version 1.0
Candidatus Pelagibacter ubique HTCC1062, complete genome - 1..1308759 1354 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1060 30.68 0 1046091..1047032 + 313 71083768 pyrB SAR11_1080 - aspartate carbamoyltransferase 1061 30.77 0 1047033..1048319 + 428 71083769 pyrC SAR11_1081 - dihydroorotase 1062 28.30 0 1048322..1048897 + 191 71083770 ygiH SAR11_1082 - hypothetical protein 1063 31.06 0 1048935..1051526 + 863 71083771 topA SAR11_1083 - DNA topoisomerase I 1064 24.09 -1 1051523..1051825 + 100 71083772 - SAR11_1084 - hypothetical protein 1065 32.03 0 1051828..1052289 + 153 71083773 - SAR11_1085 - endoribonuclease L-PSP 1066 26.25 0 1052286..1053584 - 432 71083774 ugd SAR11_1086 - udpglucose 6-dehydrogenase 1067 25.25 0 1053581..1054396 - 271 71083775 galU SAR11_1087 - UTP-glucose-1-phosphate uridylyltransferase pXO1-94 1068 22.18 -1 1054401..1055243 + 280 71083776 panC SAR11_1088 - pantoate-beta-alanine ligase 1069 29.99 0 1055240..1056613 - 457 71083777 mgtE SAR11_1089 - magnesium transport protein mgtE 1070 25.60 0 1056675..1057295 + 206 71083778 rfaL SAR11_1090 - lipoate-protein ligase B 1071 27.65 0 1057276..1058190 - 304 71083779 rluC SAR11_1091 - ribosomal large subunit pseudouridine synthase C 1072 30.14 0 1058215..1058652 - 145 71083780 rplQ SAR11_1092 - ribosomal protein L17 1073 31.10 0 1058652..1059680 - 342 71083781 rpoA SAR11_1093 - DNA-directed RNA polymerase subunit alpha 1074 31.79 0 1059684..1060136 - 150 71083782 rpsK SAR11_1094 - 30S ribosomal protein S11 1075 30.73 0 1060144..1060527 - 127 71083783 rpsM SAR11_1095 - 30S ribosomal protein S13 1076 27.88 0 1060583..1061224 - 213 71083784 adk SAR11_1096 - adenylate kinase 1077 31.62 0 1061229..1062509 - 426 71083785 secY SAR11_1097 - preprotein translocase SECY subunit 1078 29.00 0 1062520..1062981 - 153 71083786 rplO SAR11_1099 - 50S ribosomal protein L15 1079 34.31 +1 1062981..1063493 - 170 71083787 rpsE SAR11_1100 - 30S ribosomal protein S5 1080 27.45 0 1063496..1063852 - 118 71083788 rplR SAR11_1101 - ribosomal protein L18 1081 32.04 0 1063852..1064391 - 179 71083789 rplF SAR11_1102 - ribosomal protein L6 1082 30.81 0 1064391..1064786 - 131 71083790 rpsH SAR11_1103 - 30S ribosomal protein S8 1083 31.37 0 1064797..1065102 - 101 71083791 rpsN SAR11_1104 - 30S ribosomal protein S14 1084 28.83 0 1065105..1065659 - 184 71083792 rplE SAR11_1105 - 50S ribosomal protein L5 1085 28.51 0 1065659..1065907 - 82 71083793 rplX SAR11_1106 - 50S ribosomal protein L24 1086 33.33 0 1065908..1066276 - 122 71083794 rplN SAR11_1107 - 50S ribosomal protein L14 1087 27.00 0 1066273..1066509 - 78 71083795 rpsQ SAR11_1108 - ribosomal protein S17 1088 20.31 -2 1066502..1066693 - 63 71083796 rpmC SAR11_1109 - ribosomal L29 protein 1089 35.52 +1 1066695..1067105 - 136 71083797 rplP SAR11_1110 - 50S ribosomal protein L16 1090 30.25 0 1067108..1067788 - 226 71083798 rpsC SAR11_1111 - 30S ribosomal protein S3 1091 28.57 0 1067772..1068170 - 132 71083799 rplV SAR11_1112 - 50S ribosomal protein L22 1092 30.27 0 1068173..1068466 - 97 71083800 rpsS SAR11_1113 - 30S ribosomal protein S19 1093 35.58 +1 1068466..1069311 - 281 71083801 rplB SAR11_1114 - 50S ribosomal protein L2 1094 25.85 0 1069314..1069607 - 97 71083802 rplW SAR11_1115 - ribosomal protein L23 1095 25.32 0 1069609..1070232 - 207 71083803 rplD SAR11_1116 - ribosomal protein L4 1096 30.10 0 1070232..1070942 - 236 71083804 rplC SAR11_1117 - 50S ribosomal protein L3 1097 30.42 0 1070945..1071253 - 102 71083805 rpsJ SAR11_1118 - 30S ribosomal protein S10 1098 34.58 +1 1071259..1073337 - 692 71083806 fusA SAR11_1119 - translation elongation factor EF-G 1099 30.36 0 1073344..1073814 - 156 71083807 rpsG SAR11_1120 - 30S ribosomal protein S7 1100 34.68 +1 1073817..1074188 - 123 71083808 rpsL SAR11_1121 - 30S ribosomal protein S12 1101 32.66 0 1074360..1078529 - 1389 71083809 rpoC SAR11_1122 - DNA-directed RNA polymerase beta prime chain 1102 31.38 0 1078532..1082623 - 1363 71083810 rpoB SAR11_1123 - DNA-directed RNA polymerase 1103 37.98 +2 1082679..1083044 - 121 71083811 rplL SAR11_1124 - 50S ribosomal protein L31 1104 33.13 0 1083072..1083572 - 166 71083812 rplJ SAR11_1125 - 50S ribosomal protein L10P 1105 30.00 0 1083578..1084267 - 229 71083813 rplA SAR11_1126 - ribosomal protein L1 1106 35.21 +1 1084267..1084692 - 141 71083814 rplK SAR11_1127 - ribosomal protein L11 1107 32.02 0 1084692..1085222 - 176 71083815 nusG SAR11_1128 - transcription antitermination protein NusG 1108 31.25 0 1085222..1085413 - 63 71083816 secE SAR11_1129 - protein secE/sec61-gamma protein 1109 36.36 +1 1085516..1086706 - 396 71083817 tufB SAR11_1130 - elongation factor Tu 1110 29.30 0 1087091..1087834 + 247 71083818 - SAR11_1131 - SpoU rRNA methylase family 1111 25.38 0 1087948..1088727 - 259 71083819 ppnK SAR11_1132 - inorganic polyphosphate/ATP-NAD kinase 1112 23.88 -1 1088896..1089297 - 133 71083820 - SAR11_1133 - hypothetical protein 1113 30.53 0 1089302..1090051 - 249 71083821 - SAR11_1134 - hypothetical protein 1114 27.47 0 1090073..1090771 + 232 71083822 sfsA SAR11_1135 - sugar fermentation stimulation protein 1115 33.07 0 1090764..1091534 + 256 71083823 map SAR11_1136 - methionine aminopeptidase 1116 30.24 0 1091538..1092830 + 430 71083824 purB SAR11_1137 - adenylosuccinate lyase 1117 27.59 0 1092830..1093612 + 260 71083825 purC SAR11_1138 - phosphoribosylaminoimidazole-succinocarboxamide synthase 1118 28.40 0 1093614..1093856 + 80 71083826 - SAR11_1139 - phosphoribosylformylglycinamidine (FGAM) synthase 1119 29.97 0 1093863..1094546 + 227 71083827 purQ SAR11_1140 - phosphoribosylformylglycinamidine synthase I 1120 31.69 0 1094546..1096738 + 730 71083828 purL SAR11_1141 - phosphoribosylformylglycinamidine synthase II (FGAM synthase II) 1121 32.03 0 1096740..1096970 + 76 71083829 - SAR11_1142 - BolA-like protein 1122 30.63 0 1096970..1097302 + 110 71083830 grlA SAR11_1143 - glutaredoxin 1123 28.21 0 1097307..1098497 - 396 71083831 cfa SAR11_1144 - cyclopropane-fatty-acyl-phospholipid synthase 1124 30.58 0 1098633..1099250 - 205 71083832 rpsD SAR11_1145 - 30S ribosomal protein S4 1125 27.31 0 1099291..1100004 - 237 71083833 - SAR11_1146 - SpoU rRNA methylase family 1126 32.77 0 1100004..1101605 - 533 71083834 - SAR11_1147 - alpha-isopropylmalate/homocitrate synthase family transferase 1127 27.90 0 1101602..1102963 - 453 71083835 cysS SAR11_1148 - cysteinyl-tRNA synthetase 1128 33.19 0 1103009..1103695 - 228 71083836 nadE SAR11_1149 - NH(3)-dependent NAD+ synthetase NadE 1129 32.10 0 1103786..1105165 - 459 71083837 dhs SAR11_1150 - 2-dehydro-3-deoxy-phosphoheptonate aldolase 1130 31.08 0 1105201..1107021 - 606 71083838 glmS SAR11_1151 - glutamine-fructose-6-phosphate transaminase (isomerizing) 1131 27.40 0 1107023..1107646 - 207 71083839 glmU SAR11_1152 - UDP-N-acetylglucosamine diphosphorylase 1132 30.00 0 1107717..1108406 + 229 71083840 gph SAR11_1153 - phosphoglycolate phosphatase 1133 32.20 0 1108457..1109959 + 500 71083841 prpD SAR11_1154 - 2-methylcitrate dehydratase 2 1134 30.99 0 1109959..1110855 + 298 71083842 prpB SAR11_1155 - hypothetical protein 1135 31.02 0 1110855..1111979 + 374 71083843 prpC SAR11_1156 - methylcitrate synthase 1136 29.51 0 1111980..1112606 - 208 71083844 - SAR11_1157 - methyltransferase 1137 33.93 +1 1112611..1113624 - 337 71083845 nrdF SAR11_1158 - ribonucleotide-diphosphate reductase subunit beta 1138 33.64 +1 1113630..1115567 - 645 71083846 nrdA SAR11_1159 - ribonucleotide-diphosphate reductase subunit alpha 1139 30.52 0 1115724..1117178 + 484 71083847 manB SAR11_1160 - phosphomannomutase 1140 32.62 0 1117162..1117443 + 93 71083848 - SAR11_1728 - hypothetical protein 1141 31.04 0 1117612..1118571 - 319 71083849 sbcC SAR11_1161 - sbcC 1142 29.03 0 1118568..1119218 - 216 71083850 - SAR11_1162 - hypothetical protein 1143 29.89 0 1119467..1119844 - 125 71083851 - SAR11_1163 - hypothetical protein 1144 31.56 0 1119848..1120411 - 187 71083852 - SAR11_1164 - lipoprotein 1145 28.06 0 1120857..1121216 + 119 71083853 - SAR11_1165 - exonuclease 1146 22.92 -1 1121220..1121555 - 111 71083854 - SAR11_1166 - hypothetical protein 1147 30.86 0 1121545..1122273 - 242 71083855 - SAR11_1167 - hypothetical protein 1148 40.68 +2 1122281..1122634 - 117 71083856 - SAR11_1168 - hypothetical protein 1149 31.67 0 1122717..1123616 - 299 71083857 - SAR11_1169 - hypothetical protein 1150 24.19 -1 1123935..1124120 - 61 71083858 - SAR11_1170 - hypothetical protein 1151 30.36 0 1124146..1125489 - 447 71083859 ordL SAR11_1171 - oxidoreductase 1152 34.06 +1 1125607..1126158 - 183 71083860 osmC SAR11_1172 - OsmC-like protein 1153 34.84 +1 1126231..1127292 - 353 71083861 bhmT SAR11_1173 - betaine-homocysteine methyltransferase 1154 26.67 0 1127554..1127718 - 54 71083862 - SAR11_1730 - hypothetical protein 1155 34.78 +1 1127719..1127925 - 68 71083863 - SAR11_1729 - hypothetical protein 1156 30.40 0 1128011..1128691 - 226 71083864 phoB SAR11_1174 - phosphate regulatory protein 1157 31.90 0 1128691..1129389 - 232 71083865 phoU SAR11_1175 - phosphate transport regulon regulator PhoU 1158 31.51 0 1129392..1130159 - 255 71083866 pstB SAR11_1176 - phosphate ABC transporter 1159 31.67 0 1130159..1131418 - 419 71083867 pstA SAR11_1177 - ABC transporter 29.30 MEAN 4.13 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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