version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3166 53.46 0 3799851..3800327 - 158 158523183 - Dole_3173 - molybdenum cofactor biosynthesis protein C 3167 61.43 0 3800373..3800735 - 120 158523184 - Dole_3174 - protein involved in biosynthesis of molybdopterin 3168 58.46 0 3800807..3801415 - 202 158523185 - Dole_3175 - molybdopterin-guanine dinucleotide biosynthesis protein A 3169 55.64 0 3801699..3802106 + 135 158523186 - Dole_3176 - type IV pilus assembly PilZ 3170 60.00 0 3802245..3802799 + 184 158523187 - Dole_3177 - orotate phosphoribosyltransferase 3171 60.45 0 3802913..3804649 + 578 158523188 - Dole_3178 - histone deacetylase superfamily protein 3172 60.45 0 3804788..3805366 + 192 158523189 - Dole_3179 - protein tyrosine/serine phosphatase 3173 62.34 0 3805424..3807940 + 838 158523190 - Dole_3180 - TrkA domain-containing protein 3174 58.41 0 3807992..3810001 - 669 158523191 - Dole_3181 - chloride channel core 3175 57.74 0 3810565..3811449 - 294 158523192 - Dole_3182 - dihydropteroate synthase DHPS 3176 59.06 0 3811515..3812855 - 446 158523193 - Dole_3183 - acetyl-CoA decarbonylase/synthase complex subunit gamma 3177 59.02 0 3812941..3815151 - 736 158523194 - Dole_3184 - bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta 3178 59.51 0 3815197..3817236 - 679 158523195 - Dole_3185 - carbon-monoxide dehydrogenase, catalytic subunit 3179 60.69 0 3817320..3818876 - 518 158523196 - Dole_3186 - acetyl-CoA decarbonylase/synthase complex subunit delta 3180 61.57 0 3819308..3820111 - 267 158523197 - Dole_3187 - fructose-bisphosphate aldolase 3181 58.38 0 3820509..3821498 - 329 158523198 - Dole_3188 - radical SAM domain-containing protein 3182 59.75 0 3821679..3822242 - 187 158523199 - Dole_3189 - methyltransferase type 11 3183 63.70 +1 3822406..3823011 - 201 158523200 - Dole_3190 - alpha/beta hydrolase family protein 3184 63.88 +1 3823134..3824282 - 382 158523201 - Dole_3191 - 3'-5' exonuclease 3185 59.73 0 3824315..3824833 - 172 158523202 - Dole_3192 - hypothetical protein 3186 59.04 0 3824851..3826239 - 462 158523203 - Dole_3193 - diguanylate cyclase 3187 59.93 0 3826390..3828303 + 637 158523204 - Dole_3194 - threonyl-tRNA synthetase 3188 61.90 0 3828345..3828890 + 181 158523205 - Dole_3195 - Uracil phosphoribosyltransferase 3189 61.90 0 3829061..3829564 + 167 158523206 - Dole_3196 - molybdenum cofactor synthesis domain-containing protein 3190 32.58 -2 3829885..3830283 + 132 158523207 - Dole_3197 - hypothetical protein 3191 59.70 0 3830450..3832027 + 525 158523208 - Dole_3198 - AMP-dependent synthetase and ligase 3192 45.52 -1 3832020..3832298 - 92 158523209 - Dole_3199 - hypothetical protein 3193 61.15 0 3832362..3832760 - 132 158523210 - Dole_3200 - hypothetical protein 3194 61.32 0 3832753..3836325 - 1190 158523211 - Dole_3201 - glutamine--fructose-6-phosphate transaminase (isomerizing) 3195 59.89 0 3836350..3837411 - 353 158523212 - Dole_3202 - iron-containing alcohol dehydrogenase 3196 61.11 0 3837422..3838609 - 395 158523213 - Dole_3203 - DegT/DnrJ/EryC1/StrS aminotransferase 3197 60.53 0 3838810..3840732 - 640 158523214 - Dole_3204 - methionyl-tRNA synthetase 3198 56.73 0 3840751..3841605 - 284 158523215 - Dole_3205 - PSP1 domain-containing protein 3199 61.76 0 3841602..3842600 - 332 158523216 - Dole_3206 - DNA polymerase III, delta prime subunit 3200 52.17 0 3842626..3842901 - 91 158523217 - Dole_3207 - histone family protein DNA-binding protein 3201 59.92 0 3843057..3845456 - 799 158523218 - Dole_3208 - organic solvent tolerance protein 3202 63.53 +1 3845848..3847218 + 456 158523219 - Dole_3209 - hypothetical protein 3203 54.30 0 3847859..3848731 + 290 158523220 - Dole_3210 - 4-hydroxybenzoate polyprenyltransferase, putative 3204 62.50 +1 3848728..3849327 + 199 158523221 - Dole_3211 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 3205 59.78 0 3849320..3851104 + 594 158523222 - Dole_3212 - UbiD family decarboxylase 3206 55.01 0 3851179..3851667 + 162 158523223 - Dole_3213 - type IV pilus assembly PilZ 3207 60.22 0 3851895..3852545 - 216 158523224 - Dole_3214 - sporulation domain-containing protein 3208 61.58 0 3852698..3854368 - 556 158523225 - Dole_3215 - arginyl-tRNA synthetase 3209 56.03 0 3854398..3854820 - 140 158523226 - Dole_3216 - hypothetical protein 3210 57.83 0 3854946..3856394 - 482 158523227 - Dole_3217 - TrkH family potassium uptake protein 3211 58.68 0 3856395..3857759 - 454 158523228 - Dole_3218 - potassium transporter peripheral membrane component 3212 60.97 0 3857930..3858736 - 268 158523229 - Dole_3219 - hexapaptide repeat-containing transferase 3213 61.81 0 3858729..3859778 - 349 158523230 - Dole_3220 - hypothetical protein 3214 56.81 0 3859848..3860933 - 361 158523231 - Dole_3221 - phosphoserine aminotransferase 3215 63.07 +1 3861059..3862363 + 434 158523232 - Dole_3222 - histidinol dehydrogenase 3216 56.69 0 3862378..3864162 - 594 158523233 - Dole_3223 - histidine kinase 3217 55.61 0 3864306..3864974 - 222 158523234 - Dole_3224 - hypothetical protein 3218 59.39 0 3864984..3866219 - 411 158523235 - Dole_3225 - phosphate transporter 3219 62.70 +1 3867249..3868988 + 579 158523236 - Dole_3226 - ABC transporter-related protein 3220 59.96 0 3868985..3871012 + 675 158523237 - Dole_3227 - ABC transporter-related protein 3221 62.04 0 3871361..3872182 - 273 158523238 - Dole_3228 - silent information regulator protein Sir2 3222 65.74 +1 3872216..3873397 - 393 158523239 - Dole_3229 - hypothetical protein 3223 62.50 +1 3873457..3874440 - 327 158523240 - Dole_3230 - polyprenyl synthetase 3224 64.17 +1 3874437..3875759 - 440 158523241 - Dole_3231 - MiaB-like tRNA modifying enzyme YliG 3225 60.61 0 3875761..3876585 - 274 158523242 - Dole_3232 - enoyl-CoA hydratase/isomerase 3226 60.97 0 3876779..3877813 - 344 158523243 - Dole_3233 - ApbE family lipoprotein 3227 64.23 +1 3878000..3878944 + 314 158523244 - Dole_3234 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 3228 61.24 0 3878941..3879732 + 263 158523245 - Dole_3235 - beta-lactamase domain-containing protein 3229 56.11 0 3879729..3880391 + 220 158523246 - Dole_3236 - siroheme synthase 3230 60.00 0 3880500..3881339 + 279 158523247 - Dole_3237 - cytochrome c assembly protein 3231 60.21 0 3881336..3882652 + 438 158523248 - Dole_3238 - glutamyl-tRNA reductase 3232 60.86 0 3883103..3884548 - 481 158523249 - Dole_3239 - sigma-54 dependent trancsriptional regulator 3233 56.51 0 3884882..3885403 + 173 158523250 - Dole_3240 - hypothetical protein 3234 57.05 0 3885660..3886595 + 311 158523251 - Dole_3241 - hypothetical protein 3235 63.43 +1 3886846..3888144 + 432 158523252 - Dole_3242 - hypothetical protein 3236 61.92 0 3888141..3889403 + 420 158523253 - Dole_3243 - Orn/DAP/Arg decarboxylase 2 3237 55.40 0 3889933..3890145 + 70 158523254 - Dole_3244 - hypothetical protein 3238 63.74 +1 3890168..3891259 + 363 158523255 - Dole_3245 - hypothetical protein 3239 59.91 0 3891273..3891494 + 73 158523256 - Dole_3246 - SirA family protein 3240 59.89 0 3891546..3892091 + 181 158523257 - Dole_3247 - hypothetical protein 3241 62.57 +1 3892085..3892939 + 284 158523258 - Dole_3248 - hypothetical protein 3242 59.10 0 3893485..3894435 + 316 158523259 - Dole_3249 - selenide, water dikinase 3243 51.37 0 3895478..3896830 + 450 158523260 - Dole_3250 - transposase IS4 family protein 3244 60.13 0 3897194..3898234 + 346 158523261 - Dole_3251 - hypothetical protein 3245 56.75 0 3898252..3898755 + 167 158523262 - Dole_3252 - hypothetical protein 3246 60.83 0 3898834..3899964 + 376 158523263 - Dole_3253 - hypothetical protein 3247 61.51 0 3899980..3906336 + 2118 158523264 - Dole_3254 - hypothetical protein 3248 59.33 0 3906336..3908174 + 612 158523265 - Dole_3255 - hypothetical protein 3249 56.95 0 3908207..3910615 - 802 158523266 - Dole_3256 - PAS/PAC sensor hybrid histidine kinase 3250 55.25 0 3910679..3911755 - 358 158523267 - Dole_3257 - response regulator receiver modulated metal dependent phosphohydrolase 3251 56.47 0 3911783..3912625 - 280 158523268 - Dole_3258 - PAS/PAC sensor signal transduction histidine kinase 3252 54.46 0 3912843..3914939 - 698 158523269 - Dole_3259 - hypothetical protein 3253 52.64 0 3915364..3915855 - 163 158523270 - Dole_3260 - hypothetical protein 3254 60.68 0 3915939..3917225 - 428 158523271 - Dole_3261 - hypothetical protein 3255 61.76 0 3917723..3919150 - 475 158523272 - Dole_3262 - two component, sigma54 specific, Fis family transcriptional regulator 3256 58.59 0 3919134..3921053 - 639 158523273 - Dole_3263 - PAS/PAC sensor hybrid histidine kinase 3257 60.06 0 3921262..3924666 + 1134 158523274 - Dole_3264 - PAS/PAC sensor hybrid histidine kinase 3258 59.20 0 3924682..3928002 + 1106 158523275 - Dole_3265 - PAS/PAC sensor hybrid histidine kinase 3259 58.56 0 3928184..3930676 + 830 158523276 - Dole_3266 - putative PAS/PAC sensor protein 3260 57.63 0 3930742..3934284 + 1180 158523277 - Dole_3267 - PAS/PAC sensor hybrid histidine kinase 3261 56.23 0 3934266..3937505 + 1079 158523278 - Dole_3268 - PAS/PAC sensor hybrid histidine kinase 3262 49.79 -1 3937669..3937905 + 78 158523279 - Dole_3269 - hypothetical protein 3263 58.42 0 3937925..3939622 + 565 158523280 - Dole_3270 - histidine kinase 3264 56.75 0 3939670..3940032 + 120 158523281 - Dole_3271 - response regulator receiver protein 3265 58.19 0 3940172..3943060 + 962 158523282 - Dole_3272 - PAS/PAC sensor hybrid histidine kinase 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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