version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 926 51.18 0 1080041..1081060 + 339 158520943 - Dole_0926 - O-methyltransferase family protein 927 55.19 0 1081454..1081915 - 153 158520944 - Dole_0927 - hypothetical protein 928 59.09 0 1082281..1083666 - 461 158520945 - Dole_0928 - TetR family transcriptional regulator 929 58.92 0 1083873..1085498 + 541 158520946 - Dole_0929 - acyl-CoA dehydrogenase domain-containing protein 930 59.44 0 1085645..1086778 + 377 158520947 - Dole_0930 - 2-hydroxyglutaryl-CoA dehydratase D-component 931 59.44 0 1086765..1088024 + 419 158520948 - Dole_0931 - 2-hydroxyglutaryl-CoA dehydratase D-component 932 59.22 0 1088264..1089445 + 393 158520949 - Dole_0932 - lipid-transfer protein 933 64.13 +1 1089779..1090921 + 380 158520950 - Dole_0933 - 2-nitropropane dioxygenase NPD 934 58.92 0 1090956..1092155 + 399 158520951 - Dole_0934 - acyl-CoA dehydrogenase domain-containing protein 935 60.69 0 1092320..1093039 - 239 158520952 - Dole_0935 - putative lipoprotein 936 38.82 -2 1093415..1093669 + 84 158520953 - Dole_0936 - XRE family transcriptional regulator 937 43.14 -2 1093882..1094289 + 135 158520954 - Dole_0937 - restriction endonuclease BamHI 938 41.85 -2 1094286..1095671 - 461 158520955 - Dole_0938 - putative RNA methylase 939 43.71 -2 1095668..1096573 - 301 158520956 - Dole_0939 - DNA methylase N-4/N-6 domain-containing protein 940 62.41 +1 1096596..1097606 - 336 158520957 - Dole_0940 - oligopeptide/dipeptide ABC transporter, ATPase subunit 941 64.24 +1 1097682..1098671 - 329 158520958 - Dole_0941 - oligopeptide/dipeptide ABC transporter, ATPase subunit 942 58.47 0 1098694..1100559 - 621 158520959 - Dole_0942 - extracellular solute-binding protein 943 59.22 0 1100743..1101789 - 348 158520960 - Dole_0943 - binding-protein-dependent transport systems inner membrane component 944 57.82 0 1102025..1103041 - 338 158520961 - Dole_0944 - binding-protein-dependent transport systems inner membrane component 945 61.07 0 1103218..1103610 - 130 158520962 - Dole_0945 - ribosomal protein S9 946 55.71 0 1103629..1104066 - 145 158520963 - Dole_0946 - 50S ribosomal protein L13 947 49.83 -1 1104138..1104428 - 96 158520964 - Dole_0947 - hypothetical protein 948 58.80 0 1104550..1105617 - 355 158520965 - Dole_0948 - hypothetical protein 949 57.43 0 1105709..1106953 - 414 158520966 - Dole_0949 - PGAP1 family protein 950 45.98 -1 1107103..1107363 + 86 158520967 - Dole_0950 - hypothetical protein 951 53.26 0 1107407..1109122 + 571 158520968 - Dole_0951 - AraC family transcriptional regulator 952 46.91 -1 1109151..1109312 - 53 158520969 - Dole_0952 - hypothetical protein 953 58.84 0 1109447..1110673 - 408 158520970 - Dole_0953 - hypothetical protein 954 45.30 -1 1110827..1111879 - 350 158520971 - Dole_0954 - TPR repeat-containing protein 955 58.37 0 1112252..1115374 + 1040 158520972 - Dole_0955 - hypothetical protein 956 55.80 0 1115502..1117286 + 594 158520973 - Dole_0956 - hypothetical protein 957 63.30 +1 1117401..1119272 - 623 158520974 - Dole_0957 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 958 56.89 0 1119440..1120360 + 306 158520975 - Dole_0958 - hypothetical protein 959 59.31 0 1120366..1121778 - 470 158520976 - Dole_0959 - aspartate kinase 960 60.51 0 1121788..1122177 - 129 158520977 - Dole_0960 - L-ectoine synthase 961 57.10 0 1122177..1123451 - 424 158520978 - Dole_0961 - diaminobutyrate--2-oxoglutarate aminotransferase 962 59.37 0 1123656..1124162 - 168 158520979 - Dole_0962 - L-2,4-diaminobutyric acid acetyltransferase 963 56.48 0 1124163..1125095 - 310 158520980 - Dole_0963 - porphobilinogen deaminase 964 62.07 0 1125894..1126829 + 311 158520981 - Dole_0964 - putative radical SAM protein 965 53.99 0 1126875..1127087 - 70 158520982 - Dole_0965 - hypothetical protein 966 57.58 0 1127492..1129021 + 509 158520983 - Dole_0966 - bifunctional GMP synthase/glutamine amidotransferase protein 967 58.21 0 1129028..1129819 + 263 158520984 - Dole_0967 - hypothetical protein 968 58.63 0 1129879..1130625 - 248 158520985 - Dole_0968 - 3-deoxy-D-manno-octulosonate cytidylyltransferase 969 63.33 +1 1130749..1131498 + 249 158520986 - Dole_0969 - hypothetical protein 970 59.02 0 1131506..1133035 + 509 158520987 - Dole_0970 - hypothetical protein 971 64.64 +1 1133011..1133652 + 213 158520988 - Dole_0971 - abortive infection protein 972 60.32 0 1133683..1134438 - 251 158520989 - Dole_0972 - hypothetical protein 973 62.18 0 1134534..1135958 - 474 158520990 - Dole_0973 - polynucleotide adenylyltransferase/metal dependent phosphohydrolase 974 60.12 0 1135970..1136932 - 320 158520991 - Dole_0974 - cation diffusion facilitator family transporter 975 62.18 0 1136964..1138100 - 378 158520992 - Dole_0975 - metallophosphoesterase 976 61.25 0 1138244..1138612 + 122 158520993 - Dole_0976 - membrane protein 977 50.67 0 1138800..1138949 + 49 158520994 - Dole_0977 - hypothetical protein 978 60.20 0 1138963..1140834 + 623 158520995 - Dole_0978 - carbamoyltransferase 979 60.10 0 1140815..1141438 + 207 158520996 - Dole_0979 - nuclear protein SET 980 60.93 0 1141452..1145375 + 1307 158520997 - Dole_0980 - ATP-dependent helicase HrpA 981 57.83 0 1145416..1150791 - 1791 158520998 - Dole_0981 - PAS/PAC sensor hybrid histidine kinase 982 61.39 0 1151013..1152470 + 485 158520999 - Dole_0982 - aldehyde dehydrogenase 983 56.24 0 1152638..1153366 - 242 158521000 - Dole_0983 - 1-acyl-sn-glycerol-3-phosphate acyltransferase 984 59.73 0 1153430..1154524 - 364 158521001 - Dole_0984 - glycosyl transferase group 1 985 59.08 0 1154594..1155463 - 289 158521002 - Dole_0985 - glycosyl transferase family protein 986 56.68 0 1155695..1157497 - 600 158521003 - Dole_0986 - radical SAM domain-containing protein 987 54.23 0 1157751..1158602 - 283 158521004 - Dole_0987 - MCP methyltransferase, CheR-type 988 59.65 0 1158610..1159764 - 384 158521005 - Dole_0988 - response regulator receiver modulated CheB methylesterase 989 57.78 0 1159812..1160261 - 149 158521006 - Dole_0989 - CheW protein 990 59.88 0 1160308..1163565 - 1085 158521007 - Dole_0990 - CheA signal transduction histidine kinase 991 60.44 0 1163735..1165018 - 427 158521008 - Dole_0991 - peptidase U32 992 55.14 0 1165197..1165682 + 161 158521009 - Dole_0992 - hypothetical protein 993 62.10 0 1165741..1166178 + 145 158521010 - Dole_0993 - hypothetical protein 994 60.54 0 1166178..1167695 + 505 158521011 - Dole_0994 - glucose-methanol-choline oxidoreductase 995 57.00 0 1167755..1168768 + 337 158521012 - Dole_0995 - hypothetical protein 996 37.35 -2 1168841..1169089 - 82 158521013 - Dole_0996 - hypothetical protein 997 54.25 0 1169143..1169577 + 144 158521014 - Dole_0997 - adenylylsulfate reductase, beta subunit 998 57.78 0 1169657..1171636 + 659 158521015 - Dole_0998 - adenylylsulfate reductase 999 55.97 0 1171930..1173201 + 423 158521016 - Dole_0999 - heterodisulfide reductase, subunit A (HdrA) 1000 58.88 0 1173212..1175548 + 778 158521017 - Dole_1000 - methyl-viologen-reducing hydrogenase delta subunit 1001 55.81 0 1175585..1176781 + 398 158521018 - Dole_1001 - heterodisulfide reductase, putative 1002 58.75 0 1177046..1178320 - 424 158521019 - Dole_1002 - sulfate adenylyltransferase 1003 62.25 0 1178563..1181028 + 821 158521020 - Dole_1003 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 1004 57.65 0 1181337..1183532 + 731 158521021 - Dole_1004 - hypothetical protein 1005 56.93 0 1183538..1183876 - 112 158521022 - Dole_1005 - hypothetical protein 1006 57.01 0 1183981..1185243 + 420 158521023 - Dole_1006 - Fe-S oxidoreductase-like protein 1007 61.77 0 1185459..1186193 + 244 158521024 - Dole_1007 - hypothetical protein 1008 53.91 0 1186496..1186840 + 114 158521025 - Dole_1008 - helix-hairpin-helix repeat-containing competence protein ComEA 1009 55.35 0 1186967..1188874 + 635 158521026 - Dole_1009 - polysaccharide biosynthesis protein CapD 1010 57.33 0 1188981..1190030 + 349 158521027 - Dole_1010 - dTDP-glucose 4,6-dehydratase 1011 55.86 0 1190054..1190932 + 292 158521028 - Dole_1011 - glucose-1-phosphate thymidylyltransferase 1012 54.08 0 1190935..1191498 + 187 158521029 - Dole_1012 - dTDP-4-dehydrorhamnose 3,5-epimerase 1013 60.25 0 1191768..1193480 + 570 158521030 - Dole_1013 - sulfate adenylyltransferase 1014 60.19 0 1193509..1194156 - 215 158521031 - Dole_1014 - ABC-type transport system auxiliary component-like protein 1015 58.49 0 1194190..1195155 - 321 158521032 - Dole_1015 - hypothetical protein 1016 55.64 0 1195203..1195964 - 253 158521033 - Dole_1016 - ABC transporter-related protein 1017 58.89 0 1195966..1197123 - 385 158521034 - Dole_1017 - hypothetical protein 1018 55.82 0 1197437..1198681 - 414 158521035 - Dole_1018 - hypothetical protein 1019 58.77 0 1198724..1199926 - 400 158521036 - Dole_1019 - sn-glycerol-3-phosphate dehydrogenase subunit C 1020 60.48 0 1199923..1201263 - 446 158521037 - Dole_1020 - anaerobic glycerol-3-phosphate dehydrogenase subunit B 1021 62.63 +1 1201250..1202908 - 552 158521038 - Dole_1021 - sn-glycerol-3-phosphate dehydrogenase subunit A 1022 51.85 0 1203117..1204952 + 611 158521039 - Dole_1022 - hypothetical protein 1023 49.16 -1 1205070..1206674 - 534 158521040 - Dole_1023 - hypothetical protein 1024 58.23 0 1206807..1207730 - 307 158521041 - Dole_1024 - beta-lactamase domain-containing protein 1025 58.56 0 1207787..1209316 - 509 158521042 - Dole_1025 - hypothetical protein 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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