane-associated zinc metalloprotease 809 32.97 0 791591..791866 + 91 71083518 hupA SAR11_0817 - non-specific DNA-binding protein HBsu 810 35.79 +1 792013..793314 + 433 71083519 amtB SAR11_0818 - ammonium transporter 811 25.85 0 793367..793834 - 155 71083520 bcp SAR11_0819 - bacterioferritin comigratory protein 812 22.35 -1 793837..794856 - 339 71083521 wbbA SAR11_0820 - putative rhamnosyltransferase 813 33.33 0 794910..795293 + 127 71083522 - SAR11_0821 - sulfide dehydrogenase 814 26.67 0 795290..795874 - 194 71083523 dsbA SAR11_0822 - 2-hydroxychromene-2-carboxylate isomerase family protein 815 25.74 0 795867..796340 - 157 71083524 - SAR11_0823 - putative integral membrane protein 816 27.39 0 796378..796932 + 184 71083525 recX SAR11_0824 - regulatory protein 817 21.09 -1 796924..797070 - 48 71083526 - SAR11_0825 - transmembrane protein 818 29.18 0 797070..797840 - 256 71083527 cysQ SAR11_0826 - cysQ protein 819 22.71 -1 797837..798043 - 68 71083528 - SAR11_0827 - hypothetical protein 820 29.93 0 798049..799164 + 371 71083529 trmU SAR11_0828 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 821 28.99 0 799422..800525 + 367 71083530 metC SAR11_0829 - cystathionine beta-lyase 822 30.71 0 800522..801742 + 406 71083531 - SAR11_0830 - major facilitator transporter 823 23.02 -1 801746..802909 + 387 71083532 pabB SAR11_0831 - para-aminobenzoate synthase component I 824 25.09 -1 802906..803463 + 185 71083533 trpG SAR11_0832 - anthranilate synthase component II (glutamine amido-transferase) 825 21.33 -1 803522..804196 + 224 71083534 - SAR11_0833 - aminotransferase 826 34.25 +1 804165..804599 + 144 71083535 apaG SAR11_0834 - diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase 827 33.96 +1 804704..805498 + 264 71083536 aprM SAR11_0835 - adenylylsulfate reductase membrane anchor 828 33.33 0 805519..805989 + 156 71083537 aprB SAR11_0836 - adenylyl-sulfate reductase chain B 829 37.58 +2 805989..807848 + 619 71083538 aprA SAR11_0837 - adenylylsulfate reductase 830 33.62 +1 807867..808217 + 116 71083539 - SAR11_0838 - hypothetical protein 831 25.19 0 808285..808419 + 44 71083540 - SAR11_0839 - transmembrane protein 832 30.01 0 808448..809530 + 360 71083541 - SAR11_0840 - putative transmembrane permease 833 28.21 0 809527..810600 - 357 71083542 yeiH SAR11_0841 - putative integral membrane protein 834 34.96 +1 810619..811785 - 388 71083543 garD SAR11_0842 - galactarate dehydratase 835 31.58 0 811791..812075 - 94 71083544 - SAR11_0843 - D-galactarate dehydratase/Altronate 836 36.53 +1 812187..813971 + 594 71083545 - SAR11_0844 - sulfoacetaldehyde acetyltransferase 837 29.71 0 814011..815612 + 533 71083546 smo SAR11_0845 - steroid monooxygenase 838 30.93 0 815628..816377 + 249 71083547 - SAR11_0846 - short chain dehydrogenase 839 30.88 0 816382..817686 + 434 71083548 - SAR11_0847 - glycine/D-amino acid oxidase deaminating 840 27.20 0 817687..820215 - 842 71083549 - SAR11_0848 - ABC transporter 841 29.43 0 820208..820873 - 221 71083550 - SAR11_0850 - ABC transporter ATP-binding protein 842 29.76 0 820872..821486 + 204 71083551 - SAR11_0851 - arylesterase 843 31.17 0 821501..822793 + 430 71083552 - SAR11_0852 - homoserine dehydrogenase 844 33.85 +1 822790..823941 - 383 71083553 - SAR11_0853 - X-Pro dipeptidase 845 26.38 0 824061..824837 - 258 71083554 - SAR11_0854 - fumarylacetoacetate (FAA) hydrolase family protein 846 29.59 0 824837..825637 - 266 71083555 - SAR11_0855 - peptidase 847 30.43 0 825622..826380 - 252 71083556 - SAR11_0856 - short chain dehydrogenase 848 30.63 0 826381..826971 - 196 71083557 - SAR11_0857 - TerC family integral membrane protein 849 33.27 0 826971..828566 - 531 71083558 betA SAR11_0858 - alcohol dehydrogenase (acceptor) 850 30.79 0 828655..829401 + 248 71083559 fbp SAR11_0859 - peptidylprolyl isomerase 851 24.94 -1 829409..829825 - 138 71083560 - SAR11_0860 - transcription regulator 852 33.46 +1 829950..830726 + 258 71083561 - SAR11_0861 - short chain dehydrogenase 853 34.39 +1 830726..832246 + 506 71083562 - SAR11_0862 - aldehyde dehydrogenase 854 33.44 +1 832239..833165 + 308 71083563 - SAR11_0863 - MmsB-like protein 855 37.27 +1 833343..834434 + 363 71083564 - SAR11_0864 - hypothetical protein 856 31.32 0 834637..835182 + 181 71083565 - SAR11_0865 - TRAP-type mannitol/chloroaromatic compound transport system 857 33.56 +1 835182..836507 + 441 71083566 - SAR11_0866 - mannitol transporter 858 29.47 0 836512..837366 - 284 71083567 yyaM SAR11_0867 - transport protein yyaM 859 26.75 0 837474..838931 + 485 71083568 pucI SAR11_0868 - permease for cytosine/purines 860 33.07 0 838936..839682 + 248 71083569 - SAR11_0869 - short chain dehydrogenase 861 28.43 0 839935..840525 + 196 71083570 - SAR11_0870 - hypothetical protein 862 28.99 0 840528..840665 - 45 71083571 - SAR11_0871 - transmembrane protein 863 26.29 0 840723..841148 + 141 71083572 ybgC SAR11_0872 - 4-hydroxybenzoyl-CoA thioesterase family protein 864 24.59 -1 841141..841815 - 224 71083573 ung SAR11_0873 - uracil-DNA glycosylase 865 24.09 -1 841818..842369 + 183 71083574 - SAR11_0874 - phosphoglycerate mutase family protein 29.30 MEAN 4.13 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.