version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 724 55.73 0 848065..848439 + 124 158520741 - Dole_0724 - ribosomal protein L18 725 58.63 0 848516..849013 + 165 158520742 - Dole_0725 - ribosomal protein S5 726 56.90 0 849052..849225 + 57 158520743 - Dole_0726 - ribosomal protein L30 727 62.16 0 849212..849655 + 147 158520744 - Dole_0727 - ribosomal protein L15 728 56.36 0 849655..850944 + 429 158520745 - Dole_0728 - preprotein translocase, SecY subunit 729 49.77 -1 850986..851204 + 72 158520746 - Dole_0729 - translation initiation factor IF-1 730 54.17 0 851398..851781 + 127 158520747 - Dole_0730 - ribosomal protein S13 731 61.50 0 851807..852193 + 128 158520748 - Dole_0731 - ribosomal protein S11 732 54.23 0 852255..852881 + 208 158520749 - Dole_0732 - RNA-binding S4 domain-containing protein 733 56.57 0 852995..854014 + 339 158520750 - Dole_0733 - DNA-directed RNA polymerase, alpha subunit 734 62.52 +1 854023..854649 + 208 158520751 - Dole_0734 - ribosomal protein L17 735 59.39 0 854693..855736 - 347 158520752 - Dole_0735 - diguanylate cyclase with GAF sensor 736 54.01 0 855920..857104 - 394 158520753 - Dole_0736 - hypothetical protein 737 56.33 0 857189..858049 - 286 158520754 - Dole_0737 - hypothetical protein 738 60.60 0 858102..859997 - 631 158520755 - Dole_0738 - hypothetical protein 739 55.71 0 861664..862950 - 428 158520756 - Dole_0739 - CRISPR-associated TIGR02710 family 740 53.66 0 862978..864153 - 391 158520757 - Dole_0740 - CRISPR-associated RAMP Csm5 family protein 741 57.77 0 864150..865082 - 310 158520758 - Dole_0741 - hypothetical protein 742 55.69 0 865085..865813 - 242 158520759 - Dole_0742 - CRISPR-associated RAMP Csm3 family protein 743 50.30 -1 865834..866328 - 164 158520760 - Dole_0743 - CRISPR-associated Csm2 family protein 744 54.85 0 866347..868884 - 845 158520761 - Dole_0744 - CRISPR-associated Csm1 family protein 745 56.01 0 868896..870002 - 368 158520762 - Dole_0745 - CRISPR-associated protein APE2256 family 746 53.85 0 870439..871632 - 397 158520763 - Dole_0746 - CRISPR-associated NE0113 family protein 747 56.64 0 871644..872561 - 305 158520764 - Dole_0747 - hypothetical protein 748 60.23 0 872721..873512 - 263 158520765 - Dole_0748 - proto-chlorophyllide reductase 57 kD subunit 749 57.70 0 873684..874508 - 274 158520766 - Dole_0749 - hydroxyethylthiazole kinase 750 59.54 0 874533..874967 - 144 158520767 - Dole_0750 - MOSC domain-containing protein 751 58.18 0 875173..875808 - 211 158520768 - Dole_0751 - methionine biosynthesis protein MetW 752 60.20 0 875780..876955 - 391 158520769 - Dole_0752 - homoserine O-acetyltransferase 753 61.59 0 876952..878211 - 419 158520770 - Dole_0753 - O-acetylhomoserine aminocarboxypropyltransferase 754 58.23 0 878213..878674 - 153 158520771 - Dole_0754 - hypothetical protein 755 56.70 0 878748..879269 + 173 158520772 - Dole_0755 - NifU domain-containing protein 756 57.82 0 879299..880462 + 387 158520773 - Dole_0756 - aminotransferase class V 757 57.99 0 880542..881048 - 168 158520774 - Dole_0757 - hypothetical protein 758 62.64 +1 881077..881598 - 173 158520775 - Dole_0758 - hypothetical protein 759 59.75 0 881633..882037 - 134 158520776 - Dole_0759 - thioesterase superfamily protein 760 53.18 0 882034..882567 - 177 158520777 - Dole_0760 - hemerythrin HHE cation binding domain-containing protein 761 56.48 0 882643..883290 - 215 158520778 - Dole_0761 - hypothetical protein 762 61.67 0 883359..884159 - 266 158520779 - Dole_0762 - arsenite S-adenosylmethyltransferase 763 59.97 0 884466..885734 - 422 158520780 - Dole_0763 - major facilitator transporter 764 53.72 0 885912..886838 - 308 158520781 - Dole_0764 - hypothetical protein 765 58.56 0 886995..887660 - 221 158520782 - Dole_0765 - hypothetical protein 766 56.83 0 887740..888369 - 209 158520783 - Dole_0766 - type IV pilus assembly PilZ 767 60.17 0 888473..890995 - 840 158520784 - Dole_0767 - DNA internalization-related competence protein ComEC/Rec2 768 61.40 0 891281..892438 - 385 158520785 - Dole_0768 - hypothetical protein 769 59.94 0 892440..893837 - 465 158520786 - Dole_0769 - FAD linked oxidase domain-containing protein 770 59.43 0 893842..894864 - 340 158520787 - Dole_0770 - hypothetical protein 771 57.05 0 894929..895666 - 245 158520788 - Dole_0771 - heat shock protein DnaJ domain-containing protein 772 58.73 0 895810..898518 - 902 158520789 - Dole_0772 - peptidase C14 caspase catalytic subunit p20 773 60.85 0 898641..899861 - 406 158520790 - Dole_0773 - aspartate kinase 774 60.40 0 899915..900409 - 164 158520791 - Dole_0774 - hypothetical protein 775 62.80 +1 900363..901964 - 533 158520792 - Dole_0775 - carbohydrate kinase, YjeF related protein 776 63.01 +1 902418..903128 - 236 158520793 - Dole_0776 - pyridoxal phosphate biosynthetic protein PdxJ 777 59.52 0 903309..903602 - 97 158520794 - Dole_0777 - hypothetical protein 778 59.05 0 903652..906027 - 791 158520795 - Dole_0778 - metal dependent phosphohydrolase 779 58.33 0 906222..907217 - 331 158520796 - Dole_0779 - PhoH family protein 780 59.00 0 907396..907917 + 173 158520797 - Dole_0780 - colicin V production protein 781 58.89 0 907905..908714 + 269 158520798 - Dole_0781 - MazG family protein 782 59.52 0 908863..909492 + 209 158520799 - Dole_0782 - imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 783 60.13 0 909486..910265 + 259 158520800 - Dole_0783 - imidazoleglycerol phosphate synthase, cyclase subunit 784 53.02 0 910473..911102 - 209 158520801 - Dole_0784 - hypothetical protein 785 58.90 0 911471..912847 + 458 158520802 - Dole_0785 - hypothetical protein 786 57.61 0 912869..914005 - 378 158520803 - Dole_0786 - hypothetical protein 787 57.18 0 914227..915375 - 382 158520804 - Dole_0787 - platelet-activating factor acetylhydrolase plasma/intracellular isoform II 788 56.23 0 915875..916669 - 264 158520805 - Dole_0788 - hypothetical protein 789 35.39 -2 916725..917600 - 291 158520806 - Dole_0789 - hypothetical protein 790 60.89 0 917745..919823 - 692 158520807 - Dole_0790 - two component regulator propeller domain-containing protein 791 60.52 0 920127..921119 - 330 158520808 - Dole_0791 - beta-lactamase domain-containing protein 792 58.79 0 921123..921503 - 126 158520809 - Dole_0792 - hypothetical protein 793 50.20 -1 921659..922666 + 335 158520810 - Dole_0793 - hypothetical protein 794 57.37 0 922791..924263 - 490 158520811 - Dole_0794 - sodium/sulphate symporter 795 53.30 0 924644..925204 - 186 158520812 - Dole_0795 - CBS domain-containing protein 796 58.71 0 925265..926998 - 577 158520813 - Dole_0796 - hypothetical protein 797 57.40 0 927011..927517 - 168 158520814 - Dole_0797 - hypothetical protein 798 56.49 0 927875..928159 + 94 158520815 - Dole_0798 - hypothetical protein 799 61.45 0 928194..928538 + 114 158520816 - Dole_0799 - hypothetical protein 800 65.22 +1 928606..929571 + 321 158520817 - Dole_0800 - ATP synthase F0, C subunit 801 51.56 0 929650..930324 + 224 158520818 - Dole_0801 - ATP synthase F0, A subunit 802 65.46 +1 930368..930616 + 82 158520819 - Dole_0802 - ATP synthase F0, C subunit 803 59.26 0 930766..931224 + 152 158520820 - Dole_0803 - H+transporting two-sector ATPase B/B' subunit 804 58.10 0 931221..931850 + 209 158520821 - Dole_0804 - H+transporting two-sector ATPase B/B' subunit 805 56.75 0 932367..932981 + 204 158520822 - Dole_0805 - TetR family transcriptional regulator 806 64.65 +1 932989..934377 + 462 158520823 - Dole_0806 - outer membrane efflux protein 807 62.27 0 934616..935548 + 310 158520824 - Dole_0807 - secretion protein HlyD family protein 808 63.50 +1 935545..936492 + 315 158520825 - Dole_0808 - ABC transporter-related protein 809 63.57 +1 936479..937252 + 257 158520826 - Dole_0809 - ABC transporter-related protein 810 62.58 +1 937249..938349 + 366 158520827 - Dole_0810 - ABC-2 type transporter 811 59.79 0 938544..939677 + 377 158520828 - Dole_0811 - ABC-2 type transporter 812 43.14 -2 939922..940482 + 186 158520829 - Dole_0812 - hypothetical protein 813 51.31 0 940543..940848 - 101 158520830 - Dole_0813 - hypothetical protein 814 51.83 0 940835..942034 - 399 158520831 - Dole_0814 - hypothetical protein 815 55.84 0 942027..942839 - 270 158520832 - Dole_0815 - ORF H1617 816 54.35 0 943234..943899 - 221 158520833 - Dole_0816 - TetR family transcriptional regulator 817 54.90 0 944217..944981 + 254 158520834 - Dole_0817 - acetoacetate decarboxylase 818 60.30 0 945002..946414 + 470 158520835 - Dole_0818 - acyl-CoA dehydrogenase domain-containing protein 819 60.84 0 946436..947671 + 411 158520836 - Dole_0819 - acyl-CoA dehydrogenase domain-containing protein 820 35.05 -2 948229..949275 - 348 158520837 - Dole_0820 - hypothetical protein 821 31.88 -2 949994..950749 - 251 158520838 - Dole_0821 - DNA adenine methylase 822 47.64 -1 951032..952765 - 577 158520839 - Dole_0822 - restriction modification system DNA specificity subunit 823 53.51 0 952762..954243 - 493 158520840 - Dole_0823 - N-6 DNA methylase 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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