version 1.0
Candidatus Pelagibacter ubique HTCC1062, complete genome - 1..1308759 1354 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 733 30.84 0 722987..724429 + 480 71083442 sufB SAR11_0739 - cysteine desulfurase activator complex subunit SufB 734 28.03 0 724429..725163 + 244 71083443 sufC SAR11_0740 - FeS assembly ATPase SufC 735 24.34 -1 725164..726408 + 414 71083444 sufD SAR11_0741 - FeS assembly protein sufD 736 30.54 0 726405..727622 + 405 71083445 csdB SAR11_0742 - selenocysteine lyase chain A 737 27.39 0 727622..728092 + 156 71083446 sufE SAR11_0743 - putative nifU-like protein 738 32.32 0 728096..728392 + 98 71083447 paaD SAR11_0744 - phenylacetic acid degradation protein 739 33.33 0 728392..728724 + 110 71083448 hesB SAR11_0745 - hesB protein 740 29.24 0 728783..728953 + 56 71083449 - SAR11_0746 - hypothetical protein 741 33.48 +1 728960..730366 - 468 71083450 glnA SAR11_0747 - glutamine synthetase I 742 31.67 0 730513..730992 + 159 71083451 - SAR11_0748 - YbaK/prolyl-tRNA synthetase associated region 743 25.56 0 730989..731876 + 295 71083452 - SAR11_0749 - ABC transporter 744 30.03 0 731869..732777 - 302 71083453 mmuM SAR11_0750 - homocysteine S-methyltransferase 745 24.70 -1 732939..733529 - 196 71083454 - SAR11_0751 - hypothetical protein 746 30.39 0 733559..734305 - 248 71083455 - SAR11_0752 - transmembrane protein 747 34.13 +1 734324..734824 + 166 71083456 moaB SAR11_0754 - molybdopterin biosynthesis protein 748 31.71 0 734825..735070 - 81 71083457 - SAR11_0755 - hypothetical protein 749 35.07 +1 735368..736918 + 516 71083458 aldA SAR11_0756 - acetaldehyde dehydrogenase II (ACDH-II) 750 32.47 0 736964..737311 + 115 71083459 - SAR11_0757 - hypothetical protein 751 26.67 0 737308..737877 - 189 71083460 yedZ SAR11_0758 - hypothetical protein 752 31.46 0 737902..738807 - 301 71083461 yedY SAR11_0759 - putative sulfite oxidase subunit YedY 753 26.80 0 738804..739247 - 147 71083462 moaE SAR11_0760 - molybdopterin biosynthesis protein E chain 754 24.81 -1 739247..739516 - 89 71083463 moaD SAR11_0761 - molybdopterin biosynthesis protein moaD 755 29.30 0 739519..740064 - 181 71083464 moaC SAR11_0762 - molybdopterin cofactor synthesis protein 756 28.80 0 740065..741057 - 330 71083465 moaA SAR11_0763 - molybdenum cofactor biosynthesis protein A 757 31.29 0 741093..741926 + 277 71083466 - SAR11_0764 - deoxygenase 758 37.61 +2 741963..742289 - 108 71083467 - SAR11_0765 - hypothetical protein 759 35.00 +1 742383..743825 + 480 71083468 gabD SAR11_0766 - succinate-semialdehyde dehydrogenase (NAD(P)) 760 32.40 0 743871..744617 + 248 71083469 - SAR11_0767 - short chain dehydrogenase 761 33.33 0 744621..745523 + 300 71083470 yajF SAR11_0768 - NAGC-like transcription regulator 762 38.49 +2 745724..746983 + 419 71083471 - SAR11_0769 - binding protein component of ABC sugar transporter 763 32.30 0 747047..747919 + 290 71083472 - SAR11_0770 - ABC-type sugar transport system 764 29.35 0 747909..748811 + 300 71083473 - SAR11_0771 - ABC-type sugar transport system 765 29.16 0 748813..749913 + 366 71083474 malK SAR11_0772 - sugar ABC transporter 766 31.50 0 749914..750675 + 253 71083475 - SAR11_0773 - short chain dehydrogenase 767 34.57 +1 750690..752465 + 591 71083476 edd SAR11_0774 - dihydroxy-acid dehydratase 768 33.06 0 752477..753220 + 247 71083477 ucpA SAR11_0775 - oxidoreductase 769 30.96 0 753242..754084 + 280 71083478 hpcE SAR11_0776 - 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase/5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioate decarboxy 770 25.06 -1 754086..754967 + 293 71083479 gnl SAR11_0777 - gluconolactonase 771 32.64 0 755023..755892 + 289 71083480 gnd SAR11_0778 - 6-phosphogluconate dehydrogenase 772 30.85 0 755889..756734 + 281 71083481 hpaG SAR11_0779 - fumarylacetoacetate hydrolase family protein 773 28.53 0 756745..759432 + 895 71083482 ppc SAR11_0780 - phosphoenolpyruvate carboxylase 774 26.55 0 759434..760141 + 235 71083483 ccdA SAR11_0781 - holocytochrome-c synthase ccdA 775 29.21 0 760165..760746 + 193 71083484 azoR SAR11_0782 - [acyl-carrier-protein] phosphodiesterase 776 27.51 0 760746..761552 + 268 71083485 - SAR11_0783 - inositol monophosphatase family protein 777 30.12 0 761553..762113 + 186 71083486 - SAR11_0784 - hypothetical protein 778 28.12 0 762333..762677 + 114 71083487 - SAR11_0785 - hypothetical protein 779 32.73 0 763013..763345 - 110 71083488 qacH SAR11_0786 - multidrug resistance protein 780 30.65 0 763345..763680 - 111 71083489 qacH2 SAR11_0787 - quaternary ammonium compound-resistance protein qacH 781 35.24 +1 763730..763939 - 69 71083490 - SAR11_0788 - transmembrane protein 782 32.84 0 763955..764959 - 334 71083491 cysK SAR11_0789 - cysteine synthase A 783 34.54 +1 764959..765537 - 192 71083492 cysE SAR11_0790 - serine O-acetyltransferase 784 31.87 0 765612..766022 + 136 71083493 - SAR11_0791 - ring-cleaving dioxygenase 785 24.63 -1 766031..766501 + 156 71083494 - SAR11_0792 - hypothetical protein 786 30.14 0 766600..767475 + 291 71083495 - SAR11_0793 - hypothetical protein 787 40.10 +2 767594..768199 + 201 71083496 - SAR11_0794 - hypothetical protein 788 30.40 0 768206..769159 + 317 71083497 - SAR11_0795 - hypothetical protein 789 33.60 +1 769202..770683 + 493 71083498 aldH SAR11_0796 - aldehyde dehydrogenase (NAD) 790 36.03 +1 770785..771747 + 320 71083499 proX SAR11_0797 - hypothetical protein 791 31.24 0 771830..772879 + 349 71083500 proV SAR11_0798 - glycine betaine/L-proline transport ATP-binding protein 792 32.47 0 772872..774377 + 501 71083501 proW SAR11_0799 - glycine betaine/L-proline transport system permease protein 793 23.60 -1 774387..774992 + 201 71083502 yggA SAR11_0800 - lysine efflux pump 794 35.04 +1 774994..776280 - 428 71083503 hisD SAR11_0801 - histidinol dehydrogenase 795 31.23 0 776343..777149 - 268 71083504 pta SAR11_0802 - phosphate acetyltransferase (phosphotransacetylase) 796 33.95 +1 777304..778446 + 380 71083505 ephX1 SAR11_0803 - epoxide hydrolase 797 31.06 0 778447..779457 - 336 71083506 comC SAR11_0804 - malate/L-sulfolactate dehydrogenase multifunction enzyme 798 31.66 0 779476..781389 - 637 71083507 tauC SAR11_0805 - taurine uptake ABC transporter permease protein 799 33.96 +1 781391..782188 - 265 71083508 tauB SAR11_0806 - taurin uptake ABC transporter ATP-binding protein 800 35.56 +1 782276..783217 - 313 71083509 tauA SAR11_0807 - taurine transport system periplasmic protein 801 35.19 +1 783435..784781 + 448 71083510 bioA SAR11_0808 - beta alanine--pyruvate transaminase 802 36.21 +1 784825..785937 + 370 71083511 ald SAR11_0809 - alanine dehydrogenase 803 28.68 0 785951..786466 + 171 71083512 - SAR11_0810 - hypothetical protein 804 29.12 0 786575..788023 + 482 71083513 - SAR11_0811 - sodium/solute transporter family 805 30.24 0 788073..789008 + 311 71083514 yadG SAR11_0812 - ATP-binding component of ABC transporter 806 30.86 0 788998..789765 + 255 71083515 yadH SAR11_0813 - permease 807 28.12 0 789794..790177 - 127 71083516 cynT SAR11_0815 - carbonic anhydrase 808 31.75 0 790317..791450 + 377 71083517 - SAR11_0816 - membrane-associated zinc metalloprotease 809 32.97 0 791591..791866 + 91 71083518 hupA SAR11_0817 - non-specific DNA-binding protein HBsu 810 35.79 +1 792013..793314 + 433 71083519 amtB SAR11_0818 - ammonium transporter 811 25.85 0 793367..793834 - 155 71083520 bcp SAR11_0819 - bacterioferritin comigratory protein 812 22.35 -1 793837..794856 - 339 71083521 wbbA SAR11_0820 - putative rhamnosyltransferase 813 33.33 0 794910..795293 + 127 71083522 - SAR11_0821 - sulfide dehydrogenase 814 26.67 0 795290..795874 - 194 71083523 dsbA SAR11_0822 - 2-hydroxychromene-2-carboxylate isomerase family protein 815 25.74 0 795867..796340 - 157 71083524 - SAR11_0823 - putative integral membrane protein 816 27.39 0 796378..796932 + 184 71083525 recX SAR11_0824 - regulatory protein 817 21.09 -1 796924..797070 - 48 71083526 - SAR11_0825 - transmembrane protein 818 29.18 0 797070..797840 - 256 71083527 cysQ SAR11_0826 - cysQ protein 819 22.71 -1 797837..798043 - 68 71083528 - SAR11_0827 - hypothetical protein 820 29.93 0 798049..799164 + 371 71083529 trmU SAR11_0828 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 821 28.99 0 799422..800525 + 367 71083530 metC SAR11_0829 - cystathionine beta-lyase 822 30.71 0 800522..801742 + 406 71083531 - SAR11_0830 - major facilitator transporter 823 23.02 -1 801746..802909 + 387 71083532 pabB SAR11_0831 - para-aminobenzoate synthase component I 824 25.09 -1 802906..803463 + 185 71083533 trpG SAR11_0832 - anthranilate synthase component II (glutamine amido-transferase) 825 21.33 -1 803522..804196 + 224 71083534 - SAR11_0833 - aminotransferase 826 34.25 +1 804165..804599 + 144 71083535 apaG SAR11_0834 - diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase 827 33.96 +1 804704..805498 + 264 71083536 aprM SAR11_0835 - adenylylsulfate reductase membrane anchor 828 33.33 0 805519..805989 + 156 71083537 aprB SAR11_0836 - adenylyl-sulfate reductase chain B 829 37.58 +2 805989..807848 + 619 71083538 aprA SAR11_0837 - adenylylsulfate reductase 830 33.62 +1 807867..808217 + 116 71083539 - SAR11_0838 - hypothetical protein 831 25.19 0 808285..808419 + 44 71083540 - SAR11_0839 - transmembrane protein 832 30.01 0 808448..809530 + 360 71083541 - SAR11_0840 - putative transmembrane permease 29.30 MEAN 4.13 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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