version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 269 55.16 0 308652..308903 + 83 158520286 - Dole_0269 - hypothetical protein 270 57.71 0 308974..309252 + 92 158520287 - Dole_0270 - hypothetical protein 271 61.15 0 309555..310406 + 283 158520288 - Dole_0271 - 3-hydroxybutyryl-CoA dehydrogenase 272 58.19 0 310421..310597 + 58 158520289 - Dole_0272 - hypothetical protein 273 59.92 0 310875..311600 - 241 158520290 - Dole_0273 - integral membrane protein TerC 274 48.01 -1 312270..314300 + 676 158520291 - Dole_0274 - radical SAM domain-containing protein 275 34.69 -2 314319..316082 + 587 158520292 - Dole_0275 - TPR repeat-containing protein 276 49.94 -1 316441..318150 + 569 158520293 - Dole_0276 - N-6 DNA methylase 277 42.59 -2 318150..319391 + 413 158520294 - Dole_0277 - restriction modification system DNA specificity subunit 278 48.99 -1 319388..322357 + 989 158520295 - Dole_0278 - hypothetical protein 279 43.49 -2 322487..323608 + 373 158520296 - Dole_0279 - hypothetical protein 280 42.88 -2 323605..324348 + 247 158520297 - Dole_0280 - Gp37Gp68 family protein 281 53.37 0 325517..326140 + 207 158520298 - Dole_0281 - hypothetical protein 282 52.38 0 326227..327066 + 279 158520299 - Dole_0282 - hypothetical protein 283 52.35 0 327183..328139 + 318 158520300 - Dole_0283 - hypothetical protein 284 45.31 -1 328213..328404 + 63 158520301 - Dole_0284 - hypothetical protein 285 49.40 -1 328431..328598 + 55 158520302 - Dole_0285 - hypothetical protein 286 52.60 0 328964..329290 + 108 158520303 - Dole_0286 - HIRAN 287 48.68 -1 329447..330964 + 505 158520304 - Dole_0287 - hypothetical protein 288 45.13 -1 331373..332584 + 403 158520305 - Dole_0288 - integrase family protein 289 60.58 0 332755..333066 - 103 158520306 - Dole_0289 - hypothetical protein 290 57.92 0 333067..333672 - 201 158520307 - Dole_0290 - phosphoserine phosphatase 291 61.20 0 333695..335011 - 438 158520308 - Dole_0291 - homoserine dehydrogenase 292 57.82 0 335021..336196 - 391 158520309 - Dole_0292 - aminotransferase class I and II 293 57.06 0 336565..337605 + 346 158520310 - Dole_0293 - phosphoribosylformylglycinamidine cyclo-ligase 294 63.07 +1 337944..339026 + 360 158520311 - Dole_0294 - metalloendopeptidase glycoprotease family 295 62.02 0 339512..340543 - 343 158520312 - Dole_0295 - Beta-N-acetylhexosaminidase 296 60.63 0 340580..341374 - 264 158520313 - Dole_0296 - hypothetical protein 297 54.05 0 341403..342242 - 279 158520314 - Dole_0297 - FkbM family methyltransferase 298 59.04 0 342744..343412 + 222 158520315 - Dole_0298 - hydrogenase accessory protein HypB 299 62.43 +1 343453..344301 + 282 158520316 - Dole_0299 - hypothetical protein 300 61.80 0 344402..345388 + 328 158520317 - Dole_0300 - iron-sulfur cluster-binding protein 301 56.99 0 345388..345852 + 154 158520318 - Dole_0301 - hypothetical protein 302 56.10 0 346015..347349 - 444 158520319 - Dole_0302 - hypothetical protein 303 56.05 0 347399..348076 - 225 158520320 - Dole_0303 - hypothetical protein 304 59.18 0 348093..349361 - 422 158520321 - Dole_0304 - hypothetical protein 305 60.32 0 349426..350103 - 225 158520322 - Dole_0305 - cytochrome c class III 306 62.42 +1 350375..351739 + 454 158520323 - Dole_0306 - electron transport complex, RnfABCDGE type, C subunit 307 63.21 +1 351770..352783 + 337 158520324 - Dole_0307 - electron transport complex, RnfABCDGE type, D subunit 308 56.33 0 352828..353427 + 199 158520325 - Dole_0308 - FMN-binding domain-containing protein 309 57.53 0 353467..354090 + 207 158520326 - Dole_0309 - RnfA-Nqr electron transport subunit 310 56.64 0 354109..354876 + 255 158520327 - Dole_0310 - RnfA-Nqr electron transport subunit 311 62.39 0 354914..355825 + 303 158520328 - Dole_0311 - electron transport complex, RnfABCDGE type, B subunit 312 49.35 -1 356308..356538 + 76 158520329 - Dole_0312 - hypothetical protein 313 62.42 +1 356639..358735 + 698 158520330 - Dole_0313 - molybdopterin oxidoreductase 314 58.08 0 359227..361020 - 597 158520331 - Dole_0314 - AMP-dependent synthetase and ligase 315 62.07 0 361148..361930 - 260 158520332 - Dole_0315 - TatD family hydrolase 316 59.29 0 362111..362950 + 279 158520333 - Dole_0316 - ferredoxin--NADP(+) reductase subunit alpha 317 62.70 +1 362964..364373 + 469 158520334 - Dole_0317 - glutamate synthase (NADPH), homotetrameric 318 56.60 0 364570..364887 - 105 158520335 - Dole_0318 - NifU domain-containing protein 319 54.76 0 365131..365466 + 111 158520336 - Dole_0319 - hypothetical protein 320 61.88 0 365851..366351 - 166 158520337 - Dole_0320 - hypothetical protein 321 58.84 0 366345..366842 - 165 158520338 - Dole_0321 - signal peptidase I 322 57.55 0 367112..368317 + 401 158520339 - Dole_0322 - TPR repeat-containing protein 323 59.62 0 368475..369113 + 212 158520340 - Dole_0323 - TPR repeat-containing protein 324 64.27 +1 369395..369853 - 152 158520341 - Dole_0324 - phosphodiesterase 325 62.11 0 370335..371519 + 394 158520342 - Dole_0325 - diguanylate cyclase 326 53.76 0 371538..372149 - 203 158520343 - Dole_0326 - antibiotic biosynthesis monooxygenase 327 58.89 0 373133..374032 + 299 158520344 - Dole_0327 - exopolyphosphatase-related protein 328 58.64 0 374161..376653 - 830 158520345 - Dole_0328 - Ig domain-containing protein 329 59.01 0 376692..379655 - 987 158520346 - Dole_0329 - type IV pilus secretin PilQ 330 59.63 0 379659..380639 - 326 158520347 - Dole_0330 - hypothetical protein 331 50.47 -1 380636..381271 - 211 158520348 - Dole_0331 - pilus assembly protein PilO 332 51.93 0 381283..381825 - 180 158520349 - Dole_0332 - fimbrial assembly family protein 333 52.18 0 381822..382877 - 351 158520350 - Dole_0333 - type IV pilus assembly protein PilM 334 52.29 0 382887..383039 - 50 158520351 - Dole_0334 - XRE family transcriptional regulator 335 64.19 +1 383454..384140 + 228 158520352 - Dole_0335 - hypothetical protein 336 57.00 0 384318..385310 - 330 158520353 - Dole_0336 - beta-lactamase domain-containing protein 337 59.63 0 385983..387716 + 577 158520354 - Dole_0337 - AMP-dependent synthetase and ligase 338 52.80 0 388370..388780 - 136 158520355 - Dole_0338 - hypothetical protein 339 60.66 0 388984..390264 + 426 158520356 - Dole_0339 - phosphopyruvate hydratase 340 59.57 0 390277..391122 + 281 158520357 - Dole_0340 - hypothetical protein 341 60.29 0 391138..392799 + 553 158520358 - Dole_0341 - CTP synthetase 342 58.68 0 392810..393523 + 237 158520359 - Dole_0342 - ferric uptake regulator family protein 343 56.96 0 393693..393929 + 78 158520360 - Dole_0343 - FeoA family protein 344 58.90 0 393936..396110 + 724 158520361 - Dole_0344 - ferrous iron transport protein B 345 47.85 -1 396241..396867 + 208 158520362 - Dole_0345 - metallophosphoesterase 346 55.56 0 396889..397338 + 149 158520363 - Dole_0346 - hypothetical protein 347 61.61 0 397460..398983 - 507 158520364 - Dole_0347 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 348 62.51 +1 399063..399977 - 304 158520365 - Dole_0348 - hypothetical protein 349 58.40 0 400007..401977 - 656 158520366 - Dole_0349 - cyclopropane-fatty-acyl-phospholipid synthase 350 59.59 0 401974..403245 - 423 158520367 - Dole_0350 - amine oxidase 351 55.72 0 403266..403676 - 136 158520368 - Dole_0351 - hypothetical protein 352 58.91 0 403690..404475 - 261 158520369 - Dole_0352 - hypothetical protein 353 60.72 0 404494..405888 - 464 158520370 - Dole_0353 - major facilitator transporter 354 56.68 0 405885..406475 - 196 158520371 - Dole_0354 - hypothetical protein 355 51.28 0 406920..407231 + 103 158520372 - Dole_0355 - hypothetical protein 356 59.89 0 407493..408407 + 304 158520373 - Dole_0356 - ArsR family transcriptional regulator 357 58.23 0 408827..410095 + 422 158520374 - Dole_0357 - adenosylhomocysteinase 358 58.76 0 410474..411991 + 505 158520375 - Dole_0358 - apolipoprotein N-acyltransferase 359 58.17 0 411968..413062 - 364 158520376 - Dole_0359 - hypothetical protein 360 56.33 0 413137..414036 - 299 158520377 - Dole_0360 - alpha/beta fold family hydrolase 361 55.08 0 414248..416293 + 681 158520378 - Dole_0361 - Fis family transcriptional regulator 362 65.44 +1 416327..417550 + 407 158520379 - Dole_0362 - major facilitator transporter 363 53.76 0 417621..420425 - 934 158520380 - Dole_0363 - parallel beta-helix repeat-containing protein 364 57.04 0 420485..421813 - 442 158520381 - Dole_0364 - hypothetical protein 365 58.16 0 422177..423046 + 289 158520382 - Dole_0365 - radical SAM domain-containing protein 366 56.48 0 423151..423582 + 143 158520383 - Dole_0366 - S23 ribosomal protein 367 60.52 0 423656..425671 + 671 158520384 - Dole_0367 - transketolase 368 60.39 0 425698..426462 + 254 158520385 - Dole_0368 - methyltransferase type 11 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0