version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 317 62.70 +1 362964..364373 + 469 158520334 - Dole_0317 - glutamate synthase (NADPH), homotetrameric 318 56.60 0 364570..364887 - 105 158520335 - Dole_0318 - NifU domain-containing protein 319 54.76 0 365131..365466 + 111 158520336 - Dole_0319 - hypothetical protein 320 61.88 0 365851..366351 - 166 158520337 - Dole_0320 - hypothetical protein 321 58.84 0 366345..366842 - 165 158520338 - Dole_0321 - signal peptidase I 322 57.55 0 367112..368317 + 401 158520339 - Dole_0322 - TPR repeat-containing protein 323 59.62 0 368475..369113 + 212 158520340 - Dole_0323 - TPR repeat-containing protein 324 64.27 +1 369395..369853 - 152 158520341 - Dole_0324 - phosphodiesterase 325 62.11 0 370335..371519 + 394 158520342 - Dole_0325 - diguanylate cyclase 326 53.76 0 371538..372149 - 203 158520343 - Dole_0326 - antibiotic biosynthesis monooxygenase 327 58.89 0 373133..374032 + 299 158520344 - Dole_0327 - exopolyphosphatase-related protein 328 58.64 0 374161..376653 - 830 158520345 - Dole_0328 - Ig domain-containing protein 329 59.01 0 376692..379655 - 987 158520346 - Dole_0329 - type IV pilus secretin PilQ 330 59.63 0 379659..380639 - 326 158520347 - Dole_0330 - hypothetical protein 331 50.47 -1 380636..381271 - 211 158520348 - Dole_0331 - pilus assembly protein PilO 332 51.93 0 381283..381825 - 180 158520349 - Dole_0332 - fimbrial assembly family protein 333 52.18 0 381822..382877 - 351 158520350 - Dole_0333 - type IV pilus assembly protein PilM 334 52.29 0 382887..383039 - 50 158520351 - Dole_0334 - XRE family transcriptional regulator 335 64.19 +1 383454..384140 + 228 158520352 - Dole_0335 - hypothetical protein 336 57.00 0 384318..385310 - 330 158520353 - Dole_0336 - beta-lactamase domain-containing protein 337 59.63 0 385983..387716 + 577 158520354 - Dole_0337 - AMP-dependent synthetase and ligase 338 52.80 0 388370..388780 - 136 158520355 - Dole_0338 - hypothetical protein 339 60.66 0 388984..390264 + 426 158520356 - Dole_0339 - phosphopyruvate hydratase 340 59.57 0 390277..391122 + 281 158520357 - Dole_0340 - hypothetical protein 341 60.29 0 391138..392799 + 553 158520358 - Dole_0341 - CTP synthetase 342 58.68 0 392810..393523 + 237 158520359 - Dole_0342 - ferric uptake regulator family protein 343 56.96 0 393693..393929 + 78 158520360 - Dole_0343 - FeoA family protein 344 58.90 0 393936..396110 + 724 158520361 - Dole_0344 - ferrous iron transport protein B 345 47.85 -1 396241..396867 + 208 158520362 - Dole_0345 - metallophosphoesterase 346 55.56 0 396889..397338 + 149 158520363 - Dole_0346 - hypothetical protein 347 61.61 0 397460..398983 - 507 158520364 - Dole_0347 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 348 62.51 +1 399063..399977 - 304 158520365 - Dole_0348 - hypothetical protein 349 58.40 0 400007..401977 - 656 158520366 - Dole_0349 - cyclopropane-fatty-acyl-phospholipid synthase 350 59.59 0 401974..403245 - 423 158520367 - Dole_0350 - amine oxidase 351 55.72 0 403266..403676 - 136 158520368 - Dole_0351 - hypothetical protein 352 58.91 0 403690..404475 - 261 158520369 - Dole_0352 - hypothetical protein 353 60.72 0 404494..405888 - 464 158520370 - Dole_0353 - major facilitator transporter 354 56.68 0 405885..406475 - 196 158520371 - Dole_0354 - hypothetical protein 355 51.28 0 406920..407231 + 103 158520372 - Dole_0355 - hypothetical protein 356 59.89 0 407493..408407 + 304 158520373 - Dole_0356 - ArsR family transcriptional regulator 357 58.23 0 408827..410095 + 422 158520374 - Dole_0357 - adenosylhomocysteinase 358 58.76 0 410474..411991 + 505 158520375 - Dole_0358 - apolipoprotein N-acyltransferase 359 58.17 0 411968..413062 - 364 158520376 - Dole_0359 - hypothetical protein 360 56.33 0 413137..414036 - 299 158520377 - Dole_0360 - alpha/beta fold family hydrolase 361 55.08 0 414248..416293 + 681 158520378 - Dole_0361 - Fis family transcriptional regulator 362 65.44 +1 416327..417550 + 407 158520379 - Dole_0362 - major facilitator transporter 363 53.76 0 417621..420425 - 934 158520380 - Dole_0363 - parallel beta-helix repeat-containing protein 364 57.04 0 420485..421813 - 442 158520381 - Dole_0364 - hypothetical protein 365 58.16 0 422177..423046 + 289 158520382 - Dole_0365 - radical SAM domain-containing protein 366 56.48 0 423151..423582 + 143 158520383 - Dole_0366 - S23 ribosomal protein 367 60.52 0 423656..425671 + 671 158520384 - Dole_0367 - transketolase 368 60.39 0 425698..426462 + 254 158520385 - Dole_0368 - methyltransferase type 11 369 59.22 0 426552..427478 - 308 158520386 - Dole_0369 - DNA binding domain-containing protein 370 57.23 0 427693..428667 + 324 158520387 - Dole_0370 - phosphoesterase domain-containing protein 371 59.38 0 428881..429621 - 246 158520388 - Dole_0371 - hypothetical protein 372 55.13 0 429608..430231 - 207 158520389 - Dole_0372 - ribosomal RNA methyltransferase RrmJ/FtsJ 373 64.46 +1 430413..431771 - 452 158520390 - Dole_0373 - DNA repair protein RadA 374 57.33 0 432109..432783 + 224 158520391 - Dole_0374 - RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 375 57.87 0 432755..433345 + 196 158520392 - Dole_0375 - nitroreductase 376 57.79 0 433422..435371 + 649 158520393 - Dole_0376 - phosphoenolpyruvate carboxykinase 377 57.86 0 435563..437083 + 506 158520394 - Dole_0377 - major facilitator transporter 378 58.84 0 437232..438944 + 570 158520395 - Dole_0378 - hypothetical protein 379 61.54 0 439399..440295 - 298 158520396 - Dole_0379 - quinolinate synthetase complex, A subunit 380 56.67 0 440292..440981 - 229 158520397 - Dole_0380 - outer membrane lipoprotein carrier protein LolA 381 61.39 0 441315..441731 + 138 158520398 - Dole_0381 - hypothetical protein 382 46.67 -1 441735..441929 + 64 158520399 - Dole_0382 - hypothetical protein 383 60.67 0 442006..443739 + 577 158520400 - Dole_0383 - hydroxymethylbutenyl pyrophosphate reductase 384 63.17 +1 444062..444691 - 209 158520401 - Dole_0384 - hypothetical protein 385 59.30 0 444930..445187 + 85 158520402 - Dole_0385 - Smr protein/MutS2 386 58.02 0 445209..445601 + 130 158520403 - Dole_0386 - thioesterase superfamily protein 387 56.28 0 445891..446073 - 60 158520404 - Dole_0387 - hypothetical protein 388 53.78 0 446410..447612 + 400 158520405 - Dole_0388 - nicotinate phosphoribosyltransferase 389 57.11 0 447704..448603 + 299 158520406 - Dole_0389 - membrane-bound lytic murein transglycosylase B-like protein 390 61.19 0 448625..448843 + 72 158520407 - Dole_0390 - hypothetical protein 391 60.44 0 448840..449562 + 240 158520408 - Dole_0391 - biotin--acetyl-CoA-carboxylase ligase 392 59.86 0 450466..452979 + 837 158520409 - Dole_0392 - exporter of the RND superfamily protein-like protein 393 52.60 0 453039..453884 + 281 158520410 - Dole_0393 - hypothetical protein 394 61.50 0 453936..455579 + 547 158520411 - Dole_0394 - GH3 auxin-responsive promoter 395 58.30 0 455692..457065 + 457 158520412 - Dole_0395 - hypothetical protein 396 55.00 0 457317..458156 + 279 158520413 - Dole_0396 - hypothetical protein 397 58.57 0 458313..458954 + 213 158520414 - Dole_0397 - hypothetical protein 398 61.73 0 459063..459893 - 276 158520415 - Dole_0398 - aldo/keto reductase family oxidoreductase 399 61.64 0 460029..461102 + 357 158520416 - Dole_0399 - FAD dependent oxidoreductase 400 60.73 0 461188..462096 + 302 158520417 - Dole_0400 - periplasmic solute binding protein 401 61.76 0 462093..462866 + 257 158520418 - Dole_0401 - ABC transporter-related protein 402 62.65 +1 462871..463692 + 273 158520419 - Dole_0402 - ABC-3 protein 403 50.15 -1 464078..464404 - 108 158520420 - Dole_0403 - hypothetical protein 404 62.73 +1 464425..465897 - 490 158520421 - Dole_0404 - methyltransferase GidB 405 63.58 +1 465921..466697 + 258 158520422 - Dole_0405 - pseudouridine synthase 406 61.09 0 466691..467569 + 292 158520423 - Dole_0406 - hypothetical protein 407 62.47 +1 467448..469235 - 595 158520424 - Dole_0407 - radical SAM domain-containing protein 408 58.61 0 469645..470103 + 152 158520425 - Dole_0408 - hypothetical protein 409 59.40 0 470225..471601 + 458 158520426 - Dole_0409 - hypothetical protein 410 52.08 0 471818..472009 + 63 158520427 - Dole_0410 - hypothetical protein 411 57.67 0 472016..472393 + 125 158520428 - Dole_0411 - PilT domain-containing protein 412 60.68 0 472786..474171 + 461 158520429 - Dole_0412 - magnesium transporter 413 64.44 +1 474524..475873 + 449 158520430 - Dole_0413 - MATE efflux family protein 414 61.59 0 476184..477779 + 531 158520431 - Dole_0414 - peptide chain release factor 3 415 63.17 +1 477923..479095 - 390 158520432 - Dole_0415 - filamentation induced by cAMP protein Fic 416 58.16 0 479304..480314 - 336 158520433 - Dole_0416 - filamentation induced by cAMP protein Fic 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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