version 1.0
Candidatus Pelagibacter ubique HTCC1062, complete genome - 1..1308759 1354 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1225 31.86 0 1187347..1187955 - 202 71083933 folE SAR11_1245 - GTP cyclohydrolase I 1226 30.88 0 1188012..1188500 + 162 71083934 hisI SAR11_1246 - phosphoribosyl-AMP cyclohydrolase 1227 36.00 +1 1188501..1188875 + 124 71083935 - SAR11_1247 - hypothetical protein 1228 26.75 0 1188881..1189852 - 323 71083936 - SAR11_1248 - hypothetical protein 1229 31.96 0 1189957..1190175 + 72 71083937 - SAR11_1249 - hypothetical protein 1230 32.77 0 1190176..1191780 - 534 71083938 - SAR11_1250 - electron transfer flavoprotein-ubiquinone oxidoreductase 1231 33.33 0 1191819..1192772 - 317 71083939 etfA SAR11_1251 - electron transfer flavoprotein alpha-subunit 1232 33.60 +1 1192772..1193521 - 249 71083940 etfB SAR11_1252 - electron transfer flavoprotein beta-chain 1233 35.31 +1 1193521..1195953 - 810 71083941 - SAR11_1253 - dimethylglycine dehydrogenase 1234 32.92 0 1196013..1196492 - 159 71083942 - SAR11_1254 - hypothetical protein 1235 30.53 0 1196458..1197027 - 189 71083943 - SAR11_1255 - putative NADPH-quinone reductase 1236 23.74 -1 1197066..1197263 + 65 71083944 - SAR11_1256 - hypothetical protein 1237 28.61 0 1197221..1197643 - 140 71083945 - SAR11_1257 - hypothetical protein 1238 27.86 0 1197640..1198059 - 139 71083946 yeeE SAR11_1258 - hypothetical protein 1239 29.68 0 1198060..1198497 - 145 71083947 met17 SAR11_1259 - unknown CoA binding protein 1240 29.90 0 1198497..1199282 - 261 71083948 ydbS SAR11_1260 - enoyl-CoA hydratase 1241 30.93 0 1199266..1199640 - 124 71083949 - SAR11_1261 - cytidylyltransferase 1242 32.84 0 1199640..1200047 - 135 71083950 cysC SAR11_1262 - adenylylsulfate kinase 1243 33.58 +1 1200049..1201242 - 397 71083951 - SAR11_1263 - dioxygenase alpha chain 1244 35.53 +1 1201343..1202071 + 242 71083952 metF SAR11_1264 - methylenetetrahydrofolate reductase 1245 37.23 +1 1202064..1203422 + 452 71083953 - SAR11_1265 - putative aminomethyltransferase protein 1246 30.22 0 1203572..1204117 + 181 71083954 - SAR11_1266 - membrane protein 1247 25.15 -1 1204114..1204284 - 56 71083955 - SAR11_1267 - hypothetical protein 1248 29.58 0 1204277..1204888 - 203 71083956 - SAR11_1268 - hypothetical protein 1249 28.49 0 1204894..1206546 - 550 71083957 - SAR11_1269 - hypothetical protein 1250 31.07 0 1206543..1207514 - 323 71083958 - SAR11_1270 - dipeptidase 1251 31.50 0 1207629..1208120 + 163 71083959 - SAR11_1271 - phosphoribosylaminoimidazole carboxylase catalytic chain 1252 26.65 0 1208130..1209176 + 348 71083960 purE SAR11_1272 - phosphoribosylaminoimidazole carboxylase ATPase chain (air carboxylase) 1253 32.48 0 1209188..1209655 + 155 71083961 - SAR11_1273 - acetyltransferase 1254 34.78 +1 1209774..1209980 + 68 71083962 cspL SAR11_1274 - cold shock DNA-binding domain-containing protein 1255 31.56 0 1210062..1210796 - 244 71083963 - SAR11_1275 - alpha/beta hydrolase fold 1256 32.62 0 1210949..1211227 + 92 71083964 - SAR11_1276 - hypothetical protein 1257 27.18 0 1211265..1212011 + 248 71083965 racX SAR11_1277 - aspartate racemase 1258 28.57 0 1212015..1212455 + 146 71083966 - SAR11_1278 - hypothetical protein 1259 28.53 0 1212445..1212756 - 103 71083967 - SAR11_1279 - unknown membrane protein 1260 30.05 0 1212866..1213717 + 283 71083968 - SAR11_1280 - hypothetical protein 1261 25.17 -1 1213722..1214309 - 195 71083969 soxG2 SAR11_1281 - sarcosine oxidase 1262 32.47 0 1214306..1217302 - 998 71083970 soxA2 SAR11_1282 - sarcosine oxidase alpha chain 1263 32.96 0 1217304..1217570 - 88 71083971 soxD2 SAR11_1283 - sarcosine oxidase delta chain 1264 36.20 +1 1217571..1218827 - 418 71083972 soxB2 SAR11_1284 - sarcosine oxidase beta subunit 1265 33.33 0 1218954..1220639 + 561 71083973 fhs SAR11_1285 - formate-tetrahydrofolate ligase 1266 29.92 0 1220643..1221434 - 263 71083974 - SAR11_1286 - glutamine amidotransferase 1267 33.08 0 1221431..1222597 - 388 71083975 - SAR11_1287 - iron-containing alcohol dehydrogenase 1268 30.43 0 1222669..1224045 + 458 71083976 ssdH SAR11_1288 - aldehyde dehydrogenase 1269 27.91 0 1224047..1224802 + 251 71083977 - SAR11_1289 - short chain dehydrogenase 1270 38.16 +2 1224850..1225926 - 358 71083978 - SAR11_1290 - TRAP-type extracellular solute-binding protein 1271 34.46 +1 1226064..1227395 - 443 71083979 dctM SAR11_1292 - TrapT family protein 1272 28.63 0 1227395..1227904 - 169 71083980 dctQ SAR11_1293 - tripartite ATP-independent periplasmic 1273 25.13 -1 1227911..1228105 - 64 71083981 - SAR11_1294 - hypothetical protein 1274 30.42 0 1228099..1229127 - 342 71083982 gpsA SAR11_1295 - glycerol-3-phosphate dehydrogenase (NAD) 1275 31.91 0 1229207..1230538 + 443 71083983 - SAR11_1296 - putative flavin-containing monooxygenase 1276 32.96 0 1230571..1232724 - 717 71083984 opuAB SAR11_1297 - glycine betaine/L-proline transport system permease 1277 32.07 0 1232734..1233759 - 341 71083985 opuAA SAR11_1298 - glycine betaine/l-proline transport ATP-binding protein 1278 26.96 0 1233832..1234380 - 182 71083986 - SAR11_1299 - unknown membrane protein 1279 36.51 +1 1234392..1234769 - 125 71083987 - SAR11_1300 - MORN repeat-containing protein 1280 22.29 -1 1234804..1235283 - 159 71083988 - SAR11_1301 - unknown membrane protein 1281 39.15 +2 1235374..1236318 - 314 71083989 opuAC SAR11_1302 - substrate-binding region of ABC-type glycine betaine transport system 1282 32.52 0 1236434..1238761 + 775 71083990 - SAR11_1303 - putative aminomethyltransferase protein 1283 30.48 0 1238765..1239115 + 116 71083991 rpl6e SAR11_1732 - ribosomal protein L6e 1284 35.21 +1 1239215..1240543 + 442 71083992 - SAR11_1304 - putative monomeric sarcosine oxidase 1285 35.58 +1 1240616..1242085 + 489 71083993 - SAR11_1305 - GlnT-like protein 1286 34.18 +1 1242110..1243054 + 314 71083994 - SAR11_1306 - glutamine amidotransferase-like protein 1287 34.27 +1 1243042..1243896 + 284 71083995 - SAR11_1307 - GXGXG motif-containing protein 1288 36.70 +1 1243896..1245320 + 474 71083996 - SAR11_1308 - glutamate synthase large subunit-like protein 1289 31.34 0 1245330..1245731 + 133 71083997 - SAR11_1309 - hypothetical protein 1290 39.40 +2 1245857..1247257 + 466 71083998 amt SAR11_1310 - ammonium transporter 1291 39.56 +2 1247269..1247493 + 74 71083999 - SAR11_1311 - unknown membrane protein 1292 29.41 0 1247554..1247706 + 50 71084000 - SAR11_1312 - unknown membrane protein 1293 31.63 0 1247719..1248597 + 292 71084001 glxB SAR11_1313 - glutamine amidotransferase-like protein glxB 1294 31.28 0 1248601..1249281 + 226 71084002 glxC SAR11_1314 - GlxC protein 1295 36.45 +1 1249284..1250600 + 438 71084003 glxD SAR11_1315 - glutamate synthase large subunit 1296 31.67 0 1250644..1251969 + 441 71084004 glnT SAR11_1316 - glutamine synthetase III 1297 30.53 0 1251973..1253115 + 380 71084005 ygeX SAR11_1317 - diaminopropionate ammonia-lyase 1298 29.47 0 1253122..1254543 + 473 71084006 phrB SAR11_1318 - deoxyribodipyrimidine photo-lyase 1299 31.19 0 1254540..1254959 - 139 71084007 - SAR11_1319 - hypothetical protein 1300 21.02 -2 1254956..1255816 - 286 71084008 - SAR11_1320 - AFG1-like ATPase 1301 32.19 0 1256001..1256438 - 145 71084009 - SAR11_1321 - hypothetical protein 1302 24.50 -1 1256441..1257742 - 433 71084010 - SAR11_1322 - PQQ repeat-containing protein 1303 22.48 -1 1257732..1258376 - 214 71084011 - SAR11_1323 - unknown membrane protein 1304 32.73 0 1258379..1261048 - 889 71084012 acnA SAR11_1324 - aconitate hydratase 1305 27.21 0 1261054..1261641 - 195 71084013 yfiK SAR11_1325 - transporter 1306 30.12 0 1261647..1261988 - 113 71084014 csaA SAR11_1326 - CsaA protein 1307 31.65 0 1262016..1263206 + 396 71084015 argE SAR11_1327 - acetylornithine deacetylase 1308 34.66 +1 1263228..1264664 - 478 71084016 - SAR11_1328 - aldehyde dehydrogenase 1309 35.92 +1 1264679..1265644 - 321 71084017 speB SAR11_1329 - agmatinase 1310 23.04 -1 1265702..1266439 + 245 71084018 - SAR11_1330 - putative lipoprotein 1311 26.67 0 1266439..1267083 + 214 71084019 ppiA SAR11_1331 - peptidylprolyl cis-trans isomerase precursor 1312 22.33 -1 1267165..1268373 + 402 71084020 - SAR11_1332 - hypothetical protein 1313 29.91 0 1268370..1270592 - 740 71084021 fadB SAR11_1333 - 3-hydroxyacyl-CoA dehydrogenase 1314 34.50 +1 1270649..1271503 - 284 71084022 potC SAR11_1334 - spermidine/putrescine transport system permease protein potc 1315 31.97 0 1271507..1272754 - 415 71084023 potB SAR11_1335 - spermidine/putrescine transport system permease protein potb 1316 38.95 +2 1272839..1273960 - 373 71084024 potD SAR11_1336 - spermidine/putrescine-binding periplasmic protein 1317 32.78 0 1274095..1275183 - 362 71084025 potA SAR11_1337 - spermidine/putrescine transport ATP-binding protein pota 1318 33.76 +1 1275242..1276408 - 388 71084026 y4tM SAR11_1338 - X-Pro dipeptidase 1319 29.18 0 1276409..1277155 - 248 71084027 - SAR11_1339 - racemase 1320 33.03 0 1277497..1278489 + 330 71084028 - SAR11_1340 - luciferase-like monooxygenase 1321 35.71 +1 1278489..1279076 + 195 71084029 - SAR11_1341 - hypothetical protein 1322 26.18 0 1279081..1279863 + 260 71084030 - SAR11_1342 - alpha/beta hydrolase fold 1323 34.08 +1 1279864..1281345 + 493 71084031 dhaS SAR11_1343 - betaine-aldehyde dehydrogenase 1324 28.09 0 1281350..1282207 + 285 71084032 - SAR11_1344 - hypothetical protein 29.30 MEAN 4.13 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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