version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 843 29.56 -2 983824..984141 + 105 158520860 - Dole_0843 - hypothetical protein 844 49.76 -1 984246..985268 + 340 158520861 - Dole_0844 - hypothetical protein 845 62.69 +1 985606..986736 + 376 158520862 - Dole_0845 - molybdopterin oxidoreductase Fe4S4 region 846 61.17 0 986785..988368 + 527 158520863 - Dole_0846 - molybdopterin oxidoreductase 847 61.75 0 988602..990656 - 684 158520864 - Dole_0847 - alpha amylase all-beta 848 57.79 0 990681..992201 - 506 158520865 - Dole_0848 - starch synthase catalytic subunit 849 60.75 0 992453..995005 - 850 158520866 - Dole_0849 - alpha-glucan phosphorylase 850 46.60 -1 995030..995338 - 102 158520867 - Dole_0850 - glycoside hydrolase family protein 851 64.55 +1 995850..1000151 - 1433 158520868 - Dole_0851 - Amylo-alpha-16-glucosidase 852 48.09 -1 1000806..1001876 - 356 158520869 - Dole_0852 - type IV pilus assembly PilZ 853 58.02 0 1002106..1002591 - 161 158520870 - Dole_0853 - hypothetical protein 854 60.42 0 1002588..1003547 - 319 158520871 - Dole_0854 - alpha/beta hydrolase domain-containing protein 855 61.28 0 1003544..1005568 - 674 158520872 - Dole_0855 - sodium/hydrogen exchanger 856 60.57 0 1005609..1006478 - 289 158520873 - Dole_0856 - zinc transporter ZupT 857 57.96 0 1006928..1007260 - 110 158520874 - Dole_0857 - hypothetical protein 858 55.74 0 1007416..1007772 - 118 158520875 - Dole_0858 - hypothetical protein 859 58.31 0 1007945..1009129 - 394 158520876 - Dole_0859 - CBS domain-containing protein 860 61.84 0 1009312..1010409 + 365 158520877 - Dole_0860 - 6-phosphofructokinase 861 61.80 0 1010419..1012104 + 561 158520878 - Dole_0861 - cobalamin B12-binding domain-containing protein 862 57.17 0 1012068..1012520 - 150 158520879 - Dole_0862 - hypothetical protein 863 57.87 0 1012517..1012948 - 143 158520880 - Dole_0863 - hypothetical protein 864 52.15 0 1013300..1014043 + 247 158520881 - Dole_0864 - hypothetical protein 865 53.55 0 1014063..1014344 + 93 158520882 - Dole_0865 - hypothetical protein 866 50.11 -1 1014399..1014845 + 148 158520883 - Dole_0866 - pseudouridylate synthase-like protein 867 59.57 0 1014980..1017697 + 905 158520884 - Dole_0867 - PAS/PAC sensor hybrid histidine kinase 868 57.91 0 1017713..1019140 + 475 158520885 - Dole_0868 - two component, sigma54 specific, Fis family transcriptional regulator 869 52.31 0 1019441..1019830 + 129 158520886 - Dole_0869 - hypothetical protein 870 58.93 0 1019847..1020182 + 111 158520887 - Dole_0870 - hypothetical protein 871 61.10 0 1020246..1022330 + 694 158520888 - Dole_0871 - CheA signal transduction histidine kinase 872 60.54 0 1022327..1024384 + 685 158520889 - Dole_0872 - methyl-accepting chemotaxis sensory transducer 873 57.21 0 1024430..1026205 + 591 158520890 - Dole_0873 - methyl-accepting chemotaxis sensory transducer 874 58.93 0 1026258..1026761 + 167 158520891 - Dole_0874 - CheW protein 875 58.46 0 1026923..1027738 + 271 158520892 - Dole_0875 - MCP methyltransferase, CheR-type 876 55.70 0 1027755..1028210 + 151 158520893 - Dole_0876 - response regulator receiver protein 877 60.61 0 1028207..1028767 + 186 158520894 - Dole_0877 - hypothetical protein 878 63.41 +1 1028760..1029896 + 378 158520895 - Dole_0878 - response regulator receiver modulated CheB methylesterase 879 60.09 0 1029874..1031775 + 633 158520896 - Dole_0879 - methyl-accepting chemotaxis sensory transducer 880 58.06 0 1031861..1032232 + 123 158520897 - Dole_0880 - response regulator receiver protein 881 58.61 0 1032236..1033849 + 537 158520898 - Dole_0881 - putative PAS/PAC sensor protein 882 56.58 0 1033904..1034458 + 184 158520899 - Dole_0882 - hypothetical protein 883 59.33 0 1034482..1034985 + 167 158520900 - Dole_0883 - type IV pilus assembly PilZ 884 60.09 0 1035339..1036616 - 425 158520901 - Dole_0884 - response regulator receiver protein 885 57.44 0 1036631..1037248 - 205 158520902 - Dole_0885 - response regulator receiver protein 886 59.13 0 1037266..1037889 - 207 158520903 - Dole_0886 - response regulator receiver protein 887 57.18 0 1037861..1038250 - 129 158520904 - Dole_0887 - response regulator receiver protein 888 60.60 0 1038247..1040190 - 647 158520905 - Dole_0888 - histidine kinase 889 50.67 0 1040444..1040893 - 149 158520906 - Dole_0889 - hypothetical protein 890 59.17 0 1040978..1042591 - 537 158520907 - Dole_0890 - radical SAM domain-containing protein 891 60.52 0 1043210..1044331 + 373 158520908 - Dole_0891 - 2-hydroxyglutaryl-CoA dehydratase D-component 892 57.61 0 1044328..1045773 + 481 158520909 - Dole_0892 - 2-hydroxyglutaryl-CoA dehydratase D-component 893 59.12 0 1045770..1046591 + 273 158520910 - Dole_0893 - putative CoA-substrate-specific enzyme activase 894 60.57 0 1046588..1047358 + 256 158520911 - Dole_0894 - putative CoA-substrate-specific enzyme activase 895 51.75 0 1047425..1047739 + 104 158520912 - Dole_0895 - XRE family transcriptional regulator 896 58.05 0 1047736..1048965 + 409 158520913 - Dole_0896 - HipA domain-containing protein 897 54.64 0 1049047..1049844 + 265 158520914 - Dole_0897 - enoyl-CoA hydratase/isomerase 898 47.77 -1 1049841..1050221 - 126 158520915 - Dole_0898 - hypothetical protein 899 49.19 -1 1050289..1051089 + 266 158520916 - Dole_0899 - hypothetical protein 900 37.55 -2 1051153..1051983 + 276 158520917 - Dole_0900 - hypothetical protein 901 35.66 -2 1052085..1054103 + 672 158520918 - Dole_0901 - ATP-dependent OLD family endonuclease 902 43.59 -2 1054221..1055351 + 376 158520919 - Dole_0902 - hypothetical protein 903 51.85 0 1055437..1056084 + 215 158520920 - Dole_0903 - type III restriction system methylase 904 53.92 0 1056071..1057615 + 514 158520921 - Dole_0904 - site-specific DNA-methyltransferase (adenine-specific) 905 56.25 0 1057608..1060169 + 853 158520922 - Dole_0905 - putative restriction enzyme 906 60.11 0 1060198..1062546 - 782 158520923 - Dole_0906 - formate C-acetyltransferase 907 60.94 0 1062590..1063078 - 162 158520924 - Dole_0907 - TPR repeat-containing protein 908 58.97 0 1063053..1065353 - 766 158520925 - Dole_0908 - 1A family penicillin-binding protein 909 58.33 0 1065504..1066415 + 303 158520926 - Dole_0909 - TPR repeat-containing protein 910 60.80 0 1066379..1067554 + 391 158520927 - Dole_0910 - hypothetical protein 911 56.16 0 1067569..1068120 + 183 158520928 - Dole_0911 - tellurite resistance protein TehB 912 61.63 0 1068136..1068552 + 138 158520929 - Dole_0912 - thioesterase superfamily protein 913 55.52 0 1068718..1069623 + 301 158520930 - Dole_0913 - response regulator receiver protein 914 60.86 0 1070458..1070853 + 131 158520931 - Dole_0914 - hypothetical protein 915 59.03 0 1071045..1071620 + 191 158520932 - Dole_0915 - membrane protein-like protein 916 59.67 0 1071623..1072780 + 385 158520933 - Dole_0916 - hypothetical protein 917 58.67 0 1072807..1073544 + 245 158520934 - Dole_0917 - ABC transporter-related protein 918 41.24 -2 1073924..1074214 + 96 158520935 - Dole_0918 - hypothetical protein 919 41.67 -2 1074430..1075341 + 303 158520936 - Dole_0919 - HNH endonuclease 920 39.24 -2 1075506..1076369 + 287 158520937 - Dole_0920 - hypothetical protein 921 53.90 0 1076842..1077687 + 281 158520938 - Dole_0921 - abortive infection protein 922 56.83 0 1077709..1078572 + 287 158520939 - Dole_0922 - hypothetical protein 923 47.92 -1 1078759..1079046 + 95 158520940 - Dole_0923 - prevent-host-death family protein 924 50.34 -1 1079043..1079483 + 146 158520941 - Dole_0924 - nucleic acid binding protein 925 51.36 0 1079568..1079972 + 134 158520942 - Dole_0925 - methyl-accepting chemotaxis sensory transducer 926 51.18 0 1080041..1081060 + 339 158520943 - Dole_0926 - O-methyltransferase family protein 927 55.19 0 1081454..1081915 - 153 158520944 - Dole_0927 - hypothetical protein 928 59.09 0 1082281..1083666 - 461 158520945 - Dole_0928 - TetR family transcriptional regulator 929 58.92 0 1083873..1085498 + 541 158520946 - Dole_0929 - acyl-CoA dehydrogenase domain-containing protein 930 59.44 0 1085645..1086778 + 377 158520947 - Dole_0930 - 2-hydroxyglutaryl-CoA dehydratase D-component 931 59.44 0 1086765..1088024 + 419 158520948 - Dole_0931 - 2-hydroxyglutaryl-CoA dehydratase D-component 932 59.22 0 1088264..1089445 + 393 158520949 - Dole_0932 - lipid-transfer protein 933 64.13 +1 1089779..1090921 + 380 158520950 - Dole_0933 - 2-nitropropane dioxygenase NPD 934 58.92 0 1090956..1092155 + 399 158520951 - Dole_0934 - acyl-CoA dehydrogenase domain-containing protein 935 60.69 0 1092320..1093039 - 239 158520952 - Dole_0935 - putative lipoprotein 936 38.82 -2 1093415..1093669 + 84 158520953 - Dole_0936 - XRE family transcriptional regulator 937 43.14 -2 1093882..1094289 + 135 158520954 - Dole_0937 - restriction endonuclease BamHI 938 41.85 -2 1094286..1095671 - 461 158520955 - Dole_0938 - putative RNA methylase 939 43.71 -2 1095668..1096573 - 301 158520956 - Dole_0939 - DNA methylase N-4/N-6 domain-containing protein 940 62.41 +1 1096596..1097606 - 336 158520957 - Dole_0940 - oligopeptide/dipeptide ABC transporter, ATPase subunit 941 64.24 +1 1097682..1098671 - 329 158520958 - Dole_0941 - oligopeptide/dipeptide ABC transporter, ATPase subunit 942 58.47 0 1098694..1100559 - 621 158520959 - Dole_0942 - extracellular solute-binding protein 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0