version 1.0
Candidatus Pelagibacter ubique HTCC1062, complete genome - 1..1308759 1354 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 137 30.00 0 144899..145258 - 119 71082846 - SAR11_0138 - transcriptional regulator 138 37.55 +1 145353..145589 + 78 71082847 - SAR11_0139 - putative glutamate synthetas 139 29.13 0 145619..145999 + 126 71082848 - SAR11_0140 - DoxD-like family protein 140 34.83 +1 146096..147634 + 512 71082849 - SAR11_0141 - ferredoxin-dependent glutamate synthase peptide 141 33.93 +1 147644..148483 + 279 71082850 - SAR11_0142 - pirin 142 33.23 0 148483..149457 + 324 71082851 qor SAR11_0143 - quinone oxidoreductase 143 29.88 0 149454..149858 - 134 71082852 - SAR11_0144 - hypothetical protein 144 26.97 0 149911..150774 + 287 71082853 ubiA SAR11_0145 - 4-hydroxybenzoate octaprenyltransferase 145 28.05 0 150774..152513 + 579 71082854 - SAR11_0147 - ABC transporter ATP-binding protein 146 23.91 -1 152513..153775 + 420 71082855 kdtA SAR11_0148 - 3-deoxy-D-manno-octulosonic-acid transferase 147 24.55 -1 153756..154700 + 314 71082856 lpxK SAR11_0149 - tetraacyldisaccharide 4'-kinase 148 24.39 -1 154687..155547 + 286 71082857 htrB SAR11_0151 - lipid A biosynthesis lauroyl acyltransferase 149 24.87 -1 155552..155740 - 62 71082858 - SAR11_0152 - hypothetical protein 150 29.15 0 155762..157027 + 421 71082859 purD SAR11_0153 - phosphoribosylamine--glycine ligase 151 23.81 -1 157024..157590 + 188 71082860 - SAR11_0154 - N6-adenine-specific methylase 152 22.48 -1 157582..158724 - 380 71082861 pgi SAR11_0155 - glucose-6-phosphate isomerase 153 26.25 0 158728..159066 - 112 71082862 - SAR11_0156 - hypothetical protein 154 24.35 -1 159167..159667 - 166 71082863 lspA SAR11_0157 - lipoprotein signal peptidase 155 30.65 0 159680..162397 - 905 71082864 ileS SAR11_0158 - isoleucyl-tRNA synthetase 156 23.64 -1 162399..163316 - 305 71082865 ribF SAR11_0159 - riboflavin biosynthesis protein 157 27.11 0 163320..164138 - 272 71082866 - SAR11_0160 - haloacid dehalogenase-like hydrolase 158 35.40 +1 164262..164552 + 96 71082867 groES SAR11_0161 - 10 kDa chaperonin 159 37.42 +1 164576..166240 + 554 71082868 groEL SAR11_0162 - 60 kDa chaperonin 160 23.68 -1 166322..166435 + 37 71082869 - SAR11_0163 - hypothetical protein 161 33.10 0 166432..168180 - 582 71082870 rlhE SAR11_0164 - ATP-dependent RNA helicase 162 33.61 +1 168376..170202 + 608 71082871 typA SAR11_0165 - GTP-binding protein 163 32.25 0 170199..170846 - 215 71082872 - SAR11_0166 - membrane protein 164 24.67 -1 170900..171580 + 226 71082873 - SAR11_0167 - hypothetical protein 165 25.93 0 171583..172554 - 323 71082874 - SAR11_0168 - amine oxidase 166 28.94 0 172551..173870 - 439 71082875 pmbA SAR11_0169 - protein for maturation of antibiotic MccB17 167 32.77 0 173876..175288 - 470 71082876 tldD SAR11_0170 - protein that suppresses inhibitory activity of CsrA 168 30.03 0 175399..175761 + 120 71082877 - SAR11_0171 - rhodanese-related sulfurtransferase 169 23.28 -1 175765..176112 + 115 71082878 - SAR11_0172 - hypothetical protein 170 28.18 0 176158..176700 + 180 71082879 - SAR11_0173 - 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase 171 26.11 0 176702..177877 - 391 71082880 - SAR11_0174 - hypothetical protein 172 29.94 0 177954..178838 - 294 71082881 - SAR11_0175 - dapA-like protein 173 22.33 -1 178883..179818 + 311 71082882 gmdA SAR11_0176 - GDP-mannose 4,6-dehydratase 174 26.09 0 179815..180753 + 312 71082883 - SAR11_0177 - heptosyltransferase 175 24.26 -1 180750..181256 - 168 71082884 - SAR11_0178 - heat shock protein 176 29.72 0 181274..183349 + 691 71082885 ptrB SAR11_0180 - oligopeptidase B 177 31.10 0 183448..183894 + 148 71082886 ibpA SAR11_0181 - heat shock protein a 178 27.78 0 183941..184246 - 101 71082887 - SAR11_0182 - hypothetical protein 179 35.32 +1 184378..185688 + 436 71082888 - SAR11_0183 - xanthine/uracil/vitamin C permease family protein 180 28.68 0 185722..186258 - 178 71082889 - SAR11_0184 - phosphoribosyltransferase 181 35.02 +1 186287..186583 + 98 71082890 - SAR11_0185 - hypothetical protein 182 28.80 0 186570..187142 - 190 71082891 tag SAR11_0186 - DNA-3-methyladenine glycosylase I 183 30.96 0 187198..188082 - 294 71082892 - SAR11_0187 - DMT family permease 184 29.50 0 188118..188561 + 147 71082893 msrB SAR11_0188 - peptide methionine sulfoxide reductase 185 28.04 0 188563..189375 + 270 71082894 sseA SAR11_0189 - thiosulfate sulfurtransferase 186 27.13 0 189379..190248 + 289 71082895 yhil SAR11_0190 - HlyD family-like protein 187 31.25 0 190248..193370 + 1040 71082896 - SAR11_0191 - AcrB/AcrD/AcrF family protein (acriflavin resistance) 188 28.33 0 193367..193966 - 199 71082897 - SAR11_0192 - soluble lytic murein transglycosylase 189 23.33 -1 193953..194342 - 129 71082898 - SAR11_1720 - unknown membrane protein 190 29.85 0 194401..195117 + 238 71082899 gpmA SAR11_0193 - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 191 21.88 -1 195106..195795 - 229 71082900 - SAR11_0194 - nucleotidyltransferase family protein 192 23.50 -1 195792..196757 - 321 71082901 - SAR11_0195 - phosphotransferase enzyme family protein 193 27.67 0 196761..197219 - 152 71082902 - SAR11_0196 - cell division control protein 6 194 34.50 +1 197203..198489 - 428 71082903 ahcY SAR11_0197 - S-adenosyl-L-homocysteine hydrolase 195 24.63 -1 198533..200071 - 512 71082904 chvG SAR11_0198 - two-component sensor histidine kinase 196 29.66 0 200071..200778 - 235 71082905 chvI SAR11_0199 - two-component system response regulator 197 29.48 0 200829..203603 - 924 71082906 polA SAR11_0200 - DNA polymerase I 198 29.57 0 203654..204583 + 309 71082907 - SAR11_0201 - YadG-like ABC transporter protein 199 27.36 0 204616..205167 + 183 71082908 - SAR11_0202 - biotin synthase 200 35.28 +1 205160..205723 - 187 71082909 - SAR11_0203 - response regulator 201 30.03 0 205872..207050 + 392 71082910 speC SAR11_0204 - lysine/ornithine decarboxylase 202 30.94 0 207050..208093 + 347 71082911 dys2 SAR11_0205 - deoxyhypusine synthase-like protein 203 28.65 0 208096..208971 + 291 71082912 speB1 SAR11_0206 - arginase 204 29.37 0 208968..209522 - 184 71082913 yhhQ SAR11_0207 - hypothetical protein 205 26.23 0 209522..209845 - 107 71082914 rpmB SAR11_0208 - 50S ribosomal protein L28 206 30.20 0 209899..210951 - 350 71082915 pyrD SAR11_0209 - dihydroorotate dehydrogenase 207 29.78 0 210951..212528 - 525 71082916 lysK SAR11_0210 - lysyl-tRNA synthetase 208 27.87 0 212604..214049 + 481 71082917 trkH SAR11_0211 - potassium uptake protein 209 33.41 0 214052..215428 + 458 71082918 ampG SAR11_0213 - muropeptide permease 210 21.15 -1 215418..216164 + 248 71082919 - SAR11_0214 - hypothetical protein 211 23.75 -1 216161..217057 - 298 71082920 tyrA SAR11_0215 - prephenate dehydrogenase 212 26.96 0 217060..218142 - 360 71082921 hisC SAR11_0216 - histidinol-phosphate aminotransferase 213 31.19 0 218334..219452 + 372 71082922 metX SAR11_0217 - homoserine O-acetyltransferase 214 26.13 0 219455..220051 + 198 71082923 metW SAR11_0218 - methionine biosynthesis protein 215 29.17 0 220052..220771 + 239 71082924 gloB SAR11_0219 - hydroxyacylglutathione hydrolase cytoplasmic 216 29.14 0 220837..221241 + 134 71082925 rplU SAR11_0220 - 50S ribosomal protein L21 217 38.04 +2 221254..221508 + 84 71082926 rpmA SAR11_0221 - 50S ribosomal protein L27 218 33.03 0 221539..222522 + 327 71082927 obgE SAR11_0222 - GTPase ObgE 219 29.54 0 222512..223618 + 368 71082928 proB SAR11_0223 - glutamate 5-kinase 220 29.74 0 223620..224870 + 416 71082929 proA SAR11_0224 - gamma-glutamyl phosphate reductase 221 23.57 -1 224851..225393 + 180 71082930 ybeN SAR11_0225 - nicotinate-nucleotide adenylyltransferase 222 27.35 0 225411..225761 + 116 71082931 ybeB SAR11_0226 - iojap-related protein 223 30.61 0 225758..226897 + 379 71082932 ctpA SAR11_0227 - tail-specific proteinase 224 29.77 0 226898..227374 + 158 71082933 nudH SAR11_0228 - (di)nucleoside polyphosphate hydrolase 225 27.23 0 227367..227759 - 130 71082934 atpC SAR11_0229 - ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) 226 37.35 +1 227759..229177 - 472 71082935 atpD SAR11_0230 - F0F1 ATP synthase subunit beta 227 30.82 0 229180..230055 - 291 71082936 atpG SAR11_0231 - F0F1 ATP synthase subunit gamma 228 34.77 +1 230059..231594 - 511 71082937 atpA SAR11_0232 - F0F1 ATP synthase subunit alpha 229 28.14 0 231595..232152 - 185 71082938 atpH SAR11_0233 - H+-transporting two-sector ATPase (F0F1-type ATP synthase) delta chain 230 28.17 0 232263..234218 - 651 71082939 priA SAR11_0234 - primosomal protein N 231 32.41 0 234241..235641 - 466 71082940 pdhD SAR11_0235 - dihydrolipoyl dehydrogenase 232 31.38 0 235642..236919 - 425 71082941 sucB SAR11_0236 - 2-oxoglutarate dehydrogenase complex E2 component 233 31.03 0 236922..239825 - 967 71082942 kgd SAR11_0237 - alpha-ketoglutarate decarboxylase 234 34.82 +1 239860..240735 - 291 71082943 sucD SAR11_0238 - succinyl-CoA synthetase alpha chain (SCS-alpha) 235 31.96 0 240737..241897 - 386 71082944 sucC SAR11_0239 - succinyl-CoA synthetase beta chain (SCS-beta) 236 33.23 0 241897..242859 - 320 71082945 mdh SAR11_0240 - malate dehydrogenase 29.30 MEAN 4.13 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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