version 1.0
Candidatus Pelagibacter ubique HTCC1062, complete genome - 1..1308759 1354 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1113 30.53 0 1089302..1090051 - 249 71083821 - SAR11_1134 - hypothetical protein 1114 27.47 0 1090073..1090771 + 232 71083822 sfsA SAR11_1135 - sugar fermentation stimulation protein 1115 33.07 0 1090764..1091534 + 256 71083823 map SAR11_1136 - methionine aminopeptidase 1116 30.24 0 1091538..1092830 + 430 71083824 purB SAR11_1137 - adenylosuccinate lyase 1117 27.59 0 1092830..1093612 + 260 71083825 purC SAR11_1138 - phosphoribosylaminoimidazole-succinocarboxamide synthase 1118 28.40 0 1093614..1093856 + 80 71083826 - SAR11_1139 - phosphoribosylformylglycinamidine (FGAM) synthase 1119 29.97 0 1093863..1094546 + 227 71083827 purQ SAR11_1140 - phosphoribosylformylglycinamidine synthase I 1120 31.69 0 1094546..1096738 + 730 71083828 purL SAR11_1141 - phosphoribosylformylglycinamidine synthase II (FGAM synthase II) 1121 32.03 0 1096740..1096970 + 76 71083829 - SAR11_1142 - BolA-like protein 1122 30.63 0 1096970..1097302 + 110 71083830 grlA SAR11_1143 - glutaredoxin 1123 28.21 0 1097307..1098497 - 396 71083831 cfa SAR11_1144 - cyclopropane-fatty-acyl-phospholipid synthase 1124 30.58 0 1098633..1099250 - 205 71083832 rpsD SAR11_1145 - 30S ribosomal protein S4 1125 27.31 0 1099291..1100004 - 237 71083833 - SAR11_1146 - SpoU rRNA methylase family 1126 32.77 0 1100004..1101605 - 533 71083834 - SAR11_1147 - alpha-isopropylmalate/homocitrate synthase family transferase 1127 27.90 0 1101602..1102963 - 453 71083835 cysS SAR11_1148 - cysteinyl-tRNA synthetase 1128 33.19 0 1103009..1103695 - 228 71083836 nadE SAR11_1149 - NH(3)-dependent NAD+ synthetase NadE 1129 32.10 0 1103786..1105165 - 459 71083837 dhs SAR11_1150 - 2-dehydro-3-deoxy-phosphoheptonate aldolase 1130 31.08 0 1105201..1107021 - 606 71083838 glmS SAR11_1151 - glutamine-fructose-6-phosphate transaminase (isomerizing) 1131 27.40 0 1107023..1107646 - 207 71083839 glmU SAR11_1152 - UDP-N-acetylglucosamine diphosphorylase 1132 30.00 0 1107717..1108406 + 229 71083840 gph SAR11_1153 - phosphoglycolate phosphatase 1133 32.20 0 1108457..1109959 + 500 71083841 prpD SAR11_1154 - 2-methylcitrate dehydratase 2 1134 30.99 0 1109959..1110855 + 298 71083842 prpB SAR11_1155 - hypothetical protein 1135 31.02 0 1110855..1111979 + 374 71083843 prpC SAR11_1156 - methylcitrate synthase 1136 29.51 0 1111980..1112606 - 208 71083844 - SAR11_1157 - methyltransferase 1137 33.93 +1 1112611..1113624 - 337 71083845 nrdF SAR11_1158 - ribonucleotide-diphosphate reductase subunit beta 1138 33.64 +1 1113630..1115567 - 645 71083846 nrdA SAR11_1159 - ribonucleotide-diphosphate reductase subunit alpha 1139 30.52 0 1115724..1117178 + 484 71083847 manB SAR11_1160 - phosphomannomutase 1140 32.62 0 1117162..1117443 + 93 71083848 - SAR11_1728 - hypothetical protein 1141 31.04 0 1117612..1118571 - 319 71083849 sbcC SAR11_1161 - sbcC 1142 29.03 0 1118568..1119218 - 216 71083850 - SAR11_1162 - hypothetical protein 1143 29.89 0 1119467..1119844 - 125 71083851 - SAR11_1163 - hypothetical protein 1144 31.56 0 1119848..1120411 - 187 71083852 - SAR11_1164 - lipoprotein 1145 28.06 0 1120857..1121216 + 119 71083853 - SAR11_1165 - exonuclease 1146 22.92 -1 1121220..1121555 - 111 71083854 - SAR11_1166 - hypothetical protein 1147 30.86 0 1121545..1122273 - 242 71083855 - SAR11_1167 - hypothetical protein 1148 40.68 +2 1122281..1122634 - 117 71083856 - SAR11_1168 - hypothetical protein 1149 31.67 0 1122717..1123616 - 299 71083857 - SAR11_1169 - hypothetical protein 1150 24.19 -1 1123935..1124120 - 61 71083858 - SAR11_1170 - hypothetical protein 1151 30.36 0 1124146..1125489 - 447 71083859 ordL SAR11_1171 - oxidoreductase 1152 34.06 +1 1125607..1126158 - 183 71083860 osmC SAR11_1172 - OsmC-like protein 1153 34.84 +1 1126231..1127292 - 353 71083861 bhmT SAR11_1173 - betaine-homocysteine methyltransferase 1154 26.67 0 1127554..1127718 - 54 71083862 - SAR11_1730 - hypothetical protein 1155 34.78 +1 1127719..1127925 - 68 71083863 - SAR11_1729 - hypothetical protein 1156 30.40 0 1128011..1128691 - 226 71083864 phoB SAR11_1174 - phosphate regulatory protein 1157 31.90 0 1128691..1129389 - 232 71083865 phoU SAR11_1175 - phosphate transport regulon regulator PhoU 1158 31.51 0 1129392..1130159 - 255 71083866 pstB SAR11_1176 - phosphate ABC transporter 1159 31.67 0 1130159..1131418 - 419 71083867 pstA SAR11_1177 - ABC transporter 1160 30.76 0 1131411..1132811 - 466 71083868 pstC SAR11_1178 - ABC transporter 1161 35.40 +1 1132929..1133945 - 338 71083869 pstS SAR11_1179 - phosphate ABC transporter 1162 27.30 0 1134061..1135104 - 347 71083870 phoR SAR11_1180 - phosphate regulon 1163 34.78 +1 1135181..1136146 + 321 71083871 - SAR11_1181 - hypothetical protein 1164 37.58 +2 1136254..1136418 - 54 71083872 - SAR11_1731 - hypothetical protein 1165 26.78 0 1136415..1136597 - 60 71083873 - SAR11_1182 - hypothetical protein 1166 32.80 0 1136605..1136979 - 124 71083874 - SAR11_1183 - hypothetical protein 1167 30.77 0 1137048..1137476 - 142 71083875 cytC SAR11_1184 - cytochrome c 1168 29.49 0 1137555..1138439 + 294 71083876 - SAR11_1185 - hypothetical protein 1169 30.73 0 1138454..1138990 - 178 71083877 - SAR11_1186 - hypothetical protein 1170 29.69 0 1139061..1140461 - 466 71083878 gdhA SAR11_1187 - glutamate dehydrogenase [NAD(P)] precursor 1171 33.95 +1 1140479..1140967 - 162 71083879 - SAR11_1188 - hypothetical protein 1172 33.33 0 1140964..1141257 - 97 71083880 - SAR11_1189 - hypothetical protein 1173 33.89 +1 1141259..1142869 - 536 71083881 - SAR11_1190 - sulfate permease family protein 1174 24.69 -1 1143032..1143436 - 134 71083882 - SAR11_1191 - HIT domain-containing protein 1175 28.24 0 1143439..1144203 - 254 71083883 - SAR11_1192 - hypothetical protein 1176 32.73 0 1144265..1145257 - 330 71083884 - SAR11_1193 - tRNA-dihydrouridine synthase A 1177 34.25 +1 1145280..1145822 - 180 71083885 rpoZ SAR11_1194 - DNA-directed RNA polymerase omega chain (RNAP omega subunit) 1178 29.20 0 1145866..1147074 - 402 71083886 - SAR11_1195 - membrane permease of unknown function 1179 34.72 +1 1147089..1147955 + 288 71083887 mmsB SAR11_1196 - 3-hydroxyisobutyrate dehydrogenase 1180 32.00 0 1147962..1148561 + 199 71083888 - SAR11_1197 - flavin mononucleotide binding protein 1181 33.33 0 1148558..1149070 - 170 71083889 - SAR11_1198 - transferase family protein 1182 30.45 0 1149091..1149645 + 184 71083890 - SAR11_1199 - hypothetical protein 1183 29.14 0 1149702..1150727 + 341 71083891 amsK SAR11_1200 - glycosyl transferase 1184 33.07 0 1150724..1152226 - 500 71083892 tctA SAR11_1201 - putative tricarboxylic transport TctA 1185 28.66 0 1152223..1152693 - 156 71083893 tctB SAR11_1202 - putative tricarboxylic transport tctB 1186 35.47 +1 1152723..1153703 - 326 71083894 tctC SAR11_1203 - putative tricarboxylic transport TctC 1187 28.78 0 1153904..1155001 + 365 71083895 abrB SAR11_1204 - AbrB family transcriptional regulator 1188 27.55 0 1154993..1155925 - 310 71083896 rfaF SAR11_1206 - heptosyltransferase family protein 1189 23.59 -1 1155958..1156347 + 129 71083897 - SAR11_1207 - hypothetical protein 1190 28.44 0 1156341..1157015 - 224 71083898 oocM SAR11_1208 - octopine-like transport system permease protein oocM 1191 31.60 0 1157015..1157707 - 230 71083899 occQ SAR11_1209 - ABC transporter 1192 36.62 +1 1157753..1158604 - 283 71083900 occT SAR11_1210 - ABC transporter 1193 32.66 0 1158666..1159706 - 346 71083901 speE SAR11_1211 - spermine/spermidine synthase 1194 28.57 0 1159819..1160343 - 174 71083902 pfs SAR11_1212 - 5'-methylthioadenosine nucleosidase/S-adenosylhomocysteinenucleosidase 1195 28.41 0 1160381..1160908 + 175 71083903 apt SAR11_1213 - adenine phosphoribosyltransferase 1196 22.17 -1 1160941..1162149 + 402 71083904 - SAR11_1214 - TPR repeat-containing protein 1197 23.25 -1 1162229..1163071 - 280 71083905 - SAR11_1215 - sulfotransferase domain-containing protein 1198 35.09 +1 1163669..1164238 + 189 71083906 ecpD SAR11_1216 - fimbrial protein pilin precursor 1199 29.35 0 1164385..1164786 + 133 71083907 glbN SAR11_1217 - globin family protein 1200 27.49 0 1164991..1165692 + 233 71083908 sigB SAR11_1218 - sigma factor SigB regulation protein 1201 34.65 +1 1165696..1166454 + 252 71083909 - SAR11_1219 - fimbrial protein pilin 1202 23.68 -1 1166737..1166964 - 75 71083910 - SAR11_1220 - hypothetical protein 1203 32.23 0 1167006..1169450 - 814 71083911 - SAR11_1221 - sarcosine dehydrogenase 1204 28.60 0 1169497..1169940 - 147 71083912 cycA SAR11_1222 - cytochrome c' 1205 23.94 -1 1169944..1170486 + 180 71083913 - SAR11_1223 - cytochrome b561 family protein 1206 31.91 0 1170490..1171194 - 234 71083914 - SAR11_1225 - hypothetical protein 1207 20.70 -2 1171170..1171739 - 189 71083915 - SAR11_1226 - methyltransferase 1208 29.25 0 1171935..1172888 + 317 71083916 - SAR11_1227 - ADP-ribosylglycohydrolase 1209 26.21 0 1172889..1174208 + 439 71083917 dinF SAR11_1228 - DNA-damage inducible protein F 1210 30.97 0 1174245..1175258 + 337 71083918 - SAR11_1229 - hydroxyacylglutathione hydrolase 1211 20.66 -2 1175268..1175693 - 141 71083919 - SAR11_1230 - hypothetical protein 1212 28.18 0 1175833..1176201 - 122 71083920 - SAR11_1231 - thioredoxin 29.30 MEAN 4.13 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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